G154058


Basic Information

Item Value
gene id G154058
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 1707139 ~ 1707455 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU228119
TGAAAACGCAGCGTTCGTGTTGCAGCCGATCGGCTCTTTCAGCTGTGCGGATATAAGAGCGCAAACTGCTTGAAATACGTAAATAGTTATTgctttctatattatataaatgcctCTTCTGTAATGTGCGGGAAAGCTAAATATTGTGTTTAGCGCAGATGACgaatgataaaacaaatagaATATAGCAAGTGGTgaaatatgaagaaatataAACAGTGGTAAGACACCAACTAGAAACCGCGCAGTTgaatatgtgtaatatttataaattaaatgtgaattcGGTTTGAATTGTGCAAATTGGAATCAAACCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228119 True 317 lncRNA 0.36 1 1707139 1707455

Neighbor

gene id symbol gene type direction distance location
spata2 spata2,LOC107703616,LOC107562628,LOC107713568,LOC107680738 coding downstream 55854 1645987 ~ 1651285 (-)
LOC122329162 LOC107678070,LOC107571224,LOC107705859,LOC107571225,LOC107678080,LOC107738794 coding downstream 88128 1617587 ~ 1619011 (-)
LOC122329161 LOC107678070,LOC107571224,LOC107705859 coding downstream 94133 1610269 ~ 1613006 (-)
LOC122329159 LOC107678070,LOC107571224,LOC107705859,LOC107571225,LOC107678080,LOC107738794 coding downstream 98508 1606277 ~ 1608631 (-)
LOC122329158 NA coding downstream 149152 1554262 ~ 1557987 (-)
dhx35 dhx35,zgc:158828,LOC102790768 coding upstream 215732 1923187 ~ 1934838 (-)
rab5if c23h20orf24,LOC107680731,LOC107713559,LOC107703615,LOC107557487,LOC107562621,LOC107747730,LOC103366025 coding upstream 228669 1936124 ~ 1939390 (-)
plcg1 plcg1,LOC107703619 coding upstream 244695 1952150 ~ 1980965 (-)
top1b top1,LOC107562625,LOC107703620,LOC103147358,LOC107087615,LOC102223196,LOC106964922 coding upstream 275194 1982649 ~ 1996005 (-)
zgc:114123 LOC107723025,LOC107663206,LOC107557489 coding upstream 291244 1998699 ~ 2003597 (-)
G154057 NA non-coding downstream 544 1706275 ~ 1706595 (-)
G154056 NA non-coding downstream 1080 1705788 ~ 1706059 (-)
G154054 NA non-coding downstream 9443 1697403 ~ 1697696 (-)
G154053 NA non-coding downstream 10344 1696475 ~ 1696795 (-)
G154052 NA non-coding downstream 12005 1694775 ~ 1695134 (-)
G154061 NA non-coding upstream 4277 1711732 ~ 1712042 (-)
G154064 NA non-coding upstream 7788 1715243 ~ 1715971 (-)
G154077 NA non-coding upstream 101100 1808555 ~ 1809005 (-)
G154188 NA non-coding upstream 338868 2046323 ~ 2046544 (-)
G154194 NA non-coding upstream 370109 2077564 ~ 2079496 (-)
smim29 si:dkey-226k3.4,LOC107690111,LOC107567962,LOC107724208,LOC107738791,LOC107678078,LOC107571229 other downstream 194810 1507698 ~ 1512329 (-)
l3mbtl1 l3mbtl1,LOC107736954,LOC107564793,LOC107684891,LOC107675169 other downstream 642365 1053377 ~ 1064774 (-)
vgll4a LOC107675174,LOC107736947,LOC107713758,LOC107684880,LOC107555803,LOC107574679 other downstream 824955 865477 ~ 882184 (-)
ndnl2 ndnl2,LOC107736943,LOC107568481,LOC107714263,LOC107660884 other downstream 921260 779085 ~ 785879 (-)
LOC122328833 LOC107669693 other upstream 395255 2102710 ~ 2116883 (-)
LOC122328838 LOC107680059,LOC107748448,LOC107565963 other upstream 1062027 2769482 ~ 2839047 (-)
LOC122328849 LOC107718007,LOC107687303,LOC107571802,LOC107748430,LOC107680054,LOC107565975 other upstream 1079841 2787296 ~ 2798533 (-)
si:zfos-905g2.1 si:zfos-905g2.1 other upstream 1162163 2869618 ~ 2874758 (-)
G154446 NA other upstream 1217593 2925048 ~ 2957272 (-)

Expression


Co-expression Network