LOC122328209 (si:ch211-197g15.8,si:ch211-197g15.7,LOC107599470)


Basic Information

Item Value
gene id LOC122328209
gene name si:ch211-197g15.8,si:ch211-197g15.7,LOC107599470
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 9444075 ~ 9446244 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223917.1
CAGCAtatgttttacaataatatcTGCTCAAACCTTTACAGTCCTTCAGGTTAGTGTGAAAGAGAAGCCATGGAGAACTATTCTTTGGACAGAAAAGTATATTTTCACTTTGTTGTGTTCAAGTTGTGTTCTGTTTTGTAGACAAAAAGATGACCTCATGGAGATGATTAGGAAATTTAAACCCCTGATGAAGTCTGTGAGTAAGGTTCGAATCCTAATGATCGGTCCTGTAGGAGCTGGAAAATCCAGTTTCTTCAACTCCATCAACTCCATCTTCATGGGCCGCATGACCAGCAAAGCCATGTCAGGATCTGCAGGAACTAGTGTCACCACGCAGTATCGCACATATCAAGGGAAAGATGGTCCTGAAAGAAAGCCGTTGCCGTTTGTGTTGTGTGACACCATGGGAGTCGAGGAGCAATCAGGTGCAGGACTGAATATTGAGGACATCAACAGCATTCTTCAAGGTCAAGTACCAGACCGCTATAAATTCAACCCTACAGCACCATTTAAACCTGATGATCAAAAAGCCTCCAGACCTGCATCTCTGCAGGAGAAGATCCACTGTGTGGTCTACGTGATCGACGCCACCAAAATCTCCCTCATGTCTGATAAACTCGAGGAGAAACTTGCTTCTATACGTAGTCAGATAAACTCACTGGCCATTCCCCAGATCGCCTTGATGACCAAAGTAGATGAAACATGTCCTCACGTGCAGAAAGACCTTCAAAGCCTCTACGCAAGCTCCTACATCAAGTCAAAGGTTCAGGAGGTGAGCTCTCGGTTGGGTGTGCCGGTGTCTTGTGTGTTACCGGTGAAGAACTACAGTCAGGAGCTGGAGCTCAACTGTGACGTCCTGCTGCTCTCCGCTCTACAGCAGATGCTTCGCTTCGCAGACGACTATCTAGATGATGATCCCATGTAGGCCATATAATGTGCTGCATAGACATGGGTTTACACTGATCAGCCGTAATAATAAAACTACTGAAATTA

Function

NR:

description
PREDICTED: interferon-induced protein 44-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223917.1 True 993 mRNA 0.45 6 9444075 9446244

Neighbor

gene id symbol gene type direction distance location
LOC122328207 NA coding downstream 1705 9439906 ~ 9442370 (-)
LOC122327621 si:ch211-197g15.7,LOC107669809,LOC107728557,LOC107592684,LOC107655250,LOC107592683,LOC107669808 coding downstream 69850 9370790 ~ 9374225 (-)
LOC122327619 LOC107728561,LOC107592686,LOC107599470 coding downstream 74939 9366331 ~ 9369136 (-)
LOC122327620 si:ch211-197g15.9,LOC107655250,LOC107728562,LOC107669808,LOC107728557,LOC107592685,LOC107669809 coding downstream 78789 9361273 ~ 9365286 (-)
nphs2 nphs2,LOC107728590,LOC107669835,LOC107653553,LOC107592691,LOC107715061 coding downstream 184097 9257131 ~ 9259978 (-)
pip5k1ca pip5k1ca,LOC107592679,LOC107719627,LOC107599447,LOC107655246 coding upstream 26769 9473013 ~ 9497463 (-)
arhgap45b hmha1b,LOC107669820,LOC107655244,LOC107592722 coding upstream 60344 9506588 ~ 9532132 (-)
tjp3 tjp3,LOC107669831,LOC107719622,LOC107592677,LOC107655241,LOC107728571,LOC107599473 coding upstream 87138 9533382 ~ 9549007 (-)
si:ch73-63e15.2 si:ch73-63e15.2,LOC107669818,LOC107592676,LOC107599449,LOC107655177 coding upstream 108927 9555171 ~ 9597506 (-)
LOC122328186 ncan,LOC107687726,LOC107719650,LOC107599474,LOC107728538 coding upstream 179441 9625685 ~ 9682591 (-)
G151280 NA non-coding downstream 45979 9387145 ~ 9398096 (-)
G151122 NA non-coding downstream 296774 9145305 ~ 9147301 (-)
G151112 NA non-coding downstream 494016 8949616 ~ 8950059 (-)
G151111 NA non-coding downstream 495048 8948788 ~ 8949027 (-)
G151110 NA non-coding downstream 526932 8915901 ~ 8917143 (-)
G151319 hapln4,LOC107554801,LOC107728536,LOC107719665,LOC107599484 non-coding upstream 170546 9616790 ~ 9621165 (-)
LOC122327858 NA non-coding upstream 373449 9819693 ~ 9865888 (-)
G151444 NA non-coding upstream 576974 10023218 ~ 10028439 (-)
G151439 NA non-coding upstream 607674 10053918 ~ 10072892 (-)
G151468 LOC107687734,LOC107728578,LOC107719602,LOC107655224,LOC107569929 non-coding upstream 743586 10189830 ~ 10194857 (-)
nfia nfia,LOC107592693,LOC107599440,LOC107653654 other downstream 272144 9013548 ~ 9171931 (-)
G151107 tal1,LOC107669848 other downstream 557134 8884121 ~ 8886941 (-)
zbtb37 zbtb37,LOC107588063,LOC107757486,LOC107653628,LOC107669814,LOC107715095,LOC107592718,LOC107592717,LOC107669813,LOC107715094,LOC107757485,LOC107588062,LOC107653629 other downstream 831331 8600350 ~ 8612744 (-)
tmem264 tmem264,LOC107715063,LOC107757465,LOC107665501,LOC107653574,LOC107588123,LOC107561895 other downstream 1150867 8286372 ~ 8293208 (-)
LOC122327776 LOC107751486,LOC107656680,LOC107565498,LOC107653539,LOC107715642,LOC107600957,LOC107751482 other downstream 1825677 7609856 ~ 7618398 (-)
gpx4a gpx4a,LOC108429535 other upstream 52425 9498669 ~ 9503006 (-)
G151425 NA other upstream 511567 9957811 ~ 9983147 (-)
polrmt LOC107687709,LOC107728563,LOC107569934,LOC107655172,LOC107719647,LOC107569035,LOC101483880 other upstream 835778 10282022 ~ 10321663 (-)
micos13 si:dkey-78l4.14,LOC107596903,LOC107719663,LOC107586453,LOC107675912,LOC107655188 other upstream 972883 10419127 ~ 10422354 (-)
oaz1a oaz1a,oaz1s,oaz1,LOC107719576,LOC107655198,LOC107586434 other upstream 1488808 10935052 ~ 10994952 (-)

Expression


Co-expression Network