LOC122328213


Basic Information

Item Value
gene id LOC122328213
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 10372204 ~ 10374126 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223923.1
CCACAAACTGAAGACAACAATTTAGGCAGCTCGTTGTCTCAACCCATCCTTATAAGTATACAGTGTTTGTCAGCGAGAGATCATTGTCTTCAAGATGACCATCATCTCTCTGCTCCTGCTGATCTCTCTGCTTCCACACCTGACCTTCACCGATCGTGGGAATGTGGTTATAGTGAACGGCAAAGAAGCAAAACCACACTCCAGACCGTACATGGTTTCTCTTCAGAAGGACAAGACGCATATCTGTGGTGGCTTTCTCATCTCTGATGAGTTCGTGATGACTGCTGCACACTGCCGGAAAAGAAGTGAAAAACTGACAGTCGTTGTTGGTGCACATGACGTAAAAAATAAGAATGAGGGGTCTGTCAGCATCAGAGTGAAGTCCTACCACAAGCATCCAGGCTATTGCAGTAATTCAGGCTTTAATGACATCATGCTTTTGAGGCTAAAGAAAACGGTTCAAGGAATGAATAATGTCAAGACAATTTCCATACCAACACAAGATGGAGACATTGAAGCTGATGCTGTCTGCAGTGTGGCCGGCTGGGGCAGACTACAGGCTAAAGGCAAAGGGAGTGATTATCTAATGGAggcaaatgtgtatataatggATAACACAGAATGTGAAACAAGGTGGGAAGAGTGGTACTCCGTCTCACAGATGACGTGCGCACATGGCCACGGCGGATCCTGCAAAGGCGATTCTGGGGGTCCTTTGGTTTGTGGAGACACTGCAGTTGGGGTTACATCTTTTGGATCTGAGGTTCTCTGCAATTCACCTGAAAAGCCTAATGTCTATACTAAGATTTCAGCTTATCTGCGGTGGATcagaaaaacaatcaaaaatgttaagtaaattcatgtatttatttcagtaaacatATCACATGATGCGTCAATCGTTTGAAGCGTTATCGCTGTCACAaccaaatataattacaattttatatgaTGGAAATGGGTTATATCTTGTCTACTTGATTTTGGAGTCATGTCGAAAAATCATATTGTCTCACTTTTTATATTACctaaactttaataaaacatat

Function

GO: NA

KEGG:

id description
K01353 GZMB; granzyme B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223923.1 True 1049 mRNA 0.42 5 10372204 10374126

Neighbor

gene id symbol gene type direction distance location
LOC122328214 NA coding upstream 1691 10369095 ~ 10370513 (+)
LOC122328211 NA coding upstream 9995 10360126 ~ 10362209 (+)
LOC122328212 LOC107728582,LOC107687738 coding upstream 16786 10353846 ~ 10355418 (+)
fgf22 fgf22,LOC107687712,LOC107569930,LOC107719646,LOC107655219,LOC107728567,LOC107569044 coding upstream 24538 10325575 ~ 10347666 (+)
hcn2b hcn2b,LOC107569045,LOC107569931,LOC107719599,LOC107655221,LOC108429559 coding upstream 92751 10250867 ~ 10279453 (+)
LOC122328210 LOC107728584 coding downstream 2582 10376708 ~ 10378690 (+)
LOC122327872 LOC107728585,LOC107675904,LOC107726539,LOC107675906,LOC107569043 coding downstream 7381 10381507 ~ 10382779 (+)
LOC122328190 LOC107728585,LOC107675904,LOC107726539,LOC107675906,LOC107569043,LOC107728545 coding downstream 11237 10385363 ~ 10392871 (+)
LOC122327181 NA coding downstream 24143 10398269 ~ 10399548 (+)
LOC122327821 LOC107726539,LOC107728585,LOC107675904 coding downstream 26300 10400426 ~ 10401727 (+)
G151487 NA non-coding upstream 23318 10347829 ~ 10348886 (+)
G151382 NA non-coding upstream 183032 10188578 ~ 10189172 (+)
G151373 NA non-coding upstream 184621 10185635 ~ 10187583 (+)
G151345 LOC107655225,LOC107554818,LOC107728568,LOC107687715,LOC107599463 non-coding upstream 209758 10151480 ~ 10162446 (+)
LOC122327864 NA non-coding upstream 232050 10137300 ~ 10140154 (+)
G151516 NA non-coding downstream 14424 10388550 ~ 10421036 (+)
G151592 NA non-coding downstream 291930 10666056 ~ 10669212 (+)
LOC122327757 creb3l3a,LOC107729712,LOC107675914,LOC107596868,LOC107655213,LOC107719590,LOC107586456 non-coding downstream 327496 10701622 ~ 10709755 (+)
LOC122328232 NA non-coding downstream 334918 10709044 ~ 10709110 (+)
G151603 NA non-coding downstream 336387 10710513 ~ 10711972 (+)
gatad2ab gatad2ab,gatad2a,LOC107599456,LOC107728574,LOC107554816 other upstream 378763 9970622 ~ 9993441 (+)
LOC122328159 NA other upstream 408570 9923547 ~ 9963634 (+)
mef2b LOC107687723,LOC107554810,LOC107728551,LOC107719669,LOC107655235,LOC107599488 other upstream 461411 9895441 ~ 9910793 (+)
borcs8 borcs8,LOC107728595,LOC107554813,LOC107599453 other upstream 478697 9888163 ~ 9893507 (+)
G151232 NA other upstream 792053 9577679 ~ 9580151 (+)
G151620 NA other downstream 431926 10806052 ~ 10837365 (+)
onecut3a onecut3,onecut3a,LOC107596910,LOC107676954,LOC107586457,LOC107719659,LOC107655183,LOC105938949 other downstream 500302 10874428 ~ 10892023 (+)
si:dkey-172o19.2 LOC107729689,LOC107676945,LOC107596881,LOC107719578 other downstream 543963 10918089 ~ 10922031 (+)
peak3 LOC107676959,LOC107729697,LOC107593354,LOC107655164,LOC107586433,LOC107719638,LOC107593339 other downstream 560909 10935035 ~ 10994944 (+)
mier2 LOC107729715,LOC107593358,LOC107676949,LOC107699399,LOC107719562,LOC107586401 other downstream 943981 11318107 ~ 11328230 (+)

Expression


Co-expression Network