LOC122327595


Basic Information

Item Value
gene id LOC122327595
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 3576434 ~ 3578729 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247675.1
CTCGCTTCTCGCGTTCCACACCCGGCTTTGCCAGCTCGGGAGAAACAGAAAATGAGGGTGAATGGATTGTTGGGCATCGTGAGCTGTTTGATCGTGGCTTATAATTGTGCGTTTGGTGACGATGTGACAGTGAAGGAGGGCGATTCAGTCGTTCTGAAGACCGGTGTTAAGAAAAAGCCAGATGAAACGATGCTGTGGTATTACGAAGGCGCTCGATTGGCTGTAGTCAACAAGGATCCAAGCTCAAGCTGTAAATATGACGGAGAAGGCGGGAGATTCAAAGACAGACTGGAGGTGGACTACGAGACCGCATATCTGACCATCACGGACCTCAGACTTGAAGACTCTGGACGTTATGAAGCAGAGATTGTTAGAAGCATGAGTTCAGGCAGAACCCAAAGCTTGAACAGAAACCATGCAACGTGTGACAGCacaaaagtgataaaaaaacaaccttgGTGACACCATAAAATCAATTGAAGTTCATGTCGTAGACGAAACCAAAGAGGAATCCTCTTCAACTGGAACGATTATAGGTATTGGAATATTTGTCGCTCTGCTGGTTCTTGGTGGGATTGgctttgtaaaatataaaatctacaGAAAAG

Function

GO: NA

KEGG:

id description
ko04060 Cytokine-cytokine receptor interaction

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247675.1 True 608 lncRNA 0.45 4 3576434 3578729

Neighbor

gene id symbol gene type direction distance location
LOC122327542 NA coding downstream 16620 3556132 ~ 3559814 (-)
LOC122327410 LOC107712173 coding downstream 261357 3309263 ~ 3315077 (-)
LOC122327550 NA coding downstream 271230 3290510 ~ 3305204 (-)
LOC122327353 NA coding downstream 289918 3280609 ~ 3286516 (-)
LOC122327437 NA coding downstream 299035 3273135 ~ 3277399 (-)
LOC122327357 NA coding upstream 151782 3730511 ~ 3735990 (-)
LOC122327402 NA coding upstream 157412 3736141 ~ 3741922 (-)
LOC122328131 NA coding upstream 163518 3742247 ~ 3744520 (-)
LOC122328132 LOC107570673,LOC107575767 coding upstream 165817 3744546 ~ 3747804 (-)
LOC122327546 NA coding upstream 305784 3884513 ~ 3887580 (-)
G149126 NA non-coding downstream 4992 3547465 ~ 3571442 (-)
G149123 NA non-coding downstream 19606 3536141 ~ 3556828 (-)
G149124 NA non-coding downstream 31466 3544292 ~ 3544968 (-)
G149120 NA non-coding downstream 34237 3515185 ~ 3542197 (-)
G149117 NA non-coding downstream 127333 3377269 ~ 3449101 (-)
G149136 NA non-coding upstream 7330 3586059 ~ 3586849 (-)
G149408 NA non-coding upstream 105766 3684495 ~ 3872019 (-)
G149411 NA non-coding upstream 113428 3692157 ~ 3692921 (-)
G149413 LOC107753735,LOC107704490,LOC107663689,LOC107755986,LOC107702613,LOC107704403,LOC107704499,LOC107566340,LOC107702610 non-coding upstream 141442 3720171 ~ 3721187 (-)
G149435 NA non-coding upstream 249846 3828575 ~ 3829523 (-)
LOC122327341 NA other downstream 125005 3378032 ~ 3451429 (-)
LOC122327463 NA other downstream 132560 3424346 ~ 3443874 (-)
G149102 NA other downstream 161723 3388260 ~ 3414711 (-)
si:rp71-36a1.1 NA other downstream 210312 3325575 ~ 3366122 (-)
cers5 cers5,LOC107698577,LOC107590873,LOC107694004,LOC107718462,LOC107712190 other downstream 303383 3255396 ~ 3273051 (-)
LOC122328127 NA other upstream 66198 3644927 ~ 3652009 (-)
G149410 NA other upstream 112771 3691500 ~ 3878716 (-)
LOC122327411 NA other upstream 397202 3975931 ~ 4042369 (-)
G149491 NA other upstream 577763 4156492 ~ 4158981 (-)
LOC122327462 LOC107741386,LOC107698560 other upstream 693822 4272551 ~ 4281768 (-)

Expression


Co-expression Network