G154277


Basic Information

Item Value
gene id G154277
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 2479885 ~ 2480254 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU228445
TCCCACTTCATTCTTTTGGAAAAGCAAAGGCAACGAGAATAGATCCAGAATAAAACATCCAGTTCTCCATCCACTTGATGTCTGTATTCAAAGTTCAGTCTACCATCATAAGCTCAACACATAACCACAGATGTAAAGGGACCGGATCAAGGGCTTTTTATATAAGCACCATTCCCTGATTGACTTAACCAGAAAAGcatgaaaatgcaaaagtatACCTTTCAACCAAAGCTTGACGATGCAGTTtgcaatttcattttcaaagcatAGCATGTTTTCATAGCACTCAATCACTCACACAAAAAATATGCTACAGCAGGCATTATAGCATCGCACATAATAATATAGGCCTATACTATAAACAGGGCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228445 True 370 lncRNA 0.38 1 2479885 2480254

Neighbor

gene id symbol gene type direction distance location
LOC122328840 LOC107669688,LOC107710232,LOC107710235,LOC107570773,LOC107570771 coding downstream 360 2464186 ~ 2479525 (-)
cpeb2 cpeb2,LOC107723019 coding downstream 210978 2245740 ~ 2268907 (-)
LOC122328872 c1qtnf7,LOC107670563,LOC107549168,LOC107723016,LOC107669695,LOC107710240 coding downstream 239234 2234831 ~ 2240651 (-)
cc2d2a cc2d2a coding downstream 246297 2214388 ~ 2233588 (-)
LOC122328830 LOC107723018,LOC107710237,LOC107669689,LOC107558796 coding downstream 297876 2140832 ~ 2182009 (-)
epm2a epm2a,LOC107718005 coding upstream 221561 2701815 ~ 2714305 (-)
fbxo30b fbxo30b,LOC107718004,LOC107680062,LOC107571806,LOC107687300,LOC107565976,LOC107735267 coding upstream 234243 2714497 ~ 2720029 (-)
LOC122328868 LOC107565964,LOC107571805,LOC107718002,LOC107680061 coding upstream 243587 2723841 ~ 2726856 (-)
LOC122329165 LOC107571805,LOC107687299,LOC107565964,LOC107718002,LOC107748429,LOC107680061 coding upstream 246576 2726830 ~ 2729496 (-)
LOC122329166 LOC107571805,LOC107718002,LOC107687299,LOC107748429,LOC107565964,LOC107680061 coding upstream 250568 2730822 ~ 2759122 (-)
G154247 ndnf,LOC107549170,LOC107723023,LOC107698518,LOC107710242,LOC107558793 non-coding downstream 175477 2301610 ~ 2304408 (-)
G154246 NA non-coding downstream 179319 2300255 ~ 2300566 (-)
G154245 NA non-coding downstream 191382 2288267 ~ 2288503 (-)
LOC122328884 NA non-coding downstream 377727 2099254 ~ 2102158 (-)
G154200 NA non-coding downstream 382877 2096784 ~ 2097008 (-)
G154278 LOC107549161,LOC107719954 non-coding upstream 353 2480607 ~ 2480873 (-)
G154288 NA non-coding upstream 8491 2488745 ~ 2583087 (-)
G154336 utrn,LOC107710234,LOC107549160,LOC107669681 non-coding upstream 167900 2648154 ~ 2656582 (-)
G154338 NA non-coding upstream 179296 2659550 ~ 2659861 (-)
G154391 NA non-coding upstream 341066 2821320 ~ 2823072 (-)
LOC122328833 LOC107669693 other downstream 363002 2102710 ~ 2116883 (-)
smim29 si:dkey-226k3.4,LOC107690111,LOC107567962,LOC107724208,LOC107738791,LOC107678078,LOC107571229 other downstream 967556 1507698 ~ 1512329 (-)
l3mbtl1 l3mbtl1,LOC107736954,LOC107564793,LOC107684891,LOC107675169 other downstream 1415111 1053377 ~ 1064774 (-)
vgll4a LOC107675174,LOC107736947,LOC107713758,LOC107684880,LOC107555803,LOC107574679 other downstream 1597701 865477 ~ 882184 (-)
ndnl2 ndnl2,LOC107736943,LOC107568481,LOC107714263,LOC107660884 other downstream 1694006 779085 ~ 785879 (-)
LOC122328838 LOC107680059,LOC107748448,LOC107565963 other upstream 289228 2769482 ~ 2839047 (-)
LOC122328849 LOC107718007,LOC107687303,LOC107571802,LOC107748430,LOC107680054,LOC107565975 other upstream 307042 2787296 ~ 2798533 (-)
si:zfos-905g2.1 si:zfos-905g2.1 other upstream 389364 2869618 ~ 2874758 (-)
G154446 NA other upstream 444794 2925048 ~ 2957272 (-)
G154445 NA other upstream 445051 2925305 ~ 2951628 (-)

Expression


Co-expression Network