LOC122327610


Basic Information

Item Value
gene id LOC122327610
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 5308250 ~ 5309890 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247691.1
acatttttgcattttgttataCCTCTGCAGATGTGTCTTGAATCATCTCCTTAGGGTAAACTCATTAGGATTCACTTCGGATCCCCTGGAAAACTGGCTTCAGCCGAAACTGAAACCTGTGAGTCATGCTGTTTTGcgacaaatatatttttagttggGATGGCATGAACTGCGTATTTAAAGTCTGCTGAGAGGAGTTATCTTCCACCAGCTAATACTGGACAAAAGCCAGAGCTACTTGAAACATGGCTTCTGATATTCTGGGCTTCAGCGCTGAAGAGAAAATAAGCATCTACAAGCTGACAGGTGCTGTGATGCATCTCAGAAACATGAAATTCAAGCAGAAGCAGAGAGAGGAGCAAGCTGAACCTGACGGCACTGAAGCTGAAGGCTACTGAGATTTTCCATGTAAACTGGCTGAAGATCTGCACTGTATCCAAAAGATATAAGGTTTGAGTTATCGCCATTGTTTCCTCATGCAAACACTTCACATTTTAGGCACTGTTGCTGAGATGAGTGTACTGTAATTTACTTTAGCTCTTCttacatatttaacatgttgaacaatcaaacttttttctttgtggCCGATAAAATCACCTGCCTCATAGGCCATGGGACTATGTTCTACCCCAGAGTGAAGGTCAGGTATGAGTTTGTGAGCAAAGGCCAAACATTGCCACAGGAAATCTAATGTTTTGAAGATAAAGGTTTCTTCTGCAGGTAAAATATAATGGCACAAATCACATGCTCGATTTCTCAGGTGAACAAATCATGTCATCAAATCAATGAGATGTTCTTGTGGATTGTCGTCTGCATCAATGAGATATTTGACACAAAGGAGCCAGGTCATTTCTTCACTGGTGTGTTCGACATCTCTGGATTTTGAGGTCTTCGATGTGTGACAGGAGTAAGAACTTgaattattgttgtattattagTTCAACAGCTTGGAGCAGCTTTGTATAAACTTTGGAAATGTGAAACTGCAACGGTTCTTCAACCACCACATGTCTGTGCTGGAGCAAGAGCAGTGCAAGAAAGAAGGCATTAAATGGGAATTTATTGAATTTGGTATGGATTTGGCTGCCTGAGTTGACCTCATTAAAAATTCACTAATGAAATTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247691.1 True 1128 lncRNA 0.40 2 5308250 5309890

Neighbor

gene id symbol gene type direction distance location
LOC122327497 LOC107659626 coding downstream 27327 5279478 ~ 5280923 (-)
LOC122327503 LOC107575528,LOC107709688,LOC107741386,LOC107568440 coding downstream 123964 5182941 ~ 5184286 (-)
LOC122327332 NA coding downstream 184999 5114167 ~ 5123251 (-)
LOC122327498 LOC107740712,LOC107755677 coding downstream 197589 5108760 ~ 5110661 (-)
LOC122328166 NA coding downstream 199699 5107353 ~ 5108551 (-)
LOC122327315 NA coding upstream 17396 5327286 ~ 5341934 (-)
LOC122327308 NA coding upstream 26834 5336724 ~ 5351569 (-)
LOC122327319 NA coding upstream 41325 5351215 ~ 5355113 (-)
LOC122327304 LOC107570597,LOC107658377,LOC107711545 coding upstream 45655 5355545 ~ 5373808 (-)
LOC122327375 LOC107570603,LOC107690762 coding upstream 63562 5373452 ~ 5378887 (-)
G150071 cacna2d2b,LOC107558272,LOC107653164,LOC107720977,LOC107655410 non-coding downstream 5012 5302860 ~ 5303238 (-)
G150060 NA non-coding downstream 31508 5273557 ~ 5276742 (-)
G150033 NA non-coding downstream 72790 5232171 ~ 5235460 (-)
G150025 LOC107683790,LOC107563976,LOC107744761 non-coding downstream 81376 5218835 ~ 5226874 (-)
G150017 NA non-coding downstream 104243 5201322 ~ 5204007 (-)
G150086 LOC107586973,LOC107676140,LOC107698552,LOC107712186,LOC107658401,LOC107676139,LOC107681664 non-coding upstream 108566 5418456 ~ 5470508 (-)
G150093 NA non-coding upstream 141546 5451436 ~ 5454332 (-)
G150092 LOC107658400 non-coding upstream 188051 5497941 ~ 5506152 (-)
G150121 NA non-coding upstream 198680 5508570 ~ 5512967 (-)
G150161 tbc1d20,LOC107658381,LOC107586998,LOC107573569,LOC107653176,LOC107720987 non-coding upstream 235378 5545268 ~ 5545768 (-)
LOC122327354 NA other downstream 154394 5145926 ~ 5153856 (-)
LOC122327545 NA other downstream 571390 4707874 ~ 4736860 (-)
LOC122328156 NA other downstream 719828 4585143 ~ 4588422 (-)
LOC122327455 NA other downstream 821325 4482821 ~ 4486925 (-)
LOC122327456 NA other downstream 874750 4428805 ~ 4433500 (-)
gls2b gls2b,LOC107658399,LOC107745412,LOC107653170,LOC108431573,LOC106566158,LOC105007068 other upstream 217340 5527230 ~ 5532809 (-)
bloc1s1 bloc1s1,LOC107573571,LOC107653169,LOC107745401,LOC107658402,LOC107720994,LOC107586997 other upstream 228666 5538556 ~ 5542080 (-)
nisch nisch,LOC107586977,LOC107593071,LOC107653160,LOC107755997 other upstream 328248 5638138 ~ 5652159 (-)
nol8 LOC107586918 other upstream 351851 5661741 ~ 5672809 (-)
LOC122327537 NA other upstream 448116 5758006 ~ 5763982 (-)

Expression


Co-expression Network