LOC122328180


Basic Information

Item Value
gene id LOC122328180
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 7629947 ~ 7631701 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223883.1
TTTTAAGCTCAGTAGTTGATGCTTGAATCATTTAAACCTTTGACCTTAAAATAGTGCATAGTATATCTTTGGATTTGATCTTACTTCCATGAAAGGTTTGTCTTTTCCGTCATTgtagattatattttattgcatgctTAATTCCCGATCCAGCCTCACCTACAACTGAAGCattttttgacttatttttctCTTGAGTGttcatgtaaacatttaaaagcatctttGTAGACTAGAAGTTTATATTTGATCATGTTAAtcataattgttttctttttcattgaaGAGAATCTGTGCACATTGTGAACTCAGAAGATGACATCGAAGACATCGAAAGAATTGTTACGAAAAGTACATGAATTTGTGAAAGGAACTGCTACTTTTCCATTGAGTCTTTTGTTAATCGGAGTGGAGAAGCTGATTGAAGTGGAATTTTTTTCATGTCCATGCAGAGTTGAGCAGAATGCACTGCTGACATCATCTGTCTTCATTGGacctgctctttttcttttcactttaatGCATCTTGTTTTTAGACCTTTTAGATATGGATGCAGCAGCTGTGGAGGTGCGAATCATAACAATCAGCCTAATGATTCTCAGCAGAGTTCAGCAGACAATGCTCAGAGTACTAAAACTCAAAGCTGTCCTAAAGCTTTTGCATCTTGTCTGATTCCACCTGTCATCTGGATCTTCATCTTGTTACTTGATGGTGAATATGTTGCTTGCAGCATGACAGACTGGAAAGGAGTTTATGTGTTTGATCAGGAGCTCAACAAGTTCTGGTGTAATCCTACCGAAAAGATCCAAAATGTAACGGAGCTACGAGATTTGACTCACAGTTACATTCATCAGTCGCAGTTTTCTCAGTATGCAGGTTACATCTTGATCTCTGTCTTCAGTGCACTGACGTTTGTCTTTGTGAGTATTCACGACTGCTGCATTAGTGGAAAATGTGCCGATTACTGTCCAGATCAACTGTTATGCTGCAGACAAACTACGGAGACACAAAGCTCCTCCTCAGGTCACCGTCCAACTCCGTCCTCCTCAGTTCCAAGTCCAACTCAGTCCTCCTCAGGTCAGCATCCAACTCCATCCTCCTCAGTTCCAAGTCAAACTCCGTCCTCCTCAGTTCCAAGTCAAACTCCTTCCTCCTCAGTACCCAGTCCAACTCCGTCCTCCTCAGGTCAGAATCCAACTCTCGTCCTCCTCAGGTCAAATTATTACTCCATCCTCCTCAGGTCAGCGCCCCCTCCATCCTCCTCAGGTCAGCGTCCAACTCCGTCCTCCTCAGGTAGGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223883.1 True 1302 mRNA 0.42 2 7629947 7631701

Neighbor

gene id symbol gene type direction distance location
LOC122327777 NA coding downstream 7508 7619350 ~ 7622439 (-)
si:ch211-246m6.5 si:ch211-246m6.5,LOC107751466,LOC107656682,LOC107600990,LOC107739341,LOC107653538 coding downstream 28867 7548350 ~ 7601080 (-)
si:ch211-246m6.4 si:ch211-246m6.4,LOC107656681,LOC107751464,LOC107565497,LOC107739350,LOC107600989,LOC107653571,LOC107600970 coding downstream 87887 7537637 ~ 7542060 (-)
LOC122327064 LOC107751463,LOC107571702,LOC107687862,LOC107687887,LOC107739318,LOC107653569,LOC107565490,LOC107600988 coding downstream 104330 7524436 ~ 7525617 (-)
LOC122327123 LOC107687862,LOC107565490,LOC107751463,LOC107687887,LOC107571702,LOC107739318,LOC107653569,LOC107687863 coding downstream 107055 7521718 ~ 7522892 (-)
si:dkeyp-122a9.2 NA coding upstream 27632 7659333 ~ 7661731 (-)
lrp1ba lrp1ba,LOC107757468,LOC107653541 coding upstream 30087 7661788 ~ 7889885 (-)
elfn2a elfn2,LOC107665513,LOC107715073,LOC107757469,LOC107600993,LOC107653611,LOC107561914,LOC103909578 coding upstream 338644 7970345 ~ 8065690 (-)
mfng LOC107561915,LOC107715074,LOC107653613,LOC107757470,LOC107665528,LOC107600994 coding upstream 451739 8083440 ~ 8096442 (-)
LOC122328182 patj,LOC107669802,LOC107731530,LOC107715056,LOC107653652,LOC107588105 coding upstream 528727 8160428 ~ 8166968 (-)
LOC122327778 NA non-coding downstream 1096 7624699 ~ 7628851 (-)
G150628 NA non-coding downstream 131458 7486176 ~ 7498489 (-)
G150626 NA non-coding downstream 145013 7483864 ~ 7484934 (-)
LOC122327668 arl4ca,arl4c,LOC107600967,LOC107739351,LOC105905671,LOC106575223 non-coding downstream 159803 7450248 ~ 7470144 (-)
G150596 NA non-coding downstream 206548 7409413 ~ 7423399 (-)
LOC122328071 NA non-coding upstream 15410 7647111 ~ 7652174 (-)
G150706 NA non-coding upstream 226622 7858323 ~ 7866902 (-)
LOC122327072 NA non-coding upstream 268887 7900588 ~ 7952064 (-)
G150735 NA non-coding upstream 434131 8065832 ~ 8066111 (-)
G150786 LOC107665518,LOC107561911 non-coding upstream 479114 8110815 ~ 8259777 (-)
LOC122327776 LOC107751486,LOC107656680,LOC107565498,LOC107653539,LOC107715642,LOC107600957,LOC107751482 other downstream 11549 7609856 ~ 7618398 (-)
LOC122327113 ahr1b,LOC107586968,LOC107687868,LOC107751479,LOC107653601,LOC107739322,LOC107600975,LOC108410580 other downstream 574385 7020754 ~ 7055562 (-)
G150492 ahr1b,LOC107653601,LOC107600975,LOC107751479,LOC107687868,LOC107586968,LOC107739322 other downstream 716389 6906000 ~ 6913558 (-)
nab1a nab1a,LOC107687893,LOC107653562,LOC107739354,LOC107754250,LOC107600950 other downstream 740290 6846890 ~ 6889657 (-)
tmem264 tmem264,LOC107715063,LOC107757465,LOC107665501,LOC107653574,LOC107588123,LOC107561895 other upstream 654671 8286372 ~ 8293208 (-)
zbtb37 zbtb37,LOC107588063,LOC107757486,LOC107653628,LOC107669814,LOC107715095,LOC107592718,LOC107592717,LOC107669813,LOC107715094,LOC107757485,LOC107588062,LOC107653629 other upstream 968649 8600350 ~ 8612744 (-)
G151107 tal1,LOC107669848 other upstream 1252420 8884121 ~ 8886941 (-)
nfia nfia,LOC107592693,LOC107599440,LOC107653654 other upstream 1381847 9013548 ~ 9171931 (-)
gpx4a gpx4a,LOC108429535 other upstream 1866968 9498669 ~ 9503006 (-)

Expression


Co-expression Network