trnai-aau_114


Basic Information

Item Value
gene id trnai-aau_114
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 2130623 ~ 2130696 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_2539
ggccggttagctcagttggttagagcgtggtgctaataacgccaaggtcgcgggttcgatCCCCGTACTGGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_2539 True 74 tRNA 0.59 1 2130623 2130696

Neighbor

gene id symbol gene type direction distance location
aqp12 NA coding downstream 1658 2124590 ~ 2128965 (-)
trnai-aau_113 NA coding downstream 2688 2127862 ~ 2127935 (-)
LOC122327992 NA coding downstream 6654 2120589 ~ 2123969 (-)
LOC122328100 NA coding downstream 16380 2112781 ~ 2114243 (-)
LOC122328124 NA coding downstream 167396 1959836 ~ 1963227 (-)
pak2b pak2b,pak2,LOC107741800,LOC107678112,LOC107679089 coding upstream 2045 2132741 ~ 2142363 (-)
pigx NA coding upstream 12342 2143038 ~ 2146500 (-)
ing5a ing5,ing5a,LOC107574595,LOC107678097,LOC107548837,LOC107679074,LOC108424972 coding upstream 17982 2148678 ~ 2155381 (-)
lmnb2 lmnb2,LOC107679080,LOC107678108,LOC107744643,LOC107741802 coding upstream 75787 2206483 ~ 2217633 (-)
lonp1 lonp1,LOC107744642,LOC107679084,LOC107548847,LOC107678106 coding upstream 91143 2221839 ~ 2231871 (-)
G148687 NA non-coding downstream 31686 2098217 ~ 2098937 (-)
G148663 NA non-coding downstream 172530 1952937 ~ 1958093 (-)
G148632 LOC106565674,LOC106583071 non-coding downstream 222876 1809065 ~ 1907747 (-)
G148630 irf6,LOC107698281,LOC107599105,LOC107662833 non-coding downstream 224694 1808166 ~ 1905929 (-)
trnad-guc_17 NA non-coding upstream 191 2130887 ~ 2130958 (-)
trnag-gcc_103 NA non-coding upstream 517 2131213 ~ 2131283 (-)
G148707 NA non-coding upstream 25560 2156256 ~ 2156817 (-)
LOC122328197 NA non-coding upstream 387741 2518437 ~ 2524302 (-)
LOC122327855 NA non-coding upstream 396398 2527094 ~ 2563223 (-)
LOC122328032 NA other downstream 14440 2114320 ~ 2116183 (-)
G148613 NA other downstream 465996 1661185 ~ 1664627 (-)
G148574 NA other downstream 476283 1643710 ~ 1654340 (-)
LOC122327995 NA other downstream 504716 1580290 ~ 1625907 (-)
gpr35.2 NA other upstream 113935 2244631 ~ 2250561 (-)
LOC122327369 LOC107566359,LOC107727552,LOC107702633,LOC107698598,LOC107549380,LOC107733351,LOC107733325,LOC107566366,LOC107727554 other upstream 920704 3051400 ~ 3065177 (-)
dnase1l4.1 zgc:101000,LOC107566350,LOC107712182,LOC107702655 other upstream 1093452 3224148 ~ 3232213 (-)
cers5 cers5,LOC107698577,LOC107590873,LOC107694004,LOC107718462,LOC107712190 other upstream 1124700 3255396 ~ 3273051 (-)
si:rp71-36a1.1 NA other upstream 1194879 3325575 ~ 3366122 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) trnai-aau-366 NA coding NW_023493704.1 JAAXML020000229.1 41794 ~ 41867 (+)
eurasian perch (Perca fluviatilis) trnai-aau_36 NA coding NC_053135.1 CM020932.1 4179633 ~ 4179706 (-)
bowfin (Amia calva) AMCG00011964 NA coding CM030138.1 CM030138.1 7416912 ~ 7434130 (-)
tiger barb (Puntius tetrazona) trnac-gca_82 NA coding NC_056709.1 CM032078.1 1139998 ~ 1140068 (-)