LOC122328232


Basic Information

Item Value
gene id LOC122328232
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 10709044 ~ 10709110 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247780.1
ATTaatgatgattttaaaaattcttcACTTTGACCTGATTGTCTTGATGAGAGAAATTTGTCTGATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247780.1 True 67 snoRNA 0.28 1 10709044 10709110

Neighbor

gene id symbol gene type direction distance location
rgmd LOC107726535,LOC107655217,LOC107719593,LOC107596905,LOC107675903 coding upstream 245847 10457205 ~ 10463197 (+)
hsd11b1la hsd11b1la,LOC107719662,LOC107586454,LOC107655187,LOC100006793,LOC107675913 coding upstream 282737 10422888 ~ 10426307 (+)
LOC122328195 LOC107726533,LOC107596895 coding upstream 290828 10413349 ~ 10418216 (+)
LOC122328194 NA coding upstream 296590 10410257 ~ 10412454 (+)
LOC122327820 LOC107675898,LOC107726531 coding upstream 300561 10407145 ~ 10408483 (+)
hmg20b hmg20b,LOC107729671,LOC107586380,LOC107719660,LOC107655186,LOC107675902 coding downstream 7130 10716240 ~ 10720317 (+)
unc13a si:dkey-110c1.7,LOC107729682,LOC107655208,LOC107675908,LOC107719588 coding downstream 11990 10721100 ~ 10759871 (+)
foxq2 foxq2,LOC107729705,LOC107586390,LOC107655205,LOC107596879,LOC107719640,LOC107676973 coding downstream 146705 10855815 ~ 10857119 (+)
nfil3-4 LOC107676982,LOC107596882,LOC107655201,LOC107719579,LOC107729690,LOC107586432 coding downstream 214638 10923748 ~ 10930951 (+)
crlf1b crlf1b,LOC107729674,LOC107676985,LOC107719637 coding downstream 467398 11176508 ~ 11185087 (+)
G151592 NA non-coding upstream 39832 10666056 ~ 10669212 (+)
G151516 NA non-coding upstream 288008 10388550 ~ 10421036 (+)
G151487 NA non-coding upstream 360158 10347829 ~ 10348886 (+)
G151382 NA non-coding upstream 519872 10188578 ~ 10189172 (+)
G151373 NA non-coding upstream 521461 10185635 ~ 10187583 (+)
G151603 NA non-coding downstream 1403 10710513 ~ 10711972 (+)
G151624 mbd3,LOC108427158 non-coding downstream 68617 10777727 ~ 10840314 (+)
G151642 NA non-coding downstream 121748 10830858 ~ 10831344 (+)
G151703 NA non-coding downstream 223553 10932663 ~ 10932995 (+)
G151738 NA non-coding downstream 366786 11075896 ~ 11077069 (+)
gatad2ab gatad2ab,gatad2a,LOC107599456,LOC107728574,LOC107554816 other upstream 715603 9970622 ~ 9993441 (+)
LOC122328159 NA other upstream 745410 9923547 ~ 9963634 (+)
mef2b LOC107687723,LOC107554810,LOC107728551,LOC107719669,LOC107655235,LOC107599488 other upstream 798251 9895441 ~ 9910793 (+)
borcs8 borcs8,LOC107728595,LOC107554813,LOC107599453 other upstream 815537 9888163 ~ 9893507 (+)
G151232 NA other upstream 1128893 9577679 ~ 9580151 (+)
G151620 NA other downstream 96942 10806052 ~ 10837365 (+)
onecut3a onecut3,onecut3a,LOC107596910,LOC107676954,LOC107586457,LOC107719659,LOC107655183,LOC105938949 other downstream 165318 10874428 ~ 10892023 (+)
si:dkey-172o19.2 LOC107729689,LOC107676945,LOC107596881,LOC107719578 other downstream 208979 10918089 ~ 10922031 (+)
peak3 LOC107676959,LOC107729697,LOC107593354,LOC107655164,LOC107586433,LOC107719638,LOC107593339 other downstream 225925 10935035 ~ 10994944 (+)
mier2 LOC107729715,LOC107593358,LOC107676949,LOC107699399,LOC107719562,LOC107586401 other downstream 608997 11318107 ~ 11328230 (+)

Expression


Co-expression Network