LOC122327085


Basic Information

Item Value
gene id LOC122327085
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 7290672 ~ 7296555 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247596.1
GGATGGTCCGGGTTTGAGTCGCAAATAAAAACGGAGCACGGTGGGAAGGTGCCTTTTCCTTCGGACGTGAACGGTCGCATAATGGGCCTATTGACAAACTGCCTGAGCTTCCCCTGGGCGGACGACACATGAGTGGTGAGAGGTGGGACAGAATCCATTGAAAACAGATGTTCCCTCACCTAGCCAGCTATTTTCCAGCAGGGGCACGCAGGAGCGATTCTTCCACGCGACCTGAAGCGCCCTTTCAAAACACTCGCGCGCCAACGGAGGAGAGCGACGGCAATGCTGTGGTGAATGAATCTGAGCATCCGCACTTTTCGCACGTGCCTCGTAAGTGTCGATGTGATGGGCTGCCATAAGGCCCATTGGGTAGGTTCACTCTGTTAGCGTACTGATGATTTCAAGCCCCCACACGGAGCTCTCCGTGGAAGCCAATGATCCGTGACGGATAGGACGGTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247596.1 True 461 lncRNA 0.55 3 7290672 7296555

Neighbor

gene id symbol gene type direction distance location
cntnap5b cntnap5b,LOC107751476,LOC107569969,LOC107653604,LOC107739344,LOC107600954,LOC108411251,LOC105905662 coding downstream 6887 7234901 ~ 7283785 (-)
ahr2 ahr2,LOC107751478,LOC107687867,LOC107600952 coding downstream 184032 7058157 ~ 7106640 (-)
LOC122327118 LOC107751494,LOC107739353,LOC107653563,LOC107600951 coding downstream 288125 6997908 ~ 7002547 (-)
LOC122327115 LOC107687869,LOC107739325,LOC107653600,LOC107600976,LOC107754251 coding downstream 296038 6986565 ~ 6994634 (-)
LOC122327116 nab1a,LOC107687893,LOC107653562,LOC107739354,LOC107754250 coding downstream 318712 6962514 ~ 6971960 (-)
s100b s100b,LOC107687865,LOC107571703,LOC107600981 coding upstream 90502 7387057 ~ 7389184 (-)
aox5 aox5,LOC107600984,LOC107739315,LOC105905663 coding upstream 198106 7494661 ~ 7514404 (-)
LOC122327800 LOC107751463,LOC107571702,LOC107653569,LOC107687862,LOC107739318,LOC107687887,LOC107565490 coding upstream 218184 7514739 ~ 7515901 (-)
LOC122327121 LOC107751463,LOC107571702,LOC107653569,LOC107687862,LOC107739318,LOC107687887,LOC107565490,LOC107600988 coding upstream 221245 7517800 ~ 7518955 (-)
LOC122327123 LOC107687862,LOC107565490,LOC107751463,LOC107687887,LOC107571702,LOC107739318,LOC107653569,LOC107687863 coding upstream 225163 7521718 ~ 7522892 (-)
G150571 NA non-coding downstream 59184 7230690 ~ 7231488 (-)
G150564 NA non-coding downstream 93989 7196353 ~ 7196683 (-)
LOC122327846 NA non-coding downstream 116227 7171342 ~ 7174445 (-)
G150542 NA non-coding downstream 267975 7022401 ~ 7022697 (-)
G150538 NA non-coding downstream 285225 7005056 ~ 7005447 (-)
G150596 NA non-coding upstream 112858 7409413 ~ 7423399 (-)
LOC122327668 arl4ca,arl4c,LOC107600967,LOC107739351,LOC105905671,LOC106575223 non-coding upstream 153693 7450248 ~ 7470144 (-)
G150626 NA non-coding upstream 187309 7483864 ~ 7484934 (-)
G150628 NA non-coding upstream 189621 7486176 ~ 7498489 (-)
LOC122327778 NA non-coding upstream 328144 7624699 ~ 7628851 (-)
LOC122327113 ahr1b,LOC107586968,LOC107687868,LOC107751479,LOC107653601,LOC107739322,LOC107600975,LOC108410580 other downstream 235110 7020754 ~ 7055562 (-)
glsa glsa,LOC107754246,LOC107600978,LOC107739327,LOC107653599,LOC107586966,LOC107687871 other downstream 351672 6822203 ~ 6939000 (-)
LOC122327776 LOC107751486,LOC107656680,LOC107565498,LOC107653539,LOC107715642,LOC107600957,LOC107751482 other upstream 313301 7609856 ~ 7618398 (-)
tmem264 tmem264,LOC107715063,LOC107757465,LOC107665501,LOC107653574,LOC107588123,LOC107561895 other upstream 989817 8286372 ~ 8293208 (-)
zbtb37 zbtb37,LOC107588063,LOC107757486,LOC107653628,LOC107669814,LOC107715095,LOC107592718,LOC107592717,LOC107669813,LOC107715094,LOC107757485,LOC107588062,LOC107653629 other upstream 1303795 8600350 ~ 8612744 (-)
G151107 tal1,LOC107669848 other upstream 1587566 8884121 ~ 8886941 (-)
nfia nfia,LOC107592693,LOC107599440,LOC107653654 other upstream 1716993 9013548 ~ 9171931 (-)

Expression


Co-expression Network