LOC122328212 (LOC107728582,LOC107687738)


Basic Information

Item Value
gene id LOC122328212
gene name LOC107728582,LOC107687738
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 10353846 ~ 10355418 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223922.1
AGTAAAGTGTAAACAGCCTCAGCTATTTCAAGAAAGACCGACATCTACCTCCTCAAGCCTACTATCTACCAATTATCATACTGAGTTATTTTCATACCACAAACTGAAAGTAACAGATTACGCGAAGCTCAGTTTCTTCACCCATACAGCTAGCGAGAACTCAATGATTTACTGACTGTCTTCATGATGGCCATCATCTCTCTGCTCCTGCTGGCCTCTCTGCTGCCACACCTGACCTACAACGctcGTGTGAATGTGGGTATAGTGAACGGCAAAGAAGCGAAACCCCACTCCAGACCTTACATGGTTTCTGTCCAAGAAAAGGAGCAGCATATCTGCGGTGGATTCCTCATCTCTGATAGATTTGTCATGACTGCTGCGCACTGCCGAAACAACGCTCAAGTTCTGACGGTCTTGTTAGGCGCACATGACCTAGGAAAAAAGAATGAGAATTCAATACGATTCAGAGTGGATTCGTACCATCAGCATCCAAAATACACCACAGAAACCTATCACAATGACATCTTGCTTTTGAAGttagaaaaaaatgtacaactGAACAACAACATCAAGTGGATACCTATACCACAGAAAGAAGGGGATATCGAAGCTGGTTCTGTTTGCAGTGTCGCTGGCTGGGGATATTTAGTAACTAACAAGACAAGCGATCTCCTCATGGAGATAAACGTGAAGGTCTTGAATAATGTGGAATGTGAAAGTAAATGGGGGAAGAAACAGTTTTCAGCTTCGCAGATGATGTGTGTTCATGGAGATGGAGGAAGCTGTGacGGGGATTCAGGAGGTCCGTTGGTTTGTGGAGACACTGCGGTTGGCATCACTTCCTTTGGTGACCCTGATCAATGCAATTCACAAAAGCTACCTgaagtttatattaatatttccgCTTATCTTCCATGGATAAAGAACATAATTGGAAACGTAAACTGAATCTTGCAGATAACATAGGGTGATTGTTTTGGGACACATGTTAATTTTCCTCTAAATctgcttttaataaacacagtatacattta

Function

NR:

description
PREDICTED: granzyme B(G,H)-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223922.1 True 1034 mRNA 0.42 5 10353846 10355418

Neighbor

gene id symbol gene type direction distance location
fgf22 fgf22,LOC107687712,LOC107569930,LOC107719646,LOC107655219,LOC107728567,LOC107569044 coding upstream 6180 10325575 ~ 10347666 (+)
hcn2b hcn2b,LOC107569045,LOC107569931,LOC107719599,LOC107655221,LOC108429559 coding upstream 74393 10250867 ~ 10279453 (+)
bsg bsg,LOC107728565,LOC107719600,LOC107569932 coding upstream 103985 10239077 ~ 10249861 (+)
fstl3 fstl3,LOC107687713,LOC107728592,LOC107569933,LOC107655223,LOC107554822,LOC107719601 coding upstream 122537 10223590 ~ 10231309 (+)
cbarpb LOC107655224,LOC107554820,LOC107719602,LOC107728578,LOC107687734 coding upstream 145061 10189214 ~ 10208785 (+)
LOC122328211 NA coding downstream 4708 10360126 ~ 10362209 (+)
LOC122328214 NA coding downstream 13677 10369095 ~ 10370513 (+)
LOC122328213 NA coding downstream 16786 10372204 ~ 10374126 (+)
LOC122328210 LOC107728584 coding downstream 21290 10376708 ~ 10378690 (+)
LOC122327872 LOC107728585,LOC107675904,LOC107726539,LOC107675906,LOC107569043 coding downstream 26089 10381507 ~ 10382779 (+)
G151487 NA non-coding upstream 4960 10347829 ~ 10348886 (+)
G151382 NA non-coding upstream 164674 10188578 ~ 10189172 (+)
G151373 NA non-coding upstream 166263 10185635 ~ 10187583 (+)
G151345 LOC107655225,LOC107554818,LOC107728568,LOC107687715,LOC107599463 non-coding upstream 191400 10151480 ~ 10162446 (+)
LOC122327864 NA non-coding upstream 213692 10137300 ~ 10140154 (+)
G151516 NA non-coding downstream 33132 10388550 ~ 10421036 (+)
G151592 NA non-coding downstream 310638 10666056 ~ 10669212 (+)
LOC122327757 creb3l3a,LOC107729712,LOC107675914,LOC107596868,LOC107655213,LOC107719590,LOC107586456 non-coding downstream 346204 10701622 ~ 10709755 (+)
LOC122328232 NA non-coding downstream 353626 10709044 ~ 10709110 (+)
G151603 NA non-coding downstream 355095 10710513 ~ 10711972 (+)
gatad2ab gatad2ab,gatad2a,LOC107599456,LOC107728574,LOC107554816 other upstream 360405 9970622 ~ 9993441 (+)
LOC122328159 NA other upstream 390212 9923547 ~ 9963634 (+)
mef2b LOC107687723,LOC107554810,LOC107728551,LOC107719669,LOC107655235,LOC107599488 other upstream 443053 9895441 ~ 9910793 (+)
borcs8 borcs8,LOC107728595,LOC107554813,LOC107599453 other upstream 460339 9888163 ~ 9893507 (+)
G151232 NA other upstream 773695 9577679 ~ 9580151 (+)
G151620 NA other downstream 450634 10806052 ~ 10837365 (+)
onecut3a onecut3,onecut3a,LOC107596910,LOC107676954,LOC107586457,LOC107719659,LOC107655183,LOC105938949 other downstream 519010 10874428 ~ 10892023 (+)
si:dkey-172o19.2 LOC107729689,LOC107676945,LOC107596881,LOC107719578 other downstream 562671 10918089 ~ 10922031 (+)
peak3 LOC107676959,LOC107729697,LOC107593354,LOC107655164,LOC107586433,LOC107719638,LOC107593339 other downstream 579617 10935035 ~ 10994944 (+)
mier2 LOC107729715,LOC107593358,LOC107676949,LOC107699399,LOC107719562,LOC107586401 other downstream 962689 11318107 ~ 11328230 (+)

Expression


Co-expression Network