LOC122327778


Basic Information

Item Value
gene id LOC122327778
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 7624699 ~ 7628851 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247719.1
GCGTTCTTTACATATTAACACAGAATTTAACCACACAGACGAGAAGGACAAACACAGGAGGGATCTGCGCACCGCAGTCAGAGATGCCGCTAAAGGATTGTTTTTCatcagttttaaagaaaacatatgcatttctaaaacGACAttcttttttgttcctttttctaTCGAGTCTTTTGCTAATCGGATTTGAGGAGTTCATGGAGGTAGAAGTTTTTTCATGTCCGTGCAAACACGATCTGAACATACAAATAACTGTGTGCGTCTTCATCGGACccgctctttttatttttgaaatactctttctctttttaaggccttttaaagagaaatgcagTAATTGCTGTGCAGGAGCAGATGATGACAGACGACAGAACTGTCCTAGAGCTTTCATATCATGTCTGATTCCACCCGTAATGTGGGTCATCATCTTGTTACTTGATGGAGATTACTTTGCTTGTGCTATGACATATTGGAAAGGAACTTTCACGTTTGACAATCAGCTCAAAAGGTTGTGGTGTGAACCTGTGGAAAAGTTCAGAAATGTGACAGCGCTACGAAATTTGACTCAAACATATATCCATCAATCTCAGATTTATGGTTATGGTGTGAGTGCTGTCTTCATCGTCTTTCCAATTATCTATGTGGGAATTTGTGACTGCTGCGGAAAATCTGCCTGCTGATCCGAAGCTGGACATGActgaacacaaatgaataaatctgtTGCTCTCCAGCATCACACAGCCTGAGAACAGACATTGTATACATTGTATACCACTATATCTGTTTTAGAatactttaaatgcattcaaaaattaTAGCAGTGagcataaaattacataaaattgaATGGATTCGCCTCCAAAAGAGGACCCTGCCTCCTTTCTGCTCCCTAAAAgcgaaagtgaaagtaaaaaatatatacatattggtATTATATGCTGACATATCAATAACACAGGAAATGAAAGGACAGCTGATGCCTAGTTCCTCCATGAGTGGTTtcaactttttaataatttgtagttTTATACTTTGTGACATAATATGTGCTGAAAAAGCAATCTTTGTAAACTTGATACTGATACTGTCTAATAACATGTCCATgtattatattaactatataatacatatataataactatataataatttaataaactatttagTTTAATCATGGATATTACACACTGCAATCTTGAAGTGTTTATGAAACTATGCCAATGTTATATATTTCAAGCACAAGGAATGCCACTGTAAAGCAGCTTGATTCCTTTCATTCTTATTTCTGATTGTTCTGATGAtgctgttgtttgtttggaGTGACTTTTAAAACAGAACAATTCTGACCAAACTCAGTATTATTAATTGAACTTCCCTTAGTGCTGTGTTCTATACGTGTTTCTTTTAACCATaagttttgtgctttttattttttgtgcaaattaatatttttttttccattatagTTTATCTAGTctttaacagtaaaatatgat

Function

GO: NA

KEGG:

id description
ko04145 Phagosome
ko05140 Leishmaniasis

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247719.1 True 1499 lncRNA 0.35 3 7624699 7628851

Neighbor

gene id symbol gene type direction distance location
LOC122327777 NA coding downstream 2260 7619350 ~ 7622439 (-)
si:ch211-246m6.5 si:ch211-246m6.5,LOC107751466,LOC107656682,LOC107600990,LOC107739341,LOC107653538 coding downstream 23619 7548350 ~ 7601080 (-)
si:ch211-246m6.4 si:ch211-246m6.4,LOC107656681,LOC107751464,LOC107565497,LOC107739350,LOC107600989,LOC107653571,LOC107600970 coding downstream 82639 7537637 ~ 7542060 (-)
LOC122327064 LOC107751463,LOC107571702,LOC107687862,LOC107687887,LOC107739318,LOC107653569,LOC107565490,LOC107600988 coding downstream 99082 7524436 ~ 7525617 (-)
LOC122327123 LOC107687862,LOC107565490,LOC107751463,LOC107687887,LOC107571702,LOC107739318,LOC107653569,LOC107687863 coding downstream 101807 7521718 ~ 7522892 (-)
LOC122328180 NA coding upstream 1096 7629947 ~ 7631701 (-)
si:dkeyp-122a9.2 NA coding upstream 30482 7659333 ~ 7661731 (-)
lrp1ba lrp1ba,LOC107757468,LOC107653541 coding upstream 32937 7661788 ~ 7889885 (-)
elfn2a elfn2,LOC107665513,LOC107715073,LOC107757469,LOC107600993,LOC107653611,LOC107561914,LOC103909578 coding upstream 341494 7970345 ~ 8065690 (-)
mfng LOC107561915,LOC107715074,LOC107653613,LOC107757470,LOC107665528,LOC107600994 coding upstream 454589 8083440 ~ 8096442 (-)
G150628 NA non-coding downstream 126210 7486176 ~ 7498489 (-)
G150626 NA non-coding downstream 139765 7483864 ~ 7484934 (-)
LOC122327668 arl4ca,arl4c,LOC107600967,LOC107739351,LOC105905671,LOC106575223 non-coding downstream 154555 7450248 ~ 7470144 (-)
G150596 NA non-coding downstream 201300 7409413 ~ 7423399 (-)
LOC122327085 NA non-coding downstream 328144 7290672 ~ 7296555 (-)
LOC122328071 NA non-coding upstream 18260 7647111 ~ 7652174 (-)
G150706 NA non-coding upstream 229472 7858323 ~ 7866902 (-)
LOC122327072 NA non-coding upstream 271737 7900588 ~ 7952064 (-)
G150735 NA non-coding upstream 436981 8065832 ~ 8066111 (-)
G150786 LOC107665518,LOC107561911 non-coding upstream 481964 8110815 ~ 8259777 (-)
LOC122327776 LOC107751486,LOC107656680,LOC107565498,LOC107653539,LOC107715642,LOC107600957,LOC107751482 other downstream 6301 7609856 ~ 7618398 (-)
LOC122327113 ahr1b,LOC107586968,LOC107687868,LOC107751479,LOC107653601,LOC107739322,LOC107600975,LOC108410580 other downstream 569137 7020754 ~ 7055562 (-)
glsa glsa,LOC107754246,LOC107600978,LOC107739327,LOC107653599,LOC107586966,LOC107687871 other downstream 685699 6822203 ~ 6939000 (-)
tmem264 tmem264,LOC107715063,LOC107757465,LOC107665501,LOC107653574,LOC107588123,LOC107561895 other upstream 657521 8286372 ~ 8293208 (-)
zbtb37 zbtb37,LOC107588063,LOC107757486,LOC107653628,LOC107669814,LOC107715095,LOC107592718,LOC107592717,LOC107669813,LOC107715094,LOC107757485,LOC107588062,LOC107653629 other upstream 971499 8600350 ~ 8612744 (-)
G151107 tal1,LOC107669848 other upstream 1255270 8884121 ~ 8886941 (-)
nfia nfia,LOC107592693,LOC107599440,LOC107653654 other upstream 1384697 9013548 ~ 9171931 (-)
gpx4a gpx4a,LOC108429535 other upstream 1869818 9498669 ~ 9503006 (-)

Expression


Co-expression Network