LOC122327760


Basic Information

Item Value
gene id LOC122327760
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 11490673 ~ 11492960 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247713.1
GGAATTAGCCGTGGGGAACAGAGACAAGCTCTCTTTCATACGGTTCTGGAGCCATAAGAGAAAGTGCAAAGGCTACAATGctgcaaataaaagaaaatattttgtagtcAAGAAGACGAGGTCATCAAGCTGTGGAGATGCTTGGTGAAAACGTTTGTGTGCAGACCGGGAGGGCCGAAACTCACGTCCCTGTTATTCTCCTCCAGAACCTGGTCGCTCTTGCTGAGAATGATGTCACATCCTCCGAGCAGCGGATCCGCTTCCTGCTCTGCCTCCTCCGCTTTTCTGTGTGATCTGCTGTATTGAATTCGCTTCAAGCTAGGATTTGTCCCTAAAATGTTCCTTCCCGTCATGTTTCATGATGTCTGCTTCTGAATCTGATGCTCAACGGTATTTATAAGCATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247713.1 True 405 lncRNA 0.47 3 11490673 11492960

Neighbor

gene id symbol gene type direction distance location
tle5 aes,LOC107586404,LOC107593322,LOC107699415,LOC108430095,LOC108271216 coding downstream 25598 11440216 ~ 11465075 (-)
tle2b si:dkey-42p8.3,LOC107719559,LOC107676970,LOC107699414,LOC108271164,LOC108430094 coding downstream 64592 11382193 ~ 11426081 (-)
trnaq-uug_21 NA coding downstream 142222 11348380 ~ 11348451 (-)
s1pr3a s1pr3a,LOC107676952,LOC107719654,LOC107729679,LOC107593356,LOC107699398,LOC107586462 coding downstream 185486 11301565 ~ 11305187 (-)
ankrd24 ankrd24,LOC107729675,LOC107719567 coding downstream 224518 11249988 ~ 11266155 (-)
LOC122327726 LOC107719667,LOC107699403,LOC107593325,LOC107676991,LOC107717979,LOC107586464,LOC100332608,LOC108270593 coding upstream 74057 11567017 ~ 11571678 (-)
LOC122327288 capn2b,LOC107565172,LOC107659328,LOC107722663,LOC107655378,LOC107755344 coding upstream 311855 11804815 ~ 11815578 (-)
LOC122327836 NA coding upstream 352906 11845866 ~ 11855677 (-)
LOC122327835 NA coding upstream 369835 11862795 ~ 11870285 (-)
rgs2 LOC107741538,LOC107564933,LOC107664962,LOC107560697,LOC107735525 coding upstream 537502 12030462 ~ 12032362 (-)
G151870 NA non-coding downstream 112614 11372129 ~ 11378059 (-)
G151858 NA non-coding downstream 193210 11297225 ~ 11297463 (-)
G151773 NA non-coding downstream 304754 11184230 ~ 11185919 (-)
G151775 NA non-coding downstream 310283 11179922 ~ 11180390 (-)
G151774 crlf1b,LOC107676985,LOC107729674,LOC107719637,LOC107577518 non-coding downstream 311241 11176563 ~ 11179432 (-)
G151889 NA non-coding upstream 16440 11509400 ~ 11518141 (-)
G151893 NA non-coding upstream 29070 11522030 ~ 11523422 (-)
G151896 NA non-coding upstream 35138 11528098 ~ 11530610 (-)
G151904 NA non-coding upstream 57238 11550198 ~ 11550870 (-)
G151919 NA non-coding upstream 94701 11587661 ~ 11589923 (-)
gna11a LOC107717982,LOC107676956,LOC107586405,LOC107699416,LOC107719558 other downstream 19 11465852 ~ 11490654 (-)
cks2 cks2,LOC107699408,LOC107593315,LOC107729701,LOC103026129,LOC108230759,LOC105927846,LOC106584418 other downstream 259424 11229974 ~ 11231249 (-)
rex1bd si:ch211-87h14.3,clg08h19orf60,cssa23h19orf60,LOC107676986,LOC107729673,LOC107593355,LOC107719569,LOC108439285,LOC103025814 other downstream 301981 11174143 ~ 11188692 (-)
oaz1a oaz1a,oaz1s,oaz1,LOC107719576,LOC107655198,LOC107586434 other downstream 495721 10935052 ~ 10994952 (-)
micos13 si:dkey-78l4.14,LOC107596903,LOC107719663,LOC107586453,LOC107675912,LOC107655188 other downstream 1068319 10419127 ~ 10422354 (-)
LOC122327290 LOC107655377,LOC107755342,LOC107565170,LOC107659327 other upstream 300613 11793573 ~ 11804698 (-)
LOC122327182 NA other upstream 348628 11841588 ~ 11845142 (-)
si:ch211-117l17.6 LOC107655409,LOC107715709,LOC107560696 other upstream 552509 12045469 ~ 12049538 (-)
G152276 wdr47,wdr47b,LOC107741541,LOC107664763,LOC107564929,LOC107715726,LOC107655405 other upstream 649882 12142842 ~ 12145575 (-)
polr3f polr3f,LOC107655353,LOC107715715 other upstream 864723 12357683 ~ 12363395 (-)

Expression


Co-expression Network