G154407


Basic Information

Item Value
gene id G154407
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 2852619 ~ 2853230 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU228633
tctgtctttttttctcttcgacTTCCACCTGTCTTTTATCAGCCTGCTCTTGCCACTTCGTCGCTTCAATtaattgaagtttcaacagatcaaccttttttcccttggctaaggataaatcaacctctattttgtttattaagagagcgcagtcccttttgactaatttaccactgaaatcatattttttattccactcattgagatatcgcacactgtctgccgaatctgcatgcataaactttggatctcccatcaatttactttttcctgcacccatttttgctttttggtaagagtcaacgattagtcacacgtctgatcagatcgtccactgcaccaagcttctacagacactaatttgtctgcggatacagccgtctgaacaaaccaacttttcaattttgactcaaacccaatacaaattttatgtttgaacaacacaactccccttctagtggggaaaaatatcagttgtgttattcctaaaccacaacaaccaccttattcaccgtaaatcctagtgattcacaatgacgttcatacaacacattcataccattcataccctgcgcgcttagaacaattttttgtcgacaaaccaatgtccca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228633 True 612 lncRNA 0.39 1 2852619 2853230

Neighbor

gene id symbol gene type direction distance location
LOC122329166 LOC107571805,LOC107718002,LOC107687299,LOC107748429,LOC107565964,LOC107680061 coding downstream 93497 2730822 ~ 2759122 (-)
LOC122329165 LOC107571805,LOC107687299,LOC107565964,LOC107718002,LOC107748429,LOC107680061 coding downstream 123123 2726830 ~ 2729496 (-)
LOC122328868 LOC107565964,LOC107571805,LOC107718002,LOC107680061 coding downstream 125763 2723841 ~ 2726856 (-)
fbxo30b fbxo30b,LOC107718004,LOC107680062,LOC107571806,LOC107687300,LOC107565976,LOC107735267 coding downstream 132590 2714497 ~ 2720029 (-)
epm2a epm2a,LOC107718005 coding downstream 138314 2701815 ~ 2714305 (-)
frmd4bb frmd4bb,LOC107558919,LOC107687288,LOC107709245,LOC107704625,LOC107748434 coding upstream 161386 3014616 ~ 3062072 (-)
LOC122328867 LOC107558923,LOC107687304,LOC107709232,LOC107748446 coding upstream 241833 3095063 ~ 3099888 (-)
LOC122328874 LOC107704620,LOC107748451 coding upstream 248838 3102068 ~ 3106940 (-)
tmem106c tmem106c,LOC107697039,LOC107704621,LOC107558924 coding upstream 253777 3107007 ~ 3113429 (-)
LOC122328875 LOC107709230,LOC107558910,LOC107696973,LOC107704617,LOC107554205,LOC107748447 coding upstream 261462 3114692 ~ 3120743 (-)
G154405 NA non-coding downstream 1095 2851314 ~ 2851524 (-)
G154404 NA non-coding downstream 5000 2847358 ~ 2847619 (-)
G154391 NA non-coding downstream 29547 2821320 ~ 2823072 (-)
G154338 NA non-coding downstream 192758 2659550 ~ 2659861 (-)
G154336 utrn,LOC107710234,LOC107549160,LOC107669681 non-coding downstream 196037 2648154 ~ 2656582 (-)
G154406 NA non-coding upstream 3358 2856588 ~ 2860182 (-)
G154412 NA non-coding upstream 14241 2867471 ~ 2868951 (-)
G154420 NA non-coding upstream 47341 2900571 ~ 2900823 (-)
G154442 NA non-coding upstream 70812 2924042 ~ 2938624 (-)
G154444 NA non-coding upstream 71780 2925010 ~ 2932237 (-)
LOC122328838 LOC107680059,LOC107748448,LOC107565963 other downstream 13572 2769482 ~ 2839047 (-)
LOC122328849 LOC107718007,LOC107687303,LOC107571802,LOC107748430,LOC107680054,LOC107565975 other downstream 54086 2787296 ~ 2798533 (-)
LOC122328833 LOC107669693 other downstream 735736 2102710 ~ 2116883 (-)
smim29 si:dkey-226k3.4,LOC107690111,LOC107567962,LOC107724208,LOC107738791,LOC107678078,LOC107571229 other downstream 1340290 1507698 ~ 1512329 (-)
l3mbtl1 l3mbtl1,LOC107736954,LOC107564793,LOC107684891,LOC107675169 other downstream 1787845 1053377 ~ 1064774 (-)
si:zfos-905g2.1 si:zfos-905g2.1 other upstream 16388 2869618 ~ 2874758 (-)
G154446 NA other upstream 71818 2925048 ~ 2957272 (-)
G154445 NA other upstream 72075 2925305 ~ 2951628 (-)
LOC122328836 LOC107566068 other upstream 580894 3434124 ~ 3445964 (-)
tspan2b tspan2b,LOC107709234,LOC107696969,LOC107746340,LOC107566064,LOC107673514,LOC107554202 other upstream 649035 3502265 ~ 3518142 (-)

Expression


Co-expression Network