LOC122328197


Basic Information

Item Value
gene id LOC122328197
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 2518437 ~ 2524302 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247777.1
CTTGGACTGGGTCTGAACACGCGGACGCTTGGACTAGATTAAATGCAGTCGCCGATTCGATTGCGATATTGAAACGAGGAATAATTAACGTCGCCGTGGGAGTCATTCCAaatCCTGTCTGCATCACAGAAGTCGTCCAAACGCCGGCGGATCCGAAGATGCGCTTTTGAACGCGAGTTCTCACCCTCTTTACCTTTGAAACGCGGCACCTGGCCCAGCTCGTTACCACCTCCTCAATAATTCACGCACGCCTTTgcatcatgttttattcatacgCTAAAGGAAAGCACGTTCTAATTTAGCAACGGCATCTCATCCCAAACTCCACAGCTGTGGGCTGCGACGCGGTGACGTCACTACGACCCACCCCAGGGCTCGGGGAAGAGTGACAGGCGCCGCCGAAAGTCGGCGATTCCCCCGACGCTTCACCGCCGCTTTAAAAACCGTCCCACGGTTCATTTGTGTTCAGATACTGATAGAGAACTAATTAGCCGCTCCCGCAGGCTAACTCATCCGCGCGTTATTATGAAAATTAATGAATGGACTCCTTGATGGATATCACTCAGTTGATTATGCGCCGAGTTGCTTATGACTTCTGAGTTCCAGCGCGTAGGCGTCGCGCTTTTGGGTTTCGCTGCTGATCTTTACATCGTAAATGCAACAAGCGATGACTTTCGACGCTGCGGCAGCATTAGCCTCGCGCTCGCTGGAGTGATTCTCCTCACCCAGGCCTGTTATCTCCTCACATTTCATGTCGCCCCACTGTtcgtatttgtttgtttttgaaatgacaTAAAGCTGCTGGAAACGTTGAGGAAACCTGCTGCAACACCCAGAAAGCCGCAGCTCATTAGAGGGCCAGAAGTCGGCCAAGAGGCATCAATTACCACCGAGGGACATGGatcatatttataattacacggCACCGTGAACCATGAAAATCGTAATGTGGTTTAATCACCAGCTGTCTGTTCCCCAAGATCTCCACCTCTCCCTAACAAACGTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247777.1 True 1008 lncRNA 0.50 3 2518437 2524302

Neighbor

gene id symbol gene type direction distance location
ptprsa ptprd,LOC107559826,LOC107679075 coding downstream 48876 2297233 ~ 2469561 (-)
tbxa2r tbxa2r,LOC107744660,LOC107678103,LOC107559829,LOC107562097,LOC107679093,LOC107717168 coding downstream 229110 2282224 ~ 2289327 (-)
si:zfos-943e10.1 LOC107678111,LOC107717170,LOC107559831,LOC107562095,LOC107679086 coding downstream 248582 2256136 ~ 2269855 (-)
gpr35.1 LOC107717171,LOC107678099,LOC107580869,LOC107678091 coding downstream 262977 2251211 ~ 2255460 (-)
lonp1 lonp1,LOC107744642,LOC107679084,LOC107548847,LOC107678106 coding downstream 286566 2221839 ~ 2231871 (-)
kdm4b kdm4b,LOC107717157,LOC107742799,LOC107679073,LOC107561592,LOC107549366,LOC107660208,LOC108412081 coding upstream 166324 2690626 ~ 2733830 (-)
uhrf1 uhrf1,LOC107561590 coding upstream 210857 2735159 ~ 2748590 (-)
fbn2b fbn2b,fbn3,LOC107704489,LOC107742800,LOC108441289 coding upstream 260376 2784678 ~ 2849559 (-)
LOC122328226 LOC107549362,LOC107704491,LOC107742801 coding upstream 351756 2876058 ~ 2878821 (-)
trnad-guc_18 NA coding upstream 355262 2879564 ~ 2879635 (-)
G148707 NA non-coding downstream 361620 2156256 ~ 2156817 (-)
LOC122327838 NA non-coding downstream 385754 2129531 ~ 2132683 (-)
G148679 NA non-coding downstream 386257 2129842 ~ 2132180 (-)
trnag-gcc_103 NA non-coding downstream 387154 2131213 ~ 2131283 (-)
trnad-guc_17 NA non-coding downstream 387479 2130887 ~ 2130958 (-)
LOC122327855 NA non-coding upstream 2792 2527094 ~ 2563223 (-)
G148749 NA non-coding upstream 67270 2591572 ~ 2592729 (-)
G148860 NA non-coding upstream 173811 2698113 ~ 2759687 (-)
G148889 NA non-coding upstream 350109 2874411 ~ 2983937 (-)
LOC122327605 NA non-coding upstream 371658 2895960 ~ 2898650 (-)
gpr35.2 NA other downstream 267876 2244631 ~ 2250561 (-)
LOC122328032 NA other downstream 402254 2114320 ~ 2116183 (-)
G148613 NA other downstream 853810 1661185 ~ 1664627 (-)
G148574 NA other downstream 864097 1643710 ~ 1654340 (-)
LOC122327995 NA other downstream 892530 1580290 ~ 1625907 (-)
LOC122327369 LOC107566359,LOC107727552,LOC107702633,LOC107698598,LOC107549380,LOC107733351,LOC107733325,LOC107566366,LOC107727554 other upstream 527098 3051400 ~ 3065177 (-)
dnase1l4.1 zgc:101000,LOC107566350,LOC107712182,LOC107702655 other upstream 699846 3224148 ~ 3232213 (-)
cers5 cers5,LOC107698577,LOC107590873,LOC107694004,LOC107718462,LOC107712190 other upstream 731094 3255396 ~ 3273051 (-)
si:rp71-36a1.1 NA other upstream 801273 3325575 ~ 3366122 (-)
LOC122327341 NA other upstream 853730 3378032 ~ 3451429 (-)

Expression


Co-expression Network