LOC122327580


Basic Information

Item Value
gene id LOC122327580
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 6313175 ~ 6314227 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247652.1
AATTCGGGACCTTCACACTAGAAATGGCAGCACGAACCAAAAGGGTCATAAACATGTATGATGAGGATGTTACACACTGGACAGAGGATAGAAAAAAAGCCCTCAGAGATCAAAGGCTGGATGACAATCCAGATGTTCTTTTCAAATTGTTTGATCCACCTTATCCAAGCGATCTGGGCAATCTGTGCGGTCTGATCTTTAGACCCACTTCAGATCCAGTTCTGTGGATGAGATTAATCATAAATGGTTACAAAAGCCTCTCTCCTCAGTGGACTCACAGACGAGTTACAGAGCCAGCTCGAGATGTGATCAATATCAAGGGCAATGCAGGAGAAATGCGCACATTTATTAGAAACTTTCCAAATGATCTGCAAAAGAATGCTGTGGATCTGAATGCGGTGATGAAAAAACTTGAATTAACATAAGACAACGAAGATAATGAAGGGGGTGCCAAAACATGAGACGCCATGGTTTTATAAGACGGGATCTCATGAAGGCATGGAGATTTGCAACCAAACCAGATCTGGATCAAGCTTTTCTTGTATTTCTCTTCTCTGTTACAAATGTCACACCTCATTTTCCGGGTGAACTCCAAGCTCAGTGTCTGTATAAACACAAAACGTATTAAAGTTTTGATCACGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247652.1 True 644 lncRNA 0.41 2 6313175 6314227

Neighbor

gene id symbol gene type direction distance location
mettl21a mettl21a,LOC107663696,LOC107704411,LOC108415896 coding downstream 4864 6306421 ~ 6308311 (-)
dpp4 dpp4,LOC107663703,LOC107586951,LOC107755996,LOC107593097,LOC107745999,LOC107704406 coding downstream 11672 6286427 ~ 6301503 (-)
pcyt2 pcyt2,LOC107745976,LOC107756034,LOC107704410,LOC107593040,LOC107586950,LOC103356210,LOC105905797 coding downstream 31046 6272453 ~ 6282129 (-)
gnav1 gnav1,LOC107756032,LOC107745977,LOC107663576,LOC107586948,LOC107704417,LOC107593084,LOC106591843,LOC108259514 coding downstream 41818 6238357 ~ 6271357 (-)
slc26a11 slc26a11,LOC107663565,LOC107756030,LOC107745975,LOC107593041,LOC107704413,LOC107586945 coding downstream 82001 6221862 ~ 6231174 (-)
crygs1 crygs1,LOC107756035,LOC107586953,LOC107663530 coding upstream 4769 6318996 ~ 6322086 (-)
krt222 krt222,LOC107586952,LOC107663524,LOC107745982,LOC107653582,LOC107755987,LOC107593079 coding upstream 8206 6322433 ~ 6335997 (-)
ptpn4b ptpn4b,LOC107586954,LOC107653584,LOC107593078 coding upstream 33424 6347651 ~ 6375093 (-)
pth2rb LOC107739359,LOC107587008,LOC107663669,LOC107653586,LOC107746000,LOC107593036 coding upstream 80356 6394583 ~ 6414114 (-)
tmem163b tmem163b,tmem163,LOC107739337,LOC107586956,LOC107663488,LOC107745987,LOC107653588,LOC105909211,LOC103367750,LOC107381042 coding upstream 159554 6473781 ~ 6501308 (-)
G150273 NA non-coding downstream 129274 6157497 ~ 6183901 (-)
G150271 NA non-coding downstream 158159 6144878 ~ 6155016 (-)
G150234 tmprss9,LOC107704409,LOC107731339,LOC107593090,LOC107695615,LOC107586983 non-coding downstream 458008 5854785 ~ 5855167 (-)
G150233 NA non-coding downstream 458772 5854201 ~ 5854403 (-)
G150232 NA non-coding downstream 461285 5851285 ~ 5851890 (-)
G150216 krt97,krt96,LOC107663680,LOC107745983,LOC107593038,LOC107739339,LOC107580444 non-coding upstream 29912 6344139 ~ 6345150 (-)
G150322 NA non-coding upstream 63460 6377687 ~ 6381972 (-)
G150325 NA non-coding upstream 69929 6384156 ~ 6386767 (-)
G150453 NA non-coding upstream 283677 6597904 ~ 6599533 (-)
G150442 NA non-coding upstream 288828 6603055 ~ 6606554 (-)
gcga gcga,LOC107755995,LOC107663711,LOC107593098,LOC107704412,LOC107586984 other downstream 27595 6282456 ~ 6285580 (-)
G150276 npb,LOC107587005,LOC107663585,LOC107756033,LOC107704419,LOC107593099 other downstream 76310 6236252 ~ 6236865 (-)
use1 use1,LOC107756022,LOC107745970,LOC107593088 other downstream 320417 5989497 ~ 5992758 (-)
timm13 timm13,LOC107587003,LOC107731338,LOC106573564,LOC107593051 other downstream 451843 5859347 ~ 5861332 (-)
LOC122327537 NA other downstream 549193 5758006 ~ 5763982 (-)
G150440 r3hdm1,LOC107739334 other upstream 201338 6515565 ~ 6659352 (-)
cep70 cep70,LOC107739332,LOC107576760,LOC107653595,LOC107754238,LOC107576761,LOC107687877,LOC107587009,LOC107600947,LOC107682686 other upstream 400567 6714794 ~ 6728690 (-)
glsa glsa,LOC107754246,LOC107600978,LOC107739327,LOC107653599,LOC107586966,LOC107687871 other upstream 507976 6822203 ~ 6939000 (-)
nab1a nab1a,LOC107687893,LOC107653562,LOC107739354,LOC107754250,LOC107600950 other upstream 532663 6846890 ~ 6889657 (-)
mfsd6a mfsd6a,LOC107687869,LOC107739325,LOC107600976,LOC107653600,LOC107754251,LOC105022531 other upstream 550996 6865223 ~ 6873200 (-)

Expression


Co-expression Network