G153966


Basic Information

Item Value
gene id G153966
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 1205479 ~ 1206602 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU227992
AAGGTGAACTTGTATATTGACcagttttatgataaaaaaacaaaaacaaactaaggTCATCTTAATTGATTCAATGTACTCTGTGTCAGTCGCATTtctaacagaaacagaacagTCTTGTTTTTACACCCTGTGTCGAAAGTTTTGTAAGAATAATGTACCAAACAGTTATTAATgacaaatgaagaataaataGCAACCTCCTTGTTCCTCTTGTTTTATCCTCCAGGGTTCTGGTAcctcttgctttattttttgtggttcctcctgttttattctccagggttctggttcctcatgttttattctccagggttctggttcctcctgttttattctccagggttctggttcctcttgTTTTATTCTCCAGGGTTCTGgttcactctcctctttaacgAACACCATTTTTTCCACAGATGATACTCCTTCCAGATTTCCCTGCTTGCTTCAAAACTTAGTCACGACTACGAGGATCAGAATATGACAGGTATTTATCGAACCGATTCAAAACGGTATTTTTCGCTTTACAGAAACAACCTTTCTAAAAGTGTGTATTAATGCAGCGTCACAGCAAACGCAACAGAGATCGCGGTGAAACCGAACATCTTCCTCTGAGG
>TU227995
CTTTAATAGCCACttccaaaacaaaataagaaatctCCATCGCCATTGGTCAGTTTTTCAGCAGGCAAGTTCGCTACTGTAAGTTTAAAGTAGTGTACTGTAAATGGATTTACAATAGTGAGGAAATACAGTAGTGACCCTATTTCCCCATAATCCTTTGCTGTTCACGgtaaaatacttttacattttacagtatcttactgtatatattacagACAAATACTGTTCAAAtgacaaatacaaaacactCACTGTATGCCAATACTCTCAGAGCAGCTGGAGATatgttaacattttacagtaacaaCAATACTAATACAGctattaattgtaaatattaatacacctttatttttaaaggaatatgcataatatatttgtatttgttaacaGTATTATTGTTAACAAATATTTACTAGAAGGCAATTCTATTGCCAGAATTTCAAGGTGAACTTGTATATTGACcagttttatgataaaaaaacaaaaacaaactaaggTCATCTTAATTGATTCAATGTACTCTGTGTCAGTCGCATTtctaacagaaacagaacagTCTTGTTTTTACACCCTGTGTCGAAAGTTTTGTAAGAATAATGTACCAAACAGTTATTAATgacaaatgaagaataaataGCAACCTCCTTGTTCCTCTTGTTTTATCCTCCAGGGTTCTGGTAcctcttgctttattttttgtggttcctcctgttttattctccagggttctggttcctcatgttttattctccagggttctggttcctcctgttttattctccagggttctggttcctcttgTTTTATTCTCCAGGGTTCTGgttcactctcctctttaacgAACACCATTTTTTCCACAGATGATACTCCTTCCAGATTTCCCTGCTTGCTTCAAAACTTAGTCACGACTACGAGGATCAGAATATGACAGGTATTTATCGAACCGATTCAAAACGGTATTTTTCGCTTTACAGAAACAACCTTTCTAAAAGTGTGTATTAATGCAGCGTCACAGCAAACGCAACAGAGATCGCGGTGAAACCGAACATCTTCCTCTGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227992 False 620 lncRNA 0.39 2 1205479 1206158
TU227995 True 1064 lncRNA 0.35 2 1205479 1206602

Neighbor

gene id symbol gene type direction distance location
b4galt5 b4galt5,LOC107736963,LOC107684873,LOC107656676,LOC107566184,LOC107725076 coding downstream 20813 1165023 ~ 1184666 (-)
zgc:113278 zgc:113278,LOC107714267,LOC107555798,LOC107736961,LOC107656677,LOC107684897,LOC108427771,LOC105906438,LOC107564801 coding downstream 110041 1087192 ~ 1095438 (-)
arl6ip5b arl6ip5b,arl6ip5,LOC107684895,LOC107656678,LOC107736957,LOC107564791,LOC107555805,LOC102786473 coding downstream 123734 1077808 ~ 1081745 (-)
srsf6a srsf6a,LOC108276344,LOC107714268 coding downstream 129812 1070758 ~ 1075667 (-)
si:ch211-10d23.5 LOC107675163,LOC107736956,LOC107564805,LOC107555797,LOC107684905,LOC107714265 coding downstream 135275 1065562 ~ 1070204 (-)
LOC122329156 nup210,LOC107675171,LOC107684885,LOC107555788,LOC107564796,LOC107736952 coding upstream 75519 1282121 ~ 1344566 (-)
LOC122328434 NA coding upstream 155400 1362002 ~ 1371474 (-)
LOC122329157 NA coding upstream 188827 1395429 ~ 1401790 (-)
LOC122328511 LOC107690110,LOC107567958,LOC107724207,LOC107578799 coding upstream 276110 1482712 ~ 1494028 (-)
LOC122329158 NA coding upstream 347660 1554262 ~ 1557987 (-)
LOC122328476 NA non-coding downstream 241902 960274 ~ 963577 (-)
G153893 cnbp non-coding downstream 305713 841719 ~ 899766 (-)
G153911 NA non-coding downstream 429429 770513 ~ 776050 (-)
G153760 NA non-coding downstream 522368 679034 ~ 683111 (-)
LOC122328559 NA non-coding downstream 620988 583143 ~ 584491 (-)
G153967 NA non-coding upstream 98 1206700 ~ 1207587 (-)
G153984 LOC107727750,LOC107691341,LOC107566873 non-coding upstream 182760 1389362 ~ 1393135 (-)
LOC122328606 NA non-coding upstream 213255 1419857 ~ 1420454 (-)
LOC122328609 NA non-coding upstream 387010 1593612 ~ 1594209 (-)
LOC122328398 LOC107678070 non-coding upstream 398010 1604612 ~ 1606221 (-)
l3mbtl1 l3mbtl1,LOC107736954,LOC107564793,LOC107684891,LOC107675169 other downstream 140705 1053377 ~ 1064774 (-)
vgll4a LOC107675174,LOC107736947,LOC107713758,LOC107684880,LOC107555803,LOC107574679 other downstream 323295 865477 ~ 882184 (-)
ndnl2 ndnl2,LOC107736943,LOC107568481,LOC107714263,LOC107660884 other downstream 419600 779085 ~ 785879 (-)
smim29 si:dkey-226k3.4,LOC107690111,LOC107567962,LOC107724208,LOC107738791,LOC107678078,LOC107571229 other upstream 301096 1507698 ~ 1512329 (-)
LOC122328833 LOC107669693 other upstream 896108 2102710 ~ 2116883 (-)
LOC122328838 LOC107680059,LOC107748448,LOC107565963 other upstream 1562880 2769482 ~ 2839047 (-)
LOC122328849 LOC107718007,LOC107687303,LOC107571802,LOC107748430,LOC107680054,LOC107565975 other upstream 1580694 2787296 ~ 2798533 (-)
si:zfos-905g2.1 si:zfos-905g2.1 other upstream 1663016 2869618 ~ 2874758 (-)

Expression


Co-expression Network