tssk6 (tssk6,LOC107687737,LOC107728539,LOC107554804,LOC107599475,LOC107719648)


Basic Information

Item Value
gene id tssk6
gene name tssk6,LOC107687737,LOC107728539,LOC107554804,LOC107599475,LOC107719648
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 9994192 ~ 9995007 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223898.1
ATGTCTGTTAATAACGTTTTGAAGGGAATGGGCTACAAGATCATAACCGAGATTGGTGAAGGCAGTTTTTCCCAAGTCAAGCTCGCCACTTCGCAGAAGCACCACTGTAACGTGGCCATCAAAATTGTGGACCGTGTGAATGCCCCTAAGGATTTTGTCCAGAAGTTTCTTCCAAGGGAACTGGCGATTTTGAGACGAGTCAATCACGAGCACATCGTGCAAATGCACGAGCTGATTGAGGTGGCTGGTAAACGACTTTGTATTGTGATGGAAGCTGCAGCAAAAGATCTCCTTCAGAAGATACAAGAAGTGAAACGCATCTCAGAAGAACAAAGTAAAAACTTGTTCTCTCAGATGGTCAGTGCCATCAACTACCTCCACCAGTTGGACATCATCCATCGGGACCTCAAGTGCGAAAACGTGCTTCTGACAGCCGAAGAACAAGTCAAGGTCACGGACTTCGGTTTCGCCCGCTGTGTTCAAAATCCTTCAGAGCTCAGTCAGACCTTCTGTGGTTCTGCAGCCTATACTCCACCAGAAGTCATCATGGGAATGCCGTATGACCCAAAAAAGTACGACATATGGAGCCTTGGGGTGATTCTGTACGTCATGGTTACTGGATCGATGCCATACGACGATACCAACTTGAGGCGACTTAACCGTCTTCAACGAAGGTCTTTAGTTTTTCCGGATGACGCTGGTGTTCAGGAACCATGCCAGGTCTTCGTCCGTACCCTGCTCCAGTTCAATCCTTCCACACGCCCAACCATTCAGCAGGTGGGAGAACATCCGTGGATGCAGAAGGGAAAAAGCTAA

Function

symbol description
tssk6 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and protein phosphorylation. Predicted to act upstream of or within phosphorylation. Orthologous to human TSSK6 (testis specific serine kinase 6).

NR:

description
testis-specific serine/threonine-protein kinase 6-like

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08811 TSSK, STK22; testis-specific serine kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223898.1 True 816 mRNA 0.48 1 9994192 9995007

Neighbor

gene id symbol gene type direction distance location
tmem161a tmem161a,LOC107728546,LOC107599454,LOC107719614,LOC107554814,LOC107687722 coding downstream 75276 9913423 ~ 9918916 (-)
tmem221 NA coding downstream 99225 9890550 ~ 9894967 (-)
rfxank rfxank,LOC107687741,LOC107554808,LOC107728547,LOC107719616,LOC107599486 coding downstream 106333 9886173 ~ 9887859 (-)
LOC122328188 ncan,ncanb,LOC107728538,LOC107687726,LOC107554802,LOC107719650,LOC107599474,LOC107097932 coding downstream 205817 9730641 ~ 9788375 (-)
LOC122328187 ncan,ncanb,LOC107728538,LOC107554802,LOC107687726,LOC107599474,LOC107719650 coding downstream 305052 9686468 ~ 9689140 (-)
si:ch211-212d10.2 si:ch211-212d10.2,LOC107728577,LOC107687719,LOC106613739,LOC101487565 coding upstream 49215 10044222 ~ 10047874 (-)
cirbpb LOC107599461,LOC107655227,LOC107719610 coding upstream 80025 10075032 ~ 10080097 (-)
midn LOC107554818,LOC107728568,LOC107687715,LOC107655225,LOC107719606 coding upstream 156455 10151462 ~ 10173317 (-)
atp5f1d atp5d,LOC107728581,LOC107719603,LOC107554819,LOC107569937 coding upstream 188031 10183038 ~ 10187587 (-)
LOC122328192 NA coding upstream 399005 10394012 ~ 10396169 (-)
LOC122327858 NA non-coding downstream 128304 9819693 ~ 9865888 (-)
G151319 hapln4,LOC107554801,LOC107728536,LOC107719665,LOC107599484 non-coding downstream 373027 9616790 ~ 9621165 (-)
G151289 NA non-coding downstream 529679 9426153 ~ 9464513 (-)
G151266 NA non-coding downstream 539845 9360531 ~ 9454347 (-)
G151444 NA non-coding upstream 28211 10023218 ~ 10028439 (-)
G151439 NA non-coding upstream 58911 10053918 ~ 10072892 (-)
G151468 LOC107687734,LOC107728578,LOC107719602,LOC107655224,LOC107569929 non-coding upstream 194823 10189830 ~ 10194857 (-)
G151457 NA non-coding upstream 249911 10244918 ~ 10249842 (-)
G151507 NA non-coding upstream 380166 10375173 ~ 10375615 (-)
G151425 NA other downstream 11045 9957811 ~ 9983147 (-)
gpx4a gpx4a,LOC108429535 other downstream 491186 9498669 ~ 9503006 (-)
nfia nfia,LOC107592693,LOC107599440,LOC107653654 other downstream 822261 9013548 ~ 9171931 (-)
G151107 tal1,LOC107669848 other downstream 1107251 8884121 ~ 8886941 (-)
zbtb37 zbtb37,LOC107588063,LOC107757486,LOC107653628,LOC107669814,LOC107715095,LOC107592718,LOC107592717,LOC107669813,LOC107715094,LOC107757485,LOC107588062,LOC107653629 other downstream 1381448 8600350 ~ 8612744 (-)
polrmt LOC107687709,LOC107728563,LOC107569934,LOC107655172,LOC107719647,LOC107569035,LOC101483880 other upstream 287015 10282022 ~ 10321663 (-)
micos13 si:dkey-78l4.14,LOC107596903,LOC107719663,LOC107586453,LOC107675912,LOC107655188 other upstream 424120 10419127 ~ 10422354 (-)
oaz1a oaz1a,oaz1s,oaz1,LOC107719576,LOC107655198,LOC107586434 other upstream 940045 10935052 ~ 10994952 (-)
rex1bd si:ch211-87h14.3,clg08h19orf60,cssa23h19orf60,LOC107676986,LOC107729673,LOC107593355,LOC107719569,LOC108439285,LOC103025814 other upstream 1179136 11174143 ~ 11188692 (-)
cks2 cks2,LOC107699408,LOC107593315,LOC107729701,LOC103026129,LOC108230759,LOC105927846,LOC106584418 other upstream 1234967 11229974 ~ 11231249 (-)

Expression


Co-expression Network