LOC122328214


Basic Information

Item Value
gene id LOC122328214
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 10369095 ~ 10370513 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223924.1
TGTCAGTGAGAGCTCACTGATTGTCTTCATCATGACCATTATCTCTCTGCTTCTGCTGGCCTCTCTGCTGCCAAACCTAACCTTCACTGCTCGTGTGGGGATAGTGAACGGCACAGAAGCAAAACCCCACTCCAGACCTTACATGGTTTCTATTCAGGTTTTTGGGGAACACGACTGTGGTGGCTTCCTCATCTCTGATGAGTTTGTCCTGACTGCTGCACATTGCTGGGAGAGATCTCAGGTTCTGACGGTTGTGGTTGGTGCTCATGACTTGAGGAAAAGTAAGAACCGCGTCGGAGTGAAGAACTACATCCCACATCCAGACTACAGAAGAAGTCCTATTCGGAATGACATCATGCTTTTGAGGCTAAAGAAGAAgatcaaactaaacaaatatgtaaaatggATATCATTACCAAAGGATGGAGAAGAGGTTAATGTAGATACTCTCTGTAGTGTTGCTGGTTGGGGAAGACTTTGGACTGATGGACCAATGAGCAGTCGTTTAATGGAGGCCAACGTGCACATAATGAATAACAGTGAATGTTACAAGAGGTGGGGAGAGATTTACTACTCTGTTTCACAGATGATGTGTACACAAAGCTATGGTGGATTCTGCAATGGAGATTCCGGGGGTCCGTTGGTTTGCGGAGACGCTGCAGTTGGTGTCGTATCATTTCGTTACATTCATCTCTGTAATTCACCCGCGTATCCTAATGTGTACACTAAGATTTCATCTTATCTTCCATGGATCCAGCAAATCATTAGAAATGTTAAGTGactacatgaaaaataaaacaaggaagaaatgctttttattgAATTCTTCCATAAGGCTTCTTTCAATAAAAGTATCACATGGAAAGCA

Function

GO:

id name namespace
GO:0006950 response to stress biological_process

KEGG:

id description
ko03060 Protein export
ko03070 Bacterial secretion system
ko02024 Quorum sensing

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223924.1 True 868 mRNA 0.43 5 10369095 10370513

Neighbor

gene id symbol gene type direction distance location
LOC122328211 NA coding upstream 6886 10360126 ~ 10362209 (+)
LOC122328212 LOC107728582,LOC107687738 coding upstream 13677 10353846 ~ 10355418 (+)
fgf22 fgf22,LOC107687712,LOC107569930,LOC107719646,LOC107655219,LOC107728567,LOC107569044 coding upstream 21429 10325575 ~ 10347666 (+)
hcn2b hcn2b,LOC107569045,LOC107569931,LOC107719599,LOC107655221,LOC108429559 coding upstream 89642 10250867 ~ 10279453 (+)
bsg bsg,LOC107728565,LOC107719600,LOC107569932 coding upstream 119234 10239077 ~ 10249861 (+)
LOC122328213 NA coding downstream 1691 10372204 ~ 10374126 (+)
LOC122328210 LOC107728584 coding downstream 6195 10376708 ~ 10378690 (+)
LOC122327872 LOC107728585,LOC107675904,LOC107726539,LOC107675906,LOC107569043 coding downstream 10994 10381507 ~ 10382779 (+)
LOC122328190 LOC107728585,LOC107675904,LOC107726539,LOC107675906,LOC107569043,LOC107728545 coding downstream 14850 10385363 ~ 10392871 (+)
LOC122327181 NA coding downstream 27756 10398269 ~ 10399548 (+)
G151487 NA non-coding upstream 20209 10347829 ~ 10348886 (+)
G151382 NA non-coding upstream 179923 10188578 ~ 10189172 (+)
G151373 NA non-coding upstream 181512 10185635 ~ 10187583 (+)
G151345 LOC107655225,LOC107554818,LOC107728568,LOC107687715,LOC107599463 non-coding upstream 206649 10151480 ~ 10162446 (+)
LOC122327864 NA non-coding upstream 228941 10137300 ~ 10140154 (+)
G151516 NA non-coding downstream 18037 10388550 ~ 10421036 (+)
G151592 NA non-coding downstream 295543 10666056 ~ 10669212 (+)
LOC122327757 creb3l3a,LOC107729712,LOC107675914,LOC107596868,LOC107655213,LOC107719590,LOC107586456 non-coding downstream 331109 10701622 ~ 10709755 (+)
LOC122328232 NA non-coding downstream 338531 10709044 ~ 10709110 (+)
G151603 NA non-coding downstream 340000 10710513 ~ 10711972 (+)
gatad2ab gatad2ab,gatad2a,LOC107599456,LOC107728574,LOC107554816 other upstream 375654 9970622 ~ 9993441 (+)
LOC122328159 NA other upstream 405461 9923547 ~ 9963634 (+)
mef2b LOC107687723,LOC107554810,LOC107728551,LOC107719669,LOC107655235,LOC107599488 other upstream 458302 9895441 ~ 9910793 (+)
borcs8 borcs8,LOC107728595,LOC107554813,LOC107599453 other upstream 475588 9888163 ~ 9893507 (+)
G151232 NA other upstream 788944 9577679 ~ 9580151 (+)
G151620 NA other downstream 435539 10806052 ~ 10837365 (+)
onecut3a onecut3,onecut3a,LOC107596910,LOC107676954,LOC107586457,LOC107719659,LOC107655183,LOC105938949 other downstream 503915 10874428 ~ 10892023 (+)
si:dkey-172o19.2 LOC107729689,LOC107676945,LOC107596881,LOC107719578 other downstream 547576 10918089 ~ 10922031 (+)
peak3 LOC107676959,LOC107729697,LOC107593354,LOC107655164,LOC107586433,LOC107719638,LOC107593339 other downstream 564522 10935035 ~ 10994944 (+)
mier2 LOC107729715,LOC107593358,LOC107676949,LOC107699399,LOC107719562,LOC107586401 other downstream 947594 11318107 ~ 11328230 (+)

Expression


Co-expression Network