LOC122328190 (LOC107728585,LOC107675904,LOC107726539,LOC107675906,LOC107569043,LOC107728545)


Basic Information

Item Value
gene id LOC122328190
gene name LOC107728585,LOC107675904,LOC107726539,LOC107675906,LOC107569043,LOC107728545
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 10385363 ~ 10392871 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223899.1
AAAAGGCTTGCAAGCAGCTCGGTGTCTCCACCCGTCCTTGAATTTATATAGTGTTGGCCAGTAAGAGCCTACTGATTGTCTTGAGCCACCTGACCTTCGCTGtgttAGTCAGCGAGAGCTCACTGATTGTCTTCAAGATGACCATCATCTCTCTGCTCCTCCTGATCTCTCTGCTTCCACACCTGACCTTTACTGctcGTGTGAAGGTGGGGATAGTGAACGGCAAGGAAGCAAAACCCCACTCCAGACCTTACATGGTTTCTCTTCAGAAGAACTTTAAACACATCTGTGGTGGATTCCTCATCTCTGATGAGTTTGTCATGACTGCTGCACACTGCTGGAAAGGaTACCCAAGTATTCTGACGGCTGTGGTCGGTGCTCATGACTTAAGGAACTGTAATCGTTCATGCAGTGTTGAAGTGATGTCCTACATCCCACATCCATACTATACAATCTGTTCACGTCAGAATGATATCATGCTTTTGAGGCTACAAGAAAAGGTCAAACTAAACAACTATGTTAAATGGATATCGTTAACGAAGAAAGGAGATGTTAATGGAGGCACTCTCTGTAATGTTGCTGGCTGGGGAAGACTGTCGACTGATGGCACACTGAGCAGTGTTTTAATGGAGGCAAACATGACTACAATAAACCAAAGGGAGTGTCTGCATAAATGGGGATCAAAATACTCTGCCTCACAGATGATCTGTGCACATGGTCGTGGAGGATCCTGCAAAGGAGACTCTGGAGGTCCGCTGGTTTGTGGAGACACTGCAGTTGGTGTCACATCTTTTGGGTCCGGAATACGCTGCAATTCACCTGACTATCCTAATGTCTATACTGAGATTTCAGCATTTCTTCCATGGATTCAACAAATTATTcgaaTGTTTGTAAGTGATAGCCTACCGATAGTCTTCATCATGAACATCATCTCTCTGCTCCTGCTGGTCACTCTGCTGCCAAACTTGACATTCACTGttcatGTGAAGGGGGGTATAGTGAACGGCACAGAAGTAAAACCCCACTCCAGACCTTTCATGGTTTCTCTTCAGAAGAACTGGAGACATGTCTGTGGTGGATTCCTCATCTCTGATAGATTTGTTATGACTGCTGCACACTGCTGGAAAAATGAGAAACTAACGGTAGTGGTTGGTGCACACGACTTAAGACAGGACGACAAATCTGTCCGCATTGGTGTGAAGTCCTACCACGTGCATCCAAAATTCAACAAGCACACTTTGCAGAACGACATTATAATTTTGAGGCTGGAGAAAGAAGTCGAACAAAACAAGAATGTAATGAAGATTTCCATATcaaaaaatgagagagagatggaagCTGGTTCTGTCTGCAGTGTAGCTGGCTGGGGAAGACTGAGCTTTAACGGGAGAAAGAGTTATCGTCTCATGGAAGCAGATGTGAAGATCATGAATAACactgaatgcaaaaataaatggaatgACAACTTTTTAGCCCCAGAGATGATGTGTGTCTATGGCCACGGAGGAAGCTGTAAGGAGGATGGAGGAGGTCCTTTGGTTTGTAAAGACACTGCAGTCGGTGTCACTTCCTTTGGTGACCCAGAAATCTGCAATAATCCTGAACGACCTGTAGTTTATATAAAGATTTCTGCATATATTCCATGGATCTGCTCTGTTATTCAAAATGTTGAGTGATTTTTACAATGAAACATAATGAAGCCTTTGTTTAAATGTTCAATAAACAA

Function

NR:

description
PREDICTED: mast cell protease 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223899.1 True 1726 mRNA 0.44 11 10385363 10392871

Neighbor

gene id symbol gene type direction distance location
LOC122327872 LOC107728585,LOC107675904,LOC107726539,LOC107675906,LOC107569043 coding upstream 2584 10381507 ~ 10382779 (+)
LOC122328210 LOC107728584 coding upstream 6673 10376708 ~ 10378690 (+)
LOC122328213 NA coding upstream 11237 10372204 ~ 10374126 (+)
LOC122328214 NA coding upstream 14850 10369095 ~ 10370513 (+)
LOC122328211 NA coding upstream 23154 10360126 ~ 10362209 (+)
LOC122327181 NA coding downstream 5398 10398269 ~ 10399548 (+)
LOC122327821 LOC107726539,LOC107728585,LOC107675904 coding downstream 7555 10400426 ~ 10401727 (+)
LOC122327820 LOC107675898,LOC107726531 coding downstream 14274 10407145 ~ 10408483 (+)
LOC122328194 NA coding downstream 17386 10410257 ~ 10412454 (+)
LOC122328195 LOC107726533,LOC107596895 coding downstream 20478 10413349 ~ 10418216 (+)
G151487 NA non-coding upstream 36477 10347829 ~ 10348886 (+)
G151382 NA non-coding upstream 196191 10188578 ~ 10189172 (+)
G151373 NA non-coding upstream 197780 10185635 ~ 10187583 (+)
G151345 LOC107655225,LOC107554818,LOC107728568,LOC107687715,LOC107599463 non-coding upstream 222917 10151480 ~ 10162446 (+)
LOC122327864 NA non-coding upstream 245209 10137300 ~ 10140154 (+)
G151592 NA non-coding downstream 273185 10666056 ~ 10669212 (+)
LOC122327757 creb3l3a,LOC107729712,LOC107675914,LOC107596868,LOC107655213,LOC107719590,LOC107586456 non-coding downstream 308751 10701622 ~ 10709755 (+)
LOC122328232 NA non-coding downstream 316173 10709044 ~ 10709110 (+)
G151603 NA non-coding downstream 317642 10710513 ~ 10711972 (+)
G151624 mbd3,LOC108427158 non-coding downstream 384856 10777727 ~ 10840314 (+)
gatad2ab gatad2ab,gatad2a,LOC107599456,LOC107728574,LOC107554816 other upstream 391922 9970622 ~ 9993441 (+)
LOC122328159 NA other upstream 421729 9923547 ~ 9963634 (+)
mef2b LOC107687723,LOC107554810,LOC107728551,LOC107719669,LOC107655235,LOC107599488 other upstream 474570 9895441 ~ 9910793 (+)
borcs8 borcs8,LOC107728595,LOC107554813,LOC107599453 other upstream 491856 9888163 ~ 9893507 (+)
G151232 NA other upstream 805212 9577679 ~ 9580151 (+)
G151620 NA other downstream 413181 10806052 ~ 10837365 (+)
onecut3a onecut3,onecut3a,LOC107596910,LOC107676954,LOC107586457,LOC107719659,LOC107655183,LOC105938949 other downstream 481557 10874428 ~ 10892023 (+)
si:dkey-172o19.2 LOC107729689,LOC107676945,LOC107596881,LOC107719578 other downstream 525218 10918089 ~ 10922031 (+)
peak3 LOC107676959,LOC107729697,LOC107593354,LOC107655164,LOC107586433,LOC107719638,LOC107593339 other downstream 542164 10935035 ~ 10994944 (+)
mier2 LOC107729715,LOC107593358,LOC107676949,LOC107699399,LOC107719562,LOC107586401 other downstream 925236 11318107 ~ 11328230 (+)

Expression


Co-expression Network