pigx


Basic Information

Item Value
gene id pigx
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 2143038 ~ 2146500 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223937.1
CGCCGCCCTCTGCCGGAGCGCCGTCCCCTGACCCGGAAGTGAAACGGACCGGCCATGGTTAGGGTTTGTTTGCTAGCGGCTGCTCTGTGTTTGGTCCGCCGCGGGGTTTCTCAAGAAGCAGACTGTTTCCCGCCGGACTGGCTGAAGTCGGTGTCCCTGTCGGTGAAGATTTCCAAAGCAGGATTTCACAGAGATGTTGAGTACAGCGTCCGGTGGAGCAGCGCAGGCCGTGATGTCCGGGCCGTCCTCGTCCAGAAGCTGCCCAGCGGGGTTTACATGGACGAGTACGAGCTGGAGGCCCTGAGACGCTCCTCGGGGCCGGAGGTTCTCCTGGACGCCAGGCCCGACCTGGAGGCTCCCGAGTACCTGTCCCCCGGCTTCACGGCGCTGGTGTTCCTCTCGGGGCCGCGGCGGGTCGAGGTTCCCGTCCACGGGCGATACCAGCGGCCCTCGGGCTCCGGCGGACGGGTGACGGTGGAGCTGGAGCGTCCTCGGCTGCTGCTGAGATCAGATCAGTgCCGGACGCTGAGCGCTGAGGCGCGTCTCCTCGAGGTCCGAGCTCCCTGCACCGCTTTCAAACACCAGCACCTGCTCCTGGACCGAGGTCCTGCTCCCAGAGggtaATGCTGGTGTGAGTCTGGAGATCCCGGTTGGTGATTCGACGATgatcatctgtgtgtgtgtcgttaCTGTACTGACTGCTGTACTGAGCTGTGTTTACCTGCTCACACACATCTGGAAACACGTTAgagtctgacacacacacacacacacacacacacacacacacacacactcctgtgaTAGAGCTGGTGTTTCAGAGTATCATGTTCTAGTGGTTTATTACTGTGATTG
>XM_043223938.1
GTTCTCGTCGCGCGCGACGCTCCTCGCCGCCCTCTGCCGGAGCGCCGTCCCCTGACCCGGAAGTGAAACGGACCGGCCATGGTTAGGGTTTGTTTGCTAGCGGCTGCTCTGTGTTTGGTCCGCCGCGGGGTTTCTCAAGAAGACTGTTTCCCGCCGGACTGGCTGAAGTCGGTGTCCCTGTCGGTGAAGATTTCCAAAGCAGGATTTCACAGAGATGTTGAGTACAGCGTCCGGTGGAGCAGCGCAGGCCGTGATGTCCGGGCCGTCCTCGTCCAGAAGCTGCCCAGCGGGGTTTACATGGACGAGTACGAGCTGGAGGCCCTGAGACGCTCCTCGGGGCCGGAGGTTCTCCTGGACGCCAGGCCCGACCTGGAGGCTCCCGAGTACCTGTCCCCCGGCTTCACGGCGCTGGTGTTCCTCTCGGGGCCGCGGCGGGTCGAGGTTCCCGTCCACGGGCGATACCAGCGGCCCTCGGGCTCCGGCGGACGGGTGACGGTGGAGCTGGAGCGTCCTCGGCTGCTGCTGAGATCAGATCAGTgCCGGACGCTGAGCGCTGAGGCGCGTCTCCTCGAGGTCCGAGCTCCCTGCACCGCTTTCAAACACCAGCACCTGCTCCTGGACCGAGGTCCTGCTCCCAGAGggtaATGCTGGTGTGAGTCTGGAGATCCCGGTTGGTGATTCGACGATgatcatctgtgtgtgtgtcgttaCTGTACTGACTGCTGTACTGAGCTGTGTTTACCTGCTCACACACATCTGGAAACACGTTAgagtctgacacacacacacacacacacacacacacacacacacacactcctgtgaTAGAGCTGGTGTTTCAGAGTATCATGTTCTAGTGGTTTATTACTGTGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K07541 PIGX; GPI mannosyltransferase 1 subunit X

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223937.1 False 855 mRNA 0.61 6 2143038 2146476
XM_043223938.1 True 873 mRNA 0.61 6 2143041 2146500

Neighbor

gene id symbol gene type direction distance location
pak2b pak2b,pak2,LOC107741800,LOC107678112,LOC107679089 coding downstream 675 2132741 ~ 2142363 (-)
aqp12 NA coding downstream 14073 2124590 ~ 2128965 (-)
trnai-aau_113 NA coding downstream 15103 2127862 ~ 2127935 (-)
LOC122327992 NA coding downstream 19069 2120589 ~ 2123969 (-)
LOC122328100 NA coding downstream 28795 2112781 ~ 2114243 (-)
ing5a ing5,ing5a,LOC107574595,LOC107678097,LOC107548837,LOC107679074,LOC108424972 coding upstream 2178 2148678 ~ 2155381 (-)
lmnb2 lmnb2,LOC107679080,LOC107678108,LOC107744643,LOC107741802 coding upstream 59983 2206483 ~ 2217633 (-)
lonp1 lonp1,LOC107744642,LOC107679084,LOC107548847,LOC107678106 coding upstream 75339 2221839 ~ 2231871 (-)
gpr35.1 LOC107717171,LOC107678099,LOC107580869,LOC107678091 coding upstream 104711 2251211 ~ 2255460 (-)
si:zfos-943e10.1 LOC107678111,LOC107717170,LOC107559831,LOC107562095,LOC107679086 coding upstream 109636 2256136 ~ 2269855 (-)
LOC122327838 NA non-coding downstream 10355 2129531 ~ 2132683 (-)
G148679 NA non-coding downstream 10858 2129842 ~ 2132180 (-)
trnag-gcc_103 NA non-coding downstream 11755 2131213 ~ 2131283 (-)
trnad-guc_17 NA non-coding downstream 12080 2130887 ~ 2130958 (-)
trnai-aau_114 NA non-coding downstream 12342 2130623 ~ 2130696 (-)
G148707 NA non-coding upstream 9756 2156256 ~ 2156817 (-)
LOC122328197 NA non-coding upstream 371937 2518437 ~ 2524302 (-)
LOC122327855 NA non-coding upstream 380594 2527094 ~ 2563223 (-)
G148749 NA non-coding upstream 445072 2591572 ~ 2592729 (-)
G148860 NA non-coding upstream 551613 2698113 ~ 2759687 (-)
LOC122328032 NA other downstream 26855 2114320 ~ 2116183 (-)
G148613 NA other downstream 478411 1661185 ~ 1664627 (-)
G148574 NA other downstream 488698 1643710 ~ 1654340 (-)
LOC122327995 NA other downstream 517131 1580290 ~ 1625907 (-)
gpr35.2 NA other upstream 98131 2244631 ~ 2250561 (-)
LOC122327369 LOC107566359,LOC107727552,LOC107702633,LOC107698598,LOC107549380,LOC107733351,LOC107733325,LOC107566366,LOC107727554 other upstream 904900 3051400 ~ 3065177 (-)
dnase1l4.1 zgc:101000,LOC107566350,LOC107712182,LOC107702655 other upstream 1077648 3224148 ~ 3232213 (-)
cers5 cers5,LOC107698577,LOC107590873,LOC107694004,LOC107718462,LOC107712190 other upstream 1108896 3255396 ~ 3273051 (-)
si:rp71-36a1.1 NA other upstream 1179075 3325575 ~ 3366122 (-)

Expression


Co-expression Network