LOC122327596


Basic Information

Item Value
gene id LOC122327596
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 4054103 ~ 4055280 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247676.1
ataaatcaaacaCTAGGCAattgtcaataataataatttgcacacAACCAGTGTTGTATCTTTAAGCATGTATGATCATAACCTGAAAATGTgaacgtttttattatttaaataatgtagatGTTGTTTTTTGACTGAGATGCAGAAGATCCCGGCAGCGACGATCAACAGAGATCCAGCAGAAACAGAGACCAACGTGATCAGAGACACTGAGTCTGTAACAATAATCATTCATTAACATCAGTAAGAGTGACAGCATCTCCCTCCATCACCGACACCGACTCACCGAACACACCTGAAGAATATGAAGACAGCGTTTTTTTCATACAAAGCCAGAAAGCAGCTGCTATTGACATG

Function

GO:

id name namespace
GO:0022624 proteasome accessory complex cellular_component
GO:0008537 proteasome activator complex cellular_component
GO:0008234 cysteine-type peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247676.1 True 357 lncRNA 0.38 3 4054103 4055280

Neighbor

gene id symbol gene type direction distance location
LOC122327340 NA coding downstream 7395 4042658 ~ 4046708 (-)
LOC122327408 NA coding downstream 102999 3942128 ~ 3951104 (-)
LOC122328146 NA coding downstream 137599 3910034 ~ 3916504 (-)
LOC122327439 NA coding downstream 148106 3903931 ~ 3905997 (-)
LOC122328145 NA coding downstream 155639 3896983 ~ 3898464 (-)
LOC122327368 NA coding upstream 25960 4081240 ~ 4089707 (-)
LOC122327533 LOC107709400 coding upstream 104770 4160050 ~ 4171899 (-)
LOC122327373 NA coding upstream 121917 4177197 ~ 4181171 (-)
LOC122327540 NA coding upstream 130901 4186181 ~ 4189527 (-)
LOC122327362 NA coding upstream 139696 4194976 ~ 4199818 (-)
LOC122327593 NA non-coding downstream 14688 4038002 ~ 4039415 (-)
G149460 NA non-coding downstream 32506 3974163 ~ 4021597 (-)
G149461 LOC107602658 non-coding downstream 38009 3987404 ~ 4016094 (-)
G149447 NA non-coding downstream 124337 3928686 ~ 3929766 (-)
G149441 NA non-coding downstream 174193 3878779 ~ 3879910 (-)
G149467 NA non-coding upstream 6080 4061360 ~ 4063492 (-)
G149474 NA non-coding upstream 24087 4079367 ~ 4080205 (-)
G149476 NA non-coding upstream 39086 4094366 ~ 4098629 (-)
G149478 NA non-coding upstream 44131 4099411 ~ 4099703 (-)
G149479 NA non-coding upstream 44933 4100213 ~ 4100497 (-)
LOC122327411 NA other downstream 11734 3975931 ~ 4042369 (-)
G149410 NA other downstream 175387 3691500 ~ 3878716 (-)
LOC122328127 NA other downstream 402094 3644927 ~ 3652009 (-)
LOC122327341 NA other downstream 602674 3378032 ~ 3451429 (-)
G149491 NA other upstream 101212 4156492 ~ 4158981 (-)
LOC122327462 LOC107741386,LOC107698560 other upstream 217271 4272551 ~ 4281768 (-)
LOC122327456 NA other upstream 373525 4428805 ~ 4433500 (-)
LOC122327455 NA other upstream 427541 4482821 ~ 4486925 (-)
LOC122328156 NA other upstream 529863 4585143 ~ 4588422 (-)

Expression


Co-expression Network