tmem161a (tmem161a,LOC107728546,LOC107599454,LOC107719614,LOC107554814,LOC107687722)


Basic Information

Item Value
gene id tmem161a
gene name tmem161a,LOC107728546,LOC107599454,LOC107719614,LOC107554814,LOC107687722
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 9913423 ~ 9918916 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223911.1
GAACGCGTCATCAAAATACTCCTTCAGCTGTTCAAACGCTCAAGTGTCACCACGAGAGCTTGCTGCATGGGACGTAAACCCATTCATTAAACTCACCAAACGAAGATGGCTCTAATGGGAGTTCAGTTGGTGGTGAGCTTGCTGGCGGTCAGCATAATGCAAAGAATGGCCCCGCATCTCTCCTTTGCTCGCTGGCTCCTATGTAACGGCAGCCTTTTCAGGTTCAAACATCCGTCTGAAGGCGAGTTGTGCGCCCTTGCGGGGAAACAGATTCCTAAAACCAGCAGGCGAGACAGGAGGCAAAACGGACACGGAGAATCCAAGCCGCTCACGGTCCCGAAAGACATTGATCTTCACCTGGAGAGCGCGCCTGTGAATGTCTTAGACGCTCTTGTTTTGCGGTTCTTTGTTGAGTACCAGTGGCTGATTGATTTTGCCGTCTATGCCACGGGGATCTACCTCTTCACCGAAGGCTACTACAGCGTGGTGGATGCCAGCAAGGAAGTCAACATTGCTTCCATCTGGTGTGTGCTGTCTGTGTTCTTCTGCTTGAGGACGCTGTATCTTCTCACGACCCACTACTTTCGCTCCGAGGAGGGTGGCGAGCGCTCCGTGTGTCTGGCTTTTGGCTTCTTATCTCTTCTCATTGCAATGCTGGTCCTTGTAGTGAGAGAAGACTACCTGGAGTTTGGCCTTGAGCCCGgaTTTACCAGTCTTTTCGACAATTTCGAGGTCTTTGCCAGAAAGCAAGGCTACGAATGGTCCGTTCCCTTCACCAAACTGTCAGTCAAGTTGGGGCTGGCTGTCATTTGTGCCTTCATTGGAGCTCTCCTCGCTTTCCCCGGATTGCGGTTGGCCCAAACCCATCTAGACGCTGTTCAGATGAACACCGATCGTCCAATCATTCAGATCCTTTTGCACATGAGTTTTTTGTCTCCACTGGTTGTTATTGTGATGTGGATTAAACCCATTGCTAGAGACTTCCTAGGCAATGCCCCCATGGGAAAGACCTCTGTTACCTTACTTTCTAGTTCTGCCTTTAACTCGGTGCGTCTTTGGACGATCGTGGTGCTGTGTGTTTTGCGGCTGCTGCTCACCCGCTATCACCTGCAGGCCTATCTCAATCTGGCACAGAAGTGGGTGGAGCAAATGAAGAAAGAGGCGGGGCGTATCGCTGCCATTGACATCCAGAGGAAGGTGACAAGAGTTTTCTGCTACTTGACTGTGGTCACCCTTCAGTACCTTATACCCATTCTGCTTGTGCTTTTCTCGACTTTGGCACTCAAATCTTTAGGTGACTTTTCATGGGGCCTTGGAGCGGAGCCTCCGAGTGTGACCCCTGCTCCTGTGCTTCCCACCGCCCCTCCACCCGTCCCCAGACCGGAAGACGACGAGGATGTAGAAGACATGGAGGAGGACATCCAGGCCACCGTAGCCCACGTGACGGAGCTGTTCATTGCCTTACGCGGGCTCCTCACGCCCATCTTCTTCCGGGGGATCTTGGCCTTCCTCACGTGGTGGGTCGCTGCCTGTCAGCTCGTCAGCAGCCTCTTCGGGATCTACTTCCACCAGTATCTGATGCACAACTAAAAAAAAGGGCCCTGAAGTGAAGCTCTTCGTGCTGAATCCAGCTCTTCAACATCAACACGAACAGTCACGCAAACACTTCTGATGCGCCAACCGGAAGAAGGCTGGCTCCTCGGAAACAAACGCTCACCTAAACCCGTTGTATTGTTTGGACATTTCTGTTGGGTGCGTTCAAAGCGAAGATGCTAGTTAACCGTATGCATAAGATCACCGAGATAACatcgttttttttaacttaagaAGTTTTCGGTTCCCCGTTGTGGTGATCGTTTCGTTGAAATGCAATCGTAAGGGCCTGATAACTCAGGGATGCGGTCCGAAATGGTGTTTCTTCCACCAGCACAATATCATGAAGCGTTTCATGGACTCGGTCGTTCCAAAATgaaatttgtatttcattttgtacTGTTGCCTTGgatgaattttttaaaagaatgtaatggtgtattttaaatgctgtgttTGCTATATGGCTGATGTGTCCTAATCGTTTTGCTCACATGTCTCATGAATGATcgtatgatttttattattatttttttttgcctgcttTTGAACTGCTGTCTTCAGTCATAGGATCAGAGGAAGTGATCAGGGATATCATTTAAGCTGGTGGGCTTAGGCCGAGCTCGTAATTtaacactgatttatttattaactttctaACGTCAACCGACCTACGTTTGATTCGAAACAATAaactgatcatttaaaaaata

Function

symbol description
tmem161a Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in adaxial cell; myotome; polster; and somite. Orthologous to human TMEM161A (transmembrane protein 161A).

NR:

description
PREDICTED: transmembrane protein 161A

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223911.1 True 2306 mRNA 0.49 12 9913423 9918916

Neighbor

gene id symbol gene type direction distance location
tmem221 NA coding downstream 18456 9890550 ~ 9894967 (-)
rfxank rfxank,LOC107687741,LOC107554808,LOC107728547,LOC107719616,LOC107599486 coding downstream 25564 9886173 ~ 9887859 (-)
LOC122328188 ncan,ncanb,LOC107728538,LOC107687726,LOC107554802,LOC107719650,LOC107599474,LOC107097932 coding downstream 125048 9730641 ~ 9788375 (-)
LOC122328187 ncan,ncanb,LOC107728538,LOC107554802,LOC107687726,LOC107599474,LOC107719650 coding downstream 224283 9686468 ~ 9689140 (-)
LOC122328186 ncan,LOC107687726,LOC107719650,LOC107599474,LOC107728538 coding downstream 230832 9625685 ~ 9682591 (-)
tssk6 tssk6,LOC107687737,LOC107728539,LOC107554804,LOC107599475,LOC107719648 coding upstream 75276 9994192 ~ 9995007 (-)
si:ch211-212d10.2 si:ch211-212d10.2,LOC107728577,LOC107687719,LOC106613739,LOC101487565 coding upstream 125306 10044222 ~ 10047874 (-)
cirbpb LOC107599461,LOC107655227,LOC107719610 coding upstream 156116 10075032 ~ 10080097 (-)
midn LOC107554818,LOC107728568,LOC107687715,LOC107655225,LOC107719606 coding upstream 232546 10151462 ~ 10173317 (-)
atp5f1d atp5d,LOC107728581,LOC107719603,LOC107554819,LOC107569937 coding upstream 264122 10183038 ~ 10187587 (-)
LOC122327858 NA non-coding downstream 47535 9819693 ~ 9865888 (-)
G151319 hapln4,LOC107554801,LOC107728536,LOC107719665,LOC107599484 non-coding downstream 292258 9616790 ~ 9621165 (-)
G151289 NA non-coding downstream 448910 9426153 ~ 9464513 (-)
G151266 NA non-coding downstream 459076 9360531 ~ 9454347 (-)
G151444 NA non-coding upstream 104302 10023218 ~ 10028439 (-)
G151439 NA non-coding upstream 135002 10053918 ~ 10072892 (-)
G151468 LOC107687734,LOC107728578,LOC107719602,LOC107655224,LOC107569929 non-coding upstream 270914 10189830 ~ 10194857 (-)
G151457 NA non-coding upstream 326002 10244918 ~ 10249842 (-)
G151507 NA non-coding upstream 456257 10375173 ~ 10375615 (-)
gpx4a gpx4a,LOC108429535 other downstream 410417 9498669 ~ 9503006 (-)
nfia nfia,LOC107592693,LOC107599440,LOC107653654 other downstream 741492 9013548 ~ 9171931 (-)
G151107 tal1,LOC107669848 other downstream 1026482 8884121 ~ 8886941 (-)
zbtb37 zbtb37,LOC107588063,LOC107757486,LOC107653628,LOC107669814,LOC107715095,LOC107592718,LOC107592717,LOC107669813,LOC107715094,LOC107757485,LOC107588062,LOC107653629 other downstream 1300679 8600350 ~ 8612744 (-)
tmem264 tmem264,LOC107715063,LOC107757465,LOC107665501,LOC107653574,LOC107588123,LOC107561895 other downstream 1620215 8286372 ~ 8293208 (-)
G151425 NA other upstream 38895 9957811 ~ 9983147 (-)
polrmt LOC107687709,LOC107728563,LOC107569934,LOC107655172,LOC107719647,LOC107569035,LOC101483880 other upstream 363106 10282022 ~ 10321663 (-)
micos13 si:dkey-78l4.14,LOC107596903,LOC107719663,LOC107586453,LOC107675912,LOC107655188 other upstream 500211 10419127 ~ 10422354 (-)
oaz1a oaz1a,oaz1s,oaz1,LOC107719576,LOC107655198,LOC107586434 other upstream 1016136 10935052 ~ 10994952 (-)
rex1bd si:ch211-87h14.3,clg08h19orf60,cssa23h19orf60,LOC107676986,LOC107729673,LOC107593355,LOC107719569,LOC108439285,LOC103025814 other upstream 1255227 11174143 ~ 11188692 (-)

Expression


Co-expression Network