LOC122328071


Basic Information

Item Value
gene id LOC122328071
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 7647111 ~ 7652174 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247773.1
TTGATGGCATTGTTGTGAAACGCAGCTTCTGTAAACTTTAGAGGCGATACGGAGAACTTGTTACGTGAGAACTTCTGGGCATTTGAAGTGGATGAGATGTTCTGGGGTTCTGAGAAAGAGGATATGAGTAGGGGGAAACAGTAACAGAAGAGCTGCTTAGATATCATAATTATAGAACCAATCACAATGCGATATGTTAGCTTTGATCATGCTTTATCATAGATATAAAAACATCTAGGCTCACGAGTCTCTGCTGCATCTACTGTAAGGAGGGTCCAGGCTGTGAATGAACTCAagacaaagtaaagaaaagGGAAACCAACAAGGTCATCAGACAAACTTACTGTGCACAGACCTCCAAAGATGCCTTTTCCGTTTTTAAGCCTATTTCAGGGCCATCTGGCCAAGATGAGCATTGTGACTTCAATTGCACTAAGCTTTTTGTTAATTGGTTTGCAGGCAATTATGGATGCAAAATTTGTGTGCCCGTGCATGCTTTTGTGGAATAAAATTATATCagcttttatttgcattactCCCGCCATCTTTGCTACAGTTGTAATGGTCTTATTTATAATGCCTTCTGAAGATACAAATCGTCGTAAAGCTTTCTTTTCAAGTTTTATTCCAGCTCTTGTCTGGAtctgtatatttttcattgatGGCGATTATCTTGCATGTGGACTAACATTCTGGGATGGACAATATacctgtgaaaaagaaaaatgtttcaattgGTGCAAACCCTACAATTTGACTATGGTCGAGACTTATTATGGCACAGCACAAACGTTCATTTCTATATCAAAGACTGCAGGTTATGGTCTGGCTGCTTTGTTGAGCATCATTATAATAACCGTAGCTGTGTGCTGTGACTGCTGCAGAAGTAGAACCACAGAACCACAGAACCAGAGGCCCACTAACTCAATGGAGATGAGCAACCAGCAGGACACAAGAAATTAAACCGTGACATGAAATAGCATCAGCTCTTGGGAACTTTTTGAAAGAGCCATCCCAGCAGGCACAAAATTCAACATAAATTCAACGTCTTATGTCAATGTTAAATTGACGTCCGATACAGACAACAGATGACGTTGATATTCACTGTTTTTAGACTGTGTTACCAAAATATTGGCCCAAacataattcacccaaaaatgaaaattccatCGTCATTTAGTCATCCCGAGTGGCTCcgaacctgtatgactttttttgttttgccgaatacaaaggaagatattttgtaaccaggctgtttttggtCAACATTGACTTCTATATTATTCTTTTGCTGCTAtcgaagtcaatggtgacccaaaactgcccttcaaaatatcttcctttgtgtttggcagaaagaaattcatacaggtttggaactaaaattttcatttccatgggtgaactatccctttaagaaacatacacacacacacatacacacacgcacacacacacacacagtaacaaCATTCAGTTTcaatatttattgcaaatattaaaccaaaagtAGAATTCATGAAAGCTTTGTTTTagataattacaaaaatgtactcCATATCAGAACATTTGCAAAGATTCAAATGCTGCTTCCTGTTGTTTGCTAGCATTACGTACATCTTGTCAAAGagataataaacatattttgagtTTCCCAAGCTGCCGTCGATTAATGAAGGTTTGAAGAAAGAACTTGCAGTTAAATTGGACTAAATCGGGAAGTGCCAAGACTTTTTTACCGACGTCTTTGATATTACTTTGGTTGCTGTTTCTTGACTCCCATTGCACTTTCATACAGACAAAATTCGAAACGCACCTGGAAGCTGCTGTGTGAACGAGACTCAGACCTTTAAAGAAAATACGGTTGTCAATCCCAAATAAAGGACTGACAACCGTATTCTGCAAAGAGGTGGAGTTTTGTGAAAGTTTTTATTGCGTCCAGCCATTCCAAAGGACTTTGGTGCAGCAGACTTTGACAGAAGCATACAGTGAAAGTGACTAAGGGGGATCTGTCAACCAAATAAAGACCCTGTGCACCGGATTACGGAATACAAGAGATCATTGTCAAAAGAAGCATCGTCAAACTTCCCTCATAAGATGCCGTTGCCACAAGATCTTTTGAAGAAACTACATCTAAATTCCTGAAATCTGTTGTTTTCAGCACTTTTCCATTGAGCTTTTTGTTAATCGGATTGGAGGCACTGATCGATCATCACTTCATGTGCCCATGAGgaccctttttttaataaactgctaACAGCATTCATCTTTATTGGACCtgctctttttagtttttttaatggtcCTCCGTTTAAGGCCTTCCAGACATGGATGGTTTCATTGCCTTGAAGGAGTAGACGTTGATACTCAGCAAAACTAGCCCAAAGCTCTCATATCTTCTGATTCCACCCGTGATGTGGATCTTCTTGTTGTTACTTGATGGTAAACACCTTGCTTGTGCCAACACATTCTGGCAAGGAGATTATGTTTTTGATACGGTTTGAAATTGGTCTTGGTGTAAACCACTTTTTGATGATCTCATCTCTTTTGAGGATTTTCTTGCCTTTATTGGATTGTCTCAgtttttgagATATGTTTGCATCACTGTCTTCAGTGCCTTGGCAATTGTCTTGGTATGTGTCTTGGTCTGCTGCATCAGTGGAAAATGTGACTGCTGCTGTTATGAACTGTTATGCTTCTGTGGACGAAGAGTGCCACCACCCTCCGAGCCACTAAATACACACAGGGAAGACATCAGCGGACAACAGGTTAATTTACAGCTTCAAGTTCTCACTGGCACCACCTCCAGCCATACAGACCCAaatgtgaaatacattttatatcattatttaaacaGCTTCTAAACATATACTCTCACATAGTGACTCAAAATATGAACTTAAagatgaatatttaatgcactaattatgcatttgtaatgcactttataatgcattgtataatataaagaatatttgCGACTACAGTTAAAGTGATAGCAAAACTACAATGTACAATTGCAGATCCAGAAACGCTTCCGTTTCATGTAACAAACTTAATTTTCTCTTTGTATCATTCATTGATAACCTCATACTACTGGATTATACTCATAACATCATGCAGTATATCAAACAAATCATGCATATAAAATCATAACAACACAGGTGCATATTCAATTTTGTGGTAGCTGGGCTAGCCAGCAGAGGGGGCCCTCACCGGAGTACTAGCAGTACTCCACTCCCTCGGCTTTCTTCTAcagtcatttcctgtttggggCTTTATACCCAGAAGCCCTTCTCAGACCCAGTATTGCCAGTTTACCTGCCTTACCAAGTCTTCTCTGTTCTAATCTTGACTGTTACCATCtgtatgatctctgcctgtttcTTTGACCCTCGATTCACGAACCTGCCCATTGGACACATTGCTATGATTGGACTGCCTTTCTGGTTTAGACTCACTGCCTGCCTTGTTTCTCTTGTCTCTTGGATTATCCCTGTGTTTGTCGAAAGATCGGACTGCCTCTTTGTTATTGACCCACTGCCTGTCTTATCATTTATGATTATTGCTGCTTCCCATTATaataaacatctgaaaaaaatgGCTTGTACGTCAGCTCCCGCAT

Function

GO:

id name namespace
GO:0002253 activation of immune response biological_process
GO:0006955 immune response biological_process
GO:0048584 positive regulation of response to stimulus biological_process
GO:0002376 immune system process biological_process
GO:0002682 regulation of immune system process biological_process
GO:0002684 positive regulation of immune system process biological_process
GO:0050776 regulation of immune response biological_process
GO:0050778 positive regulation of immune response biological_process

KEGG:

id description
ko05150 Staphylococcus aureus infection
ko05140 Leishmaniasis

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247773.1 True 3628 lncRNA 0.39 5 7647111 7652174

Neighbor

gene id symbol gene type direction distance location
LOC122328180 NA coding downstream 15410 7629947 ~ 7631701 (-)
LOC122327777 NA coding downstream 24672 7619350 ~ 7622439 (-)
si:ch211-246m6.5 si:ch211-246m6.5,LOC107751466,LOC107656682,LOC107600990,LOC107739341,LOC107653538 coding downstream 46031 7548350 ~ 7601080 (-)
si:ch211-246m6.4 si:ch211-246m6.4,LOC107656681,LOC107751464,LOC107565497,LOC107739350,LOC107600989,LOC107653571,LOC107600970 coding downstream 105051 7537637 ~ 7542060 (-)
LOC122327064 LOC107751463,LOC107571702,LOC107687862,LOC107687887,LOC107739318,LOC107653569,LOC107565490,LOC107600988 coding downstream 121494 7524436 ~ 7525617 (-)
si:dkeyp-122a9.2 NA coding upstream 7159 7659333 ~ 7661731 (-)
lrp1ba lrp1ba,LOC107757468,LOC107653541 coding upstream 9614 7661788 ~ 7889885 (-)
elfn2a elfn2,LOC107665513,LOC107715073,LOC107757469,LOC107600993,LOC107653611,LOC107561914,LOC103909578 coding upstream 318171 7970345 ~ 8065690 (-)
mfng LOC107561915,LOC107715074,LOC107653613,LOC107757470,LOC107665528,LOC107600994 coding upstream 431266 8083440 ~ 8096442 (-)
LOC122328182 patj,LOC107669802,LOC107731530,LOC107715056,LOC107653652,LOC107588105 coding upstream 508254 8160428 ~ 8166968 (-)
LOC122327778 NA non-coding downstream 18260 7624699 ~ 7628851 (-)
G150628 NA non-coding downstream 148622 7486176 ~ 7498489 (-)
G150626 NA non-coding downstream 162177 7483864 ~ 7484934 (-)
LOC122327668 arl4ca,arl4c,LOC107600967,LOC107739351,LOC105905671,LOC106575223 non-coding downstream 176967 7450248 ~ 7470144 (-)
G150596 NA non-coding downstream 223712 7409413 ~ 7423399 (-)
G150706 NA non-coding upstream 206149 7858323 ~ 7866902 (-)
LOC122327072 NA non-coding upstream 248414 7900588 ~ 7952064 (-)
G150735 NA non-coding upstream 413658 8065832 ~ 8066111 (-)
G150786 LOC107665518,LOC107561911 non-coding upstream 458641 8110815 ~ 8259777 (-)
G150798 NA non-coding upstream 477005 8129179 ~ 8233188 (-)
LOC122327776 LOC107751486,LOC107656680,LOC107565498,LOC107653539,LOC107715642,LOC107600957,LOC107751482 other downstream 28713 7609856 ~ 7618398 (-)
LOC122327113 ahr1b,LOC107586968,LOC107687868,LOC107751479,LOC107653601,LOC107739322,LOC107600975,LOC108410580 other downstream 591549 7020754 ~ 7055562 (-)
G150492 ahr1b,LOC107653601,LOC107600975,LOC107751479,LOC107687868,LOC107586968,LOC107739322 other downstream 733553 6906000 ~ 6913558 (-)
nab1a nab1a,LOC107687893,LOC107653562,LOC107739354,LOC107754250,LOC107600950 other downstream 757454 6846890 ~ 6889657 (-)
tmem264 tmem264,LOC107715063,LOC107757465,LOC107665501,LOC107653574,LOC107588123,LOC107561895 other upstream 634198 8286372 ~ 8293208 (-)
zbtb37 zbtb37,LOC107588063,LOC107757486,LOC107653628,LOC107669814,LOC107715095,LOC107592718,LOC107592717,LOC107669813,LOC107715094,LOC107757485,LOC107588062,LOC107653629 other upstream 948176 8600350 ~ 8612744 (-)
G151107 tal1,LOC107669848 other upstream 1231947 8884121 ~ 8886941 (-)
nfia nfia,LOC107592693,LOC107599440,LOC107653654 other upstream 1361374 9013548 ~ 9171931 (-)
gpx4a gpx4a,LOC108429535 other upstream 1846495 9498669 ~ 9503006 (-)

Expression


Co-expression Network