LOC122328195 (LOC107726533,LOC107596895)


Basic Information

Item Value
gene id LOC122328195
gene name LOC107726533,LOC107596895
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 10413349 ~ 10418216 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223903.1
GGAAGTATGAGTGTTACTGGGGGGCTAAAGCAGCCCACTTTGCATTAAAACCACCATCAACAGCAGTGAGATCTTCTTAAGAAGCCTTCCAACTAGAGCATCATGAACATCTCCGTGTTTTTGCTCGTCACCCTACTACCATATATGACCATGCAAGCATCTGTGCAGGTGGGTATAGTGAACGGCACAGAAGCCAAACCTCATTCAAGACCCTACATGGtttcaattcaaataaataagataCACAGATGCGGTGGCTTTCTTGTGTCTGAACAGTTCGTCATGACTGCTGCGCACTGCTTTCAAAAAGAAGCGAAGCTTACAGTTGTGGTTGGAGCTCATGATTACACTCAAGGCTCTGGCCTCATGGATGTGAAGTTCTACCACATCCACCCTGGGTATACACCCGAAACTCTGCTGAATGACATCATGCTGCTTCAGCTATACGGAAAAGTCAAAAAGAACAAGAAGGTCAACTGGATCTCCATACCAAAGAAAGATAAGGACATCAAGGCCAAGATCAAGTGCAGCGTTGCAGGATGGGGGAAGACACACAACAGCGGTGAAGCAAGTACTAAGCTCATGGAGGTGGACGTCACTATCACTGACAAAAAAGTATGTCAGAAGCAGTGGGGGAAAAATTACTCCACCTCACGTATGGTGTGTGCAGGCGGTCCCGGAGGATTTTGCCAGGGGGATTCTGGAGGACCTCTGGTGTGCGATAACGTCGCAGTCGGTGTCGTTTCATTCAATGAGAAAAACAACTGCGACTCGCCTATACGACCAAACGTCTACACCAAGATTTCCAAATTTCTAAAATGGATAAATGCTACTCTTGACGGTGTGAAGCTGTGGTGGTCGCACCAGAATCTTATCAAGATGAGTGCAGCCTACAGCCTGTTGCTCTCAGTAGCTTTGATGAGCTTGTTATCGACAGGCACATTCGGAGCTGATATCATCAATGGCAAGAAAGCCAAGAAGAACTCCATGCAGTACATGGCATCAGTGCAGATCGAAGGAGAACACATATGTGGAGGTTTCCTGATCCACCCGAGCTACGTGCTCACGGCCGCACACTGCGATCAAAGCGGCAACATGACCGTGATCTTGGGAACCCACAACATCGCTCCAAAAGTAGCCGATCCGAAAAGACatgcagtgcaaaaaaaacataagcacCCATCCTTCAAAAACATCCAATCCGGGAACGACATCATGCTTCTGAAGCTCTCGAAGAAACTGAAAAACGGCAAAGGTGTGAAAACCATAGAAATCCAGAAGAAGGACAAAGGAATTAATCCAAAGACCCAATGCAAGGTCGCAGGATGGGGTAAAACTGGACAGAAAAATATGGTAAACGATCTTCTGGTAACGAACGTGTTGGTTTTCAACTCCACCGTCTGCCGGACAATGTGGaacaaagtgcaaaataaatttCCCATCAATGTCCTGTGCGCTGGGGGTTATAACACCAAAAGTGGTGCTTGCCAGGGGGATTCGGGTGGGCCGCTGGTGTGCAGTGGGAAAGCTGTGGGGATCGTTTCCTTCAACCGGTTAAACAACTGTGACTACCCAGACGTTCCCAACGTTTACACcgacatttataaatacaaaacgtGGATTGAAGAAGTGATAAAAAGAAGCGCCTGACGCTATGCAGCCGAAGTCAGCTGCGCCATTGCATGTGCTAGCTGTCAAAAGTTGTCaataaaagaacaacaaaaactcAA

Function

NR:

description
PREDICTED: granzyme-like protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223903.1 True 1730 mRNA 0.47 10 10413349 10418216

Neighbor

gene id symbol gene type direction distance location
LOC122328194 NA coding upstream 895 10410257 ~ 10412454 (+)
LOC122327820 LOC107675898,LOC107726531 coding upstream 4866 10407145 ~ 10408483 (+)
LOC122327821 LOC107726539,LOC107728585,LOC107675904 coding upstream 11622 10400426 ~ 10401727 (+)
LOC122327181 NA coding upstream 13801 10398269 ~ 10399548 (+)
LOC122328190 LOC107728585,LOC107675904,LOC107726539,LOC107675906,LOC107569043,LOC107728545 coding upstream 20478 10385363 ~ 10392871 (+)
hsd11b1la hsd11b1la,LOC107719662,LOC107586454,LOC107655187,LOC100006793,LOC107675913 coding downstream 4672 10422888 ~ 10426307 (+)
rgmd LOC107726535,LOC107655217,LOC107719593,LOC107596905,LOC107675903 coding downstream 38989 10457205 ~ 10463197 (+)
hmg20b hmg20b,LOC107729671,LOC107586380,LOC107719660,LOC107655186,LOC107675902 coding downstream 298024 10716240 ~ 10720317 (+)
unc13a si:dkey-110c1.7,LOC107729682,LOC107655208,LOC107675908,LOC107719588 coding downstream 302884 10721100 ~ 10759871 (+)
foxq2 foxq2,LOC107729705,LOC107586390,LOC107655205,LOC107596879,LOC107719640,LOC107676973 coding downstream 437599 10855815 ~ 10857119 (+)
G151487 NA non-coding upstream 64463 10347829 ~ 10348886 (+)
G151382 NA non-coding upstream 224177 10188578 ~ 10189172 (+)
G151373 NA non-coding upstream 225766 10185635 ~ 10187583 (+)
G151345 LOC107655225,LOC107554818,LOC107728568,LOC107687715,LOC107599463 non-coding upstream 250903 10151480 ~ 10162446 (+)
LOC122327864 NA non-coding upstream 273195 10137300 ~ 10140154 (+)
G151592 NA non-coding downstream 247840 10666056 ~ 10669212 (+)
LOC122327757 creb3l3a,LOC107729712,LOC107675914,LOC107596868,LOC107655213,LOC107719590,LOC107586456 non-coding downstream 283406 10701622 ~ 10709755 (+)
LOC122328232 NA non-coding downstream 290828 10709044 ~ 10709110 (+)
G151603 NA non-coding downstream 292297 10710513 ~ 10711972 (+)
G151624 mbd3,LOC108427158 non-coding downstream 359511 10777727 ~ 10840314 (+)
gatad2ab gatad2ab,gatad2a,LOC107599456,LOC107728574,LOC107554816 other upstream 419908 9970622 ~ 9993441 (+)
LOC122328159 NA other upstream 449715 9923547 ~ 9963634 (+)
mef2b LOC107687723,LOC107554810,LOC107728551,LOC107719669,LOC107655235,LOC107599488 other upstream 502556 9895441 ~ 9910793 (+)
borcs8 borcs8,LOC107728595,LOC107554813,LOC107599453 other upstream 519842 9888163 ~ 9893507 (+)
G151232 NA other upstream 833198 9577679 ~ 9580151 (+)
G151620 NA other downstream 387836 10806052 ~ 10837365 (+)
onecut3a onecut3,onecut3a,LOC107596910,LOC107676954,LOC107586457,LOC107719659,LOC107655183,LOC105938949 other downstream 456212 10874428 ~ 10892023 (+)
si:dkey-172o19.2 LOC107729689,LOC107676945,LOC107596881,LOC107719578 other downstream 499873 10918089 ~ 10922031 (+)
peak3 LOC107676959,LOC107729697,LOC107593354,LOC107655164,LOC107586433,LOC107719638,LOC107593339 other downstream 516819 10935035 ~ 10994944 (+)
mier2 LOC107729715,LOC107593358,LOC107676949,LOC107699399,LOC107719562,LOC107586401 other downstream 899891 11318107 ~ 11328230 (+)

Expression


Co-expression Network