LOC122328192


Basic Information

Item Value
gene id LOC122328192
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 10394012 ~ 10396169 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223900.1
ATGGCCATCATCTCTCTGCTCCTGCTGATCTCTCTGCTTCCACACCTGACCTTCACCGCTCTTGTAAATGTGGATATAGTAAATGGCCAGAAAGCAGAAGCTCACTCCAGACCTTACATGGTTTCTCTTCAGAAGAACAAGGAACACATCTGTGGTGGATTTCTCATTCACAACCAGTTTGTCTAGACTGCTGCAcattgcagaaataaataagactTTAGCAGTATACTGACAGCTGTGATTGGGGCACATAACCTAAAAGACAAGAACGAGGGGTCTGTCCGCTTCGGAGTGAAGTCCTACCACAAGCATCCAGGTTACAGACCTAAGAGTCACACATACCAGAATGACATTATGCTTTTGAGGCTGCAGAAAAAAGTCAAGGAAAACAGTAAAGTcaagattattaaaatacaaacacaaaaggaagacATCAAAGCCGATTCTGCCTGCAGAGTCGCCGTCTGGGGAAGCCTGAGGACTAATGGCTCAGCAAATGATCGTCTAATGAAGATGAGGGTGTATGTAATGGATAACGCAGAATGCAAAATCAGATGGGGAGAGATCTACTCGATCCCGAAGATGATGTGTACATATGGCATTGGTGGATTCTGCGACCCTACATTCACAGTGCGCTACACAGTATTTAACacagaataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223900.1 True 660 mRNA 0.44 5 10394012 10396169

Neighbor

gene id symbol gene type direction distance location
atp5f1d atp5d,LOC107728581,LOC107719603,LOC107554819,LOC107569937 coding downstream 206425 10183038 ~ 10187587 (-)
midn LOC107554818,LOC107728568,LOC107687715,LOC107655225,LOC107719606 coding downstream 220695 10151462 ~ 10173317 (-)
cirbpb LOC107599461,LOC107655227,LOC107719610 coding downstream 313915 10075032 ~ 10080097 (-)
si:ch211-212d10.2 si:ch211-212d10.2,LOC107728577,LOC107687719,LOC106613739,LOC101487565 coding downstream 346138 10044222 ~ 10047874 (-)
tssk6 tssk6,LOC107687737,LOC107728539,LOC107554804,LOC107599475,LOC107719648 coding downstream 399005 9994192 ~ 9995007 (-)
LOC122327734 celf5a,celf5,LOC107675909 coding upstream 70958 10467127 ~ 11650822 (-)
zgc:165603 celf5a,LOC107719642,LOC107655216 coding upstream 230617 10626786 ~ 10650952 (-)
rxfp3.2b rxfp3.2b,LOC107729713,LOC107719591,LOC107675915,LOC107586455,LOC107596869,LOC107655214,LOC108435892 coding upstream 292837 10689006 ~ 10692778 (-)
creb3l3a creb3l3a,LOC107675914,LOC107719590,LOC107729712,LOC107586456,LOC107655213,LOC107596868 coding upstream 300188 10696357 ~ 10702574 (-)
btbd2a btbd2,btbd2a,LOC107719589,LOC107675907,LOC107586379,LOC107655211,LOC108435919 coding upstream 314401 10710570 ~ 10715160 (-)
G151508 NA non-coding downstream 18052 10375641 ~ 10375960 (-)
G151507 NA non-coding downstream 18397 10375173 ~ 10375615 (-)
G151457 NA non-coding downstream 144170 10244918 ~ 10249842 (-)
G151468 LOC107687734,LOC107728578,LOC107719602,LOC107655224,LOC107569929 non-coding downstream 199155 10189830 ~ 10194857 (-)
G151439 NA non-coding downstream 321120 10053918 ~ 10072892 (-)
G151569 NA non-coding upstream 46318 10442487 ~ 10442738 (-)
G151572 NA non-coding upstream 59202 10455371 ~ 10455631 (-)
G151612 NA non-coding upstream 313033 10709202 ~ 10709750 (-)
G151616 NA non-coding upstream 319256 10715425 ~ 10715957 (-)
G151668 NA non-coding upstream 387469 10783638 ~ 10784242 (-)
polrmt LOC107687709,LOC107728563,LOC107569934,LOC107655172,LOC107719647,LOC107569035,LOC101483880 other downstream 72349 10282022 ~ 10321663 (-)
G151425 NA other downstream 410865 9957811 ~ 9983147 (-)
gpx4a gpx4a,LOC108429535 other downstream 891006 9498669 ~ 9503006 (-)
nfia nfia,LOC107592693,LOC107599440,LOC107653654 other downstream 1222081 9013548 ~ 9171931 (-)
G151107 tal1,LOC107669848 other downstream 1507071 8884121 ~ 8886941 (-)
micos13 si:dkey-78l4.14,LOC107596903,LOC107719663,LOC107586453,LOC107675912,LOC107655188 other upstream 22958 10419127 ~ 10422354 (-)
oaz1a oaz1a,oaz1s,oaz1,LOC107719576,LOC107655198,LOC107586434 other upstream 538883 10935052 ~ 10994952 (-)
rex1bd si:ch211-87h14.3,clg08h19orf60,cssa23h19orf60,LOC107676986,LOC107729673,LOC107593355,LOC107719569,LOC108439285,LOC103025814 other upstream 777974 11174143 ~ 11188692 (-)
cks2 cks2,LOC107699408,LOC107593315,LOC107729701,LOC103026129,LOC108230759,LOC105927846,LOC106584418 other upstream 833805 11229974 ~ 11231249 (-)
gna11a LOC107717982,LOC107676956,LOC107586405,LOC107699416,LOC107719558 other upstream 1069683 11465852 ~ 11490654 (-)

Expression


Co-expression Network