LOC122327846


Basic Information

Item Value
gene id LOC122327846
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 7171342 ~ 7174445 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247727.1
GTATTGCTGTTCTTACTCCATCGTTattggttttttttcattgtccaGGAGAAAATTCCCAGTTGAATACCAGCTGAGATCTTCGTCTTGCCCATCCTACCTTTTTAGATGTCATATCTGGAGGGCGTCCCCGTCTTTTCCTTGTGTGCCAAATCGATTGCAGGTAAACTAATCTACTTTTTGAAGCCACCTGAATAAAGAAGCCCTCCAGACGAAAGCTTTTACGGTACATGCCAAGTGGAcagggaattgtgggattgCAGTCAATGGGGCCTGTCACGGTTTCCATGGTTGCTGTCTCCAGGGAGACACAAGATGAGAGAAGCATCAGTGCTGATATGGGTTCAGATGGCATGTGAATGGATATTGGCTCTATAAAGTCCTTAAAAACATTACCGCAATATGAAtgtggtggggtttttttatggGTTTATAAGAAATCCGCAGCACTATCCGTCTCTTAAAGGTTCAAGAGTTTCATgtgaatttagttttaaagatTGTATTCACTGATAATGgttcagtgattcagtgagATGTCAACTCTAGACCCTGTCAGACCAATTCAGTCAGATTTGTGAATTGTTCAATATGGTTTGTAAATGTATCAGTCAGTCAATTTCATGAACAAATTGTTCAGTCATTTGATAAACAGATCTCTTTGATTTGTGAGTGAATCAATCATTCTCACAAGTTCTATCAGTCATTCTGGGCTCATTCAGTGAATTATTCTATAATTTCAAGCTCAAGGTAGTTGATAGCAAAGGATTTGAAGGCCACGTTGATCAGGGCTACCGTGTTCTAAAAACCTGCTGTAAGCTACTTTGACTTTGTCATTGGACCAATGTCGATAAATTCGCCAATTTTCTGCTGAAAAGGACAAGACAGAGAAAGCCTTAGGGAATTTAACATTTACACCACTGTCATGAACTCAGAAAGACACAGCCCAAGGTAGGATTATGAACATAGCAAAGAGGTTCACACATTCTCTGAAAGAGCACCAGCGGCATTAGACAACATGAGCATTCACTTTAGCACGATCCTCAAAAAAAAAGGAGTGAAAACACAGGTGTGGGTTGAGATTTCCTCTCCTGTTGGCACTTTCTTCTCACTTAACGTGAAAGCCGCGCATACACATTTTATCCTGACTGAAAGGAAGATAGGACAGGGACAGGAAGTAGATACAGAGTCGCAATTTTTCTCTCGTCATACAGGCAGAAAATAATCGGCATGGAGCGATCTGGTCAACACGACCATACTCCCGCAGGAACAATAATAGCCTAGGAGTGCAGAAATAACCTAAAGTGCGCTGTACAGTGGGAACTCACACATGCTTCTACAGCAAACTGACACAAGTGTGTGCGCTacagtatctctctctctctgatacacacacacacacacacacacacactctgtgcgTGTCAGATTAAGTGGGAGTGTCGGTTTATCGTGGGTTCTCAGGGAGTCACAGGCTCTGAGCTGGAGGACTCACACAATGTGTCTTGCAGGCCTGATAGCAGCGTCCTCGGCGCTACGTGCTCCAGTTGACCAAGAGTCCAAGAGTCTGAGACCACTGAAgtatatacttaaatatttctgtttacttcaatacatttgttttattttgtatatgctGTATGGGGCTCAAACAAatccagtcattttttttttttaaattgagatttatacaccatctgaaagcagaataaatagttttttcattgatgtattgtttgttaggaAAGGACAGTATTTGGCAAAAACAATCTGAAGATGCaataaaaatctacattttgagaaaatcacctaTTAAAGATCTCCAGAGGAAGtccttagcgatgcatattactaatcagaactgttttgaaatatttatgatagGAAATAGACCTAATATCCAAAAGATTTGtgatttataaaagaaatatcaatcattttgacacaTACAATGTAcagctattgctacaaatacacccgTGCTTGGTTTTGGCCCTTGACCTTCATTAGATATCTATGCAAGTCATTATGGTATCACAATTTGTCTAATATTTATGtctataaaatgtcttttgtaaCACATCTTTTCATTGAACAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247727.1 True 2100 lncRNA 0.39 3 7171342 7174445

Neighbor

gene id symbol gene type direction distance location
ahr2 ahr2,LOC107751478,LOC107687867,LOC107600952 coding downstream 64702 7058157 ~ 7106640 (-)
LOC122327118 LOC107751494,LOC107739353,LOC107653563,LOC107600951 coding downstream 168795 6997908 ~ 7002547 (-)
LOC122327115 LOC107687869,LOC107739325,LOC107653600,LOC107600976,LOC107754251 coding downstream 176708 6986565 ~ 6994634 (-)
LOC122327116 nab1a,LOC107687893,LOC107653562,LOC107739354,LOC107754250 coding downstream 199382 6962514 ~ 6971960 (-)
LOC122328177 NA coding downstream 236769 6929150 ~ 6934573 (-)
cntnap5b cntnap5b,LOC107751476,LOC107569969,LOC107653604,LOC107739344,LOC107600954,LOC108411251,LOC105905662 coding upstream 60456 7234901 ~ 7283785 (-)
s100b s100b,LOC107687865,LOC107571703,LOC107600981 coding upstream 212612 7387057 ~ 7389184 (-)
aox5 aox5,LOC107600984,LOC107739315,LOC105905663 coding upstream 320216 7494661 ~ 7514404 (-)
LOC122327800 LOC107751463,LOC107571702,LOC107653569,LOC107687862,LOC107739318,LOC107687887,LOC107565490 coding upstream 340294 7514739 ~ 7515901 (-)
LOC122327121 LOC107751463,LOC107571702,LOC107653569,LOC107687862,LOC107739318,LOC107687887,LOC107565490,LOC107600988 coding upstream 343355 7517800 ~ 7518955 (-)
G150542 NA non-coding downstream 148645 7022401 ~ 7022697 (-)
G150538 NA non-coding downstream 165895 7005056 ~ 7005447 (-)
G150503 NA non-coding downstream 167224 7002960 ~ 7004118 (-)
G150494 NA non-coding downstream 230716 6939618 ~ 6940626 (-)
G150490 LOC107739322,LOC107653601,LOC107586968,LOC107687868,LOC107751479 non-coding downstream 268527 6899243 ~ 6902815 (-)
G150564 NA non-coding upstream 21908 7196353 ~ 7196683 (-)
G150571 NA non-coding upstream 56245 7230690 ~ 7231488 (-)
LOC122327085 NA non-coding upstream 116227 7290672 ~ 7296555 (-)
G150596 NA non-coding upstream 234968 7409413 ~ 7423399 (-)
LOC122327668 arl4ca,arl4c,LOC107600967,LOC107739351,LOC105905671,LOC106575223 non-coding upstream 275803 7450248 ~ 7470144 (-)
LOC122327113 ahr1b,LOC107586968,LOC107687868,LOC107751479,LOC107653601,LOC107739322,LOC107600975,LOC108410580 other downstream 115780 7020754 ~ 7055562 (-)
glsa glsa,LOC107754246,LOC107600978,LOC107739327,LOC107653599,LOC107586966,LOC107687871 other downstream 232342 6822203 ~ 6939000 (-)
G150492 ahr1b,LOC107653601,LOC107600975,LOC107751479,LOC107687868,LOC107586968,LOC107739322 other downstream 257784 6906000 ~ 6913558 (-)
nab1a nab1a,LOC107687893,LOC107653562,LOC107739354,LOC107754250,LOC107600950 other downstream 281685 6846890 ~ 6889657 (-)
mfsd6a mfsd6a,LOC107687869,LOC107739325,LOC107600976,LOC107653600,LOC107754251,LOC105022531 other downstream 298142 6865223 ~ 6873200 (-)
LOC122327776 LOC107751486,LOC107656680,LOC107565498,LOC107653539,LOC107715642,LOC107600957,LOC107751482 other upstream 435411 7609856 ~ 7618398 (-)
tmem264 tmem264,LOC107715063,LOC107757465,LOC107665501,LOC107653574,LOC107588123,LOC107561895 other upstream 1111927 8286372 ~ 8293208 (-)
zbtb37 zbtb37,LOC107588063,LOC107757486,LOC107653628,LOC107669814,LOC107715095,LOC107592718,LOC107592717,LOC107669813,LOC107715094,LOC107757485,LOC107588062,LOC107653629 other upstream 1425905 8600350 ~ 8612744 (-)
G151107 tal1,LOC107669848 other upstream 1709676 8884121 ~ 8886941 (-)
nfia nfia,LOC107592693,LOC107599440,LOC107653654 other upstream 1839103 9013548 ~ 9171931 (-)

Expression


Co-expression Network