G154057


Basic Information

Item Value
gene id G154057
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 1706275 ~ 1706595 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU228118
GCTGTGTTAAATAGGATTCTGCGTGTGTTTCTGCGAGTCGGACGTCTATGCCCGTGTACACCTGTTCTGCATAAGCGCTTGAAAGTCACGCCGATAACACTCGGGGGCTTTCAAGTGCACTGGGGTCAATACATCAATGCGCTTCACCGTTCTTATACCCCtctttttccctcctttttgCTCTTTTCTTCGCATACAGTATCCCTgcgcagagagacagaggaatatatatatatacaattaaaataaaaaaaatcaagaaacaGCATTCCGCTCTACGGTGTACAGAAGACGCTAACGATAAGAATCAATAACAATTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228118 True 321 lncRNA 0.43 1 1706275 1706595

Neighbor

gene id symbol gene type direction distance location
spata2 spata2,LOC107703616,LOC107562628,LOC107713568,LOC107680738 coding downstream 54990 1645987 ~ 1651285 (-)
LOC122329162 LOC107678070,LOC107571224,LOC107705859,LOC107571225,LOC107678080,LOC107738794 coding downstream 87264 1617587 ~ 1619011 (-)
LOC122329161 LOC107678070,LOC107571224,LOC107705859 coding downstream 93269 1610269 ~ 1613006 (-)
LOC122329159 LOC107678070,LOC107571224,LOC107705859,LOC107571225,LOC107678080,LOC107738794 coding downstream 97644 1606277 ~ 1608631 (-)
LOC122329158 NA coding downstream 148288 1554262 ~ 1557987 (-)
dhx35 dhx35,zgc:158828,LOC102790768 coding upstream 216592 1923187 ~ 1934838 (-)
rab5if c23h20orf24,LOC107680731,LOC107713559,LOC107703615,LOC107557487,LOC107562621,LOC107747730,LOC103366025 coding upstream 229529 1936124 ~ 1939390 (-)
plcg1 plcg1,LOC107703619 coding upstream 245555 1952150 ~ 1980965 (-)
top1b top1,LOC107562625,LOC107703620,LOC103147358,LOC107087615,LOC102223196,LOC106964922 coding upstream 276054 1982649 ~ 1996005 (-)
zgc:114123 LOC107723025,LOC107663206,LOC107557489 coding upstream 292104 1998699 ~ 2003597 (-)
G154056 NA non-coding downstream 216 1705788 ~ 1706059 (-)
G154054 NA non-coding downstream 8579 1697403 ~ 1697696 (-)
G154053 NA non-coding downstream 9480 1696475 ~ 1696795 (-)
G154052 NA non-coding downstream 11141 1694775 ~ 1695134 (-)
G154051 NA non-coding downstream 11513 1694175 ~ 1694762 (-)
G154058 NA non-coding upstream 544 1707139 ~ 1707455 (-)
G154061 NA non-coding upstream 5137 1711732 ~ 1712042 (-)
G154064 NA non-coding upstream 8648 1715243 ~ 1715971 (-)
G154077 NA non-coding upstream 101960 1808555 ~ 1809005 (-)
G154188 NA non-coding upstream 339728 2046323 ~ 2046544 (-)
smim29 si:dkey-226k3.4,LOC107690111,LOC107567962,LOC107724208,LOC107738791,LOC107678078,LOC107571229 other downstream 193946 1507698 ~ 1512329 (-)
l3mbtl1 l3mbtl1,LOC107736954,LOC107564793,LOC107684891,LOC107675169 other downstream 641501 1053377 ~ 1064774 (-)
vgll4a LOC107675174,LOC107736947,LOC107713758,LOC107684880,LOC107555803,LOC107574679 other downstream 824091 865477 ~ 882184 (-)
ndnl2 ndnl2,LOC107736943,LOC107568481,LOC107714263,LOC107660884 other downstream 920396 779085 ~ 785879 (-)
LOC122328833 LOC107669693 other upstream 396115 2102710 ~ 2116883 (-)
LOC122328838 LOC107680059,LOC107748448,LOC107565963 other upstream 1062887 2769482 ~ 2839047 (-)
LOC122328849 LOC107718007,LOC107687303,LOC107571802,LOC107748430,LOC107680054,LOC107565975 other upstream 1080701 2787296 ~ 2798533 (-)
si:zfos-905g2.1 si:zfos-905g2.1 other upstream 1163023 2869618 ~ 2874758 (-)
G154446 NA other upstream 1218453 2925048 ~ 2957272 (-)

Expression


Co-expression Network