XLOC_006815


Basic Information

Item Value
gene id XLOC_006815
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 37009812 ~ 37012236 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013498
GTGAGAGCCATTATCTACAAATGCCAAAAGCATGGAACAGTGAAGAAGCTTCCCAGTAGTGGCCAACTGACcaaaattaattcaattcaattcagctttatttgtatagcgcttttacaatgtagattgtgtcaaagcagcttcacataaatggtcatagtaactggaacagtgtagttcagtttttagtgTTTTAAGAGAGTTTTAAGGACATTCCACCACAAacgtacattttcacttataaaaaacatGACAGGGCCTGACTTAAGCTTGTCCTCCTCAAAAATCATAC

Function

GO:

id name namespace
GO:0090085 regulation of protein deubiquitination biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013498 True 292 lncRNA 0.37 2 37009812 37012236

Neighbor

gene id symbol gene type direction distance location
XLOC_006814 NA coding downstream 12052 36995633 ~ 36997760 (-)
XLOC_006813 trim9 coding downstream 98694 36868365 ~ 36911118 (-)
XLOC_006812 pygl coding downstream 146773 36846789 ~ 36863039 (-)
XLOC_006811 nin coding downstream 164867 36800334 ~ 36844945 (-)
XLOC_006810 sav1 coding downstream 211608 36787077 ~ 36798204 (-)
XLOC_006816 syne2b coding upstream 63086 37075322 ~ 37127970 (-)
XLOC_006817 NA coding upstream 97976 37110212 ~ 37110536 (-)
XLOC_006818 si:dkeyp-77c8.1 coding upstream 159740 37171976 ~ 37180815 (-)
XLOC_006819 AL845493.1 coding upstream 166366 37178602 ~ 37178716 (-)
XLOC_006820 si:dkeyp-77c8.2 coding upstream 174067 37186303 ~ 37189560 (-)
XLOC_006471 BX537274.2 misc downstream 26744907 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 36183587 825904 ~ 826225 (-)
XLOC_006804 BX927407.1 non-coding downstream 397653 36587770 ~ 36612159 (-)
XLOC_006797 CR361558.1 non-coding downstream 610437 36399260 ~ 36399375 (-)
XLOC_006785 BX510990.1 non-coding downstream 1047346 35962350 ~ 35962466 (-)
XLOC_006784 NA non-coding downstream 1084328 35925042 ~ 35925484 (-)
XLOC_006829 NA non-coding upstream 515925 37528161 ~ 37535785 (-)
XLOC_006836 NA non-coding upstream 620390 37632626 ~ 37636598 (-)
XLOC_006842 NA non-coding upstream 1178285 38190521 ~ 38195214 (-)

Expression


Co-expression Network