si:zfos-905g2.1 (si:zfos-905g2.1)


Basic Information

Item Value
gene id si:zfos-905g2.1
gene name si:zfos-905g2.1
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 2869618 ~ 2874758 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU228643
GTTTGTGTGCCAGGTTAACACAGTATTgacaaatattacatatatgctAGTAATGTAACCATTGCAAATAGCCAACAGAAATTTGCTGCCTTCAAATATCGGTCAGATGATGGAACATCAGGAGACAGGAAGTAAAGCCAACTTTGAGTGTGCTGCTTCCTACCTTGATAGGCGTCCTcagaaagttttgtttttttttagccctAAGCCCTGTCGATGATAGAAagtttttgcaaaatgtaaggattaaaagtaatttttaccATGCATAGGcgtcatataaaa
>XM_043224920.1
GTGTTTGTGTGCCAGGTTAACACAGTATTgacaaatattacatatatgctAGTAATGTAACCATTGCAAATAGCCAACAGAAATTTGCTGCCTTCAAATATCGGTCAGATGATGGAACATCAGGAGACAGGAAGTAAAGCCAACTTTGAGTGTGCTGCTTCCTACCTTGATAGGCGTCCTcagaaagttttgtttttttttagccctAAGCCCTGTCGATGATAGAAagtttttgcaaaatgtaaggattaaaagtaatttttaccATGCATAGGcgtcatataaaataataaaaatgtatcggAAATATTATCTCAAAATATTGTCATACCATAGCAACGATCAGAGATTAATAATTTGCCAATTTgtcatttgagaaaaaaaaaaatcacaaaacctATTGCAAAAAGCGAGAAAGTGTATTCTGTCTTGATCTCTGGCAAACACTGCTCCTGCTCTTTGACTGTGAATGAGCGGAAGGAGAAGTAGTTCCTGTCCTGCACAGCAATAGTTCAATTATTTCATTTCGACACTCGTGATGTGCagttatttcagttatttaaaaacagctgctgtttttctttttttttttaaagaaaccttTACAAATCGATGTCGTAAAAGTAGGATAGTTCCTCGTGAATGAACGAATGATTTGGAGCATCGCTATTTCAAGATCCATCCGCCCATCCCCGCTGAACTAACTccagcgacacacacacacacagtccgaTCCAGCTGCACTCTTCACGAGTGTGAGCGCGTTTCCCGCTTAAAAACAGCTCTCAAACTCACCGGAGAGGCTCAAACAACACCGTGCTCTGCCGAGGCCCCGACAGCCGCGCGCGAGCTGAATAAAGATGAAGGTTAAACTTCGCGCTGCCGCGGATTCGCGGCCTCAAAGTGTGTCCGACAGCGATGAGGAGGACACACACAGCCTCGGCGACGAGCAGTTTATCGTTGTCAAGCTTGAAGAGGAAGATCCAGAAACCGAGATGGACCTGAGCATATTCGCTCCTGTCGAGTCCTCGGAgtgtgaggaggatgaggaagaagatgaagatgatgaactTACAGACTCATCCAGCGTCTCCACCTGGAGAAGGAAAAACACCAGAGAGCGAGTGATCACTCCAGAAAACCATGAGGATCCAGCTCCCCTTGAGAAACAGTCCTTCACAAGGAGTTTAAAAGGACGGCGAAAGAGCCGAGAGACGTTTCTCTCTGAGCAAAGACTGGACTGTAGTGCAGCAAACAAGGAGGTGAATGTCGGACTCCCGTCTGAGAACCGCTCCGTTTACCAAGCTGCGCCTCTGTCTGATTCAGCCCGAGGTCCTGTACAGATGTCTGGACTAGACACGGCAATCAGCCCTGTAGCTGCCATGGAGCCTCCTGTATTCCCAAATGCACCAGTCCAGAGCGCTTCCGTCGTCGGGGAGGATCAGCAGAATGTACTGCTCGAGGTCCTGAACCATTGTAGGTTCCTGCATGCAGCAGTGCAGAGGCTCGAACAGAAGATTGACAGACAGATGTCAAACGAGCTGTTATACGAAAGAAGCTCAGCGAGCCAGAAGAACGCTCCAAAGAGGCGGGTGTCTCTGCGTGTTGAAGAAAGGCAGCTGTCCTGGTCTTTGGCTCAGAGACTTGGTCCACCGGTCCAGAGAAACACGCGCTGGATCCCTCCCTGGAAACGAGGGCTGGACAGGACGGATCTCCAGCGAGCAGAAGACTGCGTTCAGCCGGGTAACCCTCCCGGCGGCGGACGAGGccgaggaagaggaagaggacgCCGGGGGCGCCTTGCCGGGTCCCAGCGTCAGTCAGCCGGGGGCGCCCTTATGCATCCCAAGACTCTTGATCCTGCTCCTTCCACGCCAAAACCCGGTGGGGATGAGCTCTGCAACGCTCCCACAGATGACCCACAGCCGTCCCAGGTAGTGAAGAAAGCCTCAAAGCGTCAGCAGAAGAGAAAGCAAGCCTTGGCTCAGGTGGACAGGGAGAAAGTTGAAGTTGAGGCCACACTTCAGGCTCAGGCTGACAACAGAGTCATGATCGGAAGCCCCTTGAGGAAAGTGTGGATCCCGCAGTCTGTGTACAAGGAGGTGTTTAAGGAGGTGGAGCCCCAGAAGGCTGTGGGGCCTGTTCTTCACGCTCTCTTCCCCATCTCCACACTGTCCTGCAGTGCCATCACAGGAAACCCTGCCAAAGGCATCCAGCAACTCGACCCCAACAAAATAGAAGCCCTTCGAGAGTTTCTTGCTGAGATGTACCCACAGTTTGACATCGGCGTGAGGGCCGTGACGTGGGCACAGTGTTTAGGAGTGATTAACAACATCACCAAAGACCTCAAGAAACGAGCTGAAAAAACCTCACATCTGCCAACGGAGGTGGGCTACACAAGAAATGATTGTTCATACTCTTGAGGACACACTCAAACGTGCAACAACATAACCagttttattcactttaatCAGTGGATACAGCGTTCATAACTCTCTGTTCGGACAACAGATGTCTTTTTGTTCACTCTTCTGTAGTTAAGTTTCAACGGAGAGAGAGGTTTTAGATGTGTAATATATtaacttgtttttgtttctttttgttttcttaaaaaattcatatattaaccattttttttgtttaaacatctatatattactgtacattttttatatattgccaaataaagtcttttttcaga
>XM_043224921.1
TTGTGTGCCAGGTTAACACAGTATTgacaaatattacatatatgctAGTAATGTAACCATTGCAAATAGCCAACAGAAATTTGCTGCCTTCAAATATCGGTCAGATGATGGAACATCAGGAGACAGGAAGTAAAGCCAACTTTGAGTGTGCTGCTTCCTACCTTGATAGGCGTCCTcagaaagttttgtttttttttagccctAAGCCCTGTCGATGATAGAAagtttttgcaaaatgtaaggattaaaagtaatttttaccATGCATAGGcgtcatataaaataataaaaatgtatcggAAATATTATCTCAAAATATTGTCATACCATAGCAACGATCAGAGATTAATAATTTGCCAATTTgtcatttgagaaaaaaaaaaatcacaaaacctATTGCAAAAAGCGAGAAAGTGTATTCTGTCTTGATCTCTGGCAAACACTGCTCCTGCTCTTTGACTGTGAATGAGCGGAAGGAGAAGTAGTTCCTGTCCTGCACAGCAATAGTTCAATTATTTCATTTCGACACTCGTGATGTGCagttatttcagttatttaaaaacagctgctgtttttctttttttttttaaagaaaccttTACAAATCGATGTCGTAAAAGTAGGATAGTTCCTCGTGAATGAACGAATGATTTGGAGCATCGCTATTTCAAGATCCATCCGCCCATCCCCGCTGAACTAACTccagcgacacacacacacacagtccgaTCCAGCTGCACTCTTCACGAGTGTGAGCGCGTTTCCCGCTTAAAAACAGCTCTCAAACTCACCGGAGAGGCTCAAACAACACCGTGCTCTGCCGAGGCCCCGACAGCCGCGCGCGAGCTGAATAAAGATGAAGGTTAAACTTCGCGCTGCCGCGGATTCGCGGCCTCAAAGTGTGTCCGACAGCGATGAGGAGGACACACACAGCCTCGGCGACGAGCAGTTTATCGTTGTCAAGCTTGAAGAGGAAGATCCAGAAACCGAGATGGACCTGAGCATATTCGCTCCTGTCGAGTCCTCGGAgtgtgaggaggatgaggaagaagatgaagatgatgaactTACAGACTCATCCAGCGTCTCCACCTGGAGAAGGAAAAACACCAGAGAGCGAGTGATCACTCCAGAAAACCATGAGGATCCAGCTCCCCTTGAGAAACAGTCCTTCACAAGGAGTTTAAAAGGACGGCGAAAGAGCCGAGAGACGTTTCTCTCTGAGCAAAGACTGGACTGTAGTGCAGCAAACAAGGAGGTGAATGTCGGACTCCCGTCTGAGAACCGCTCCGTTTACCAAGCTGCGCCTCTGTCTGATTCAGCCCGAGGTCCTGTACAGATGTCTGGACTAGACACGGCAATCAGCCCTGTAGCTGCCATGGAGCCTCCTGTATTCCCAAATGCACCAGTCCAGAGCGCTTCCGTCGTCGGGGAGGATCAGCAGAATGTACTGCTCGAGGTCCTGAACCATTGTAGGTTCCTGCATGCAGCAGTGCAGAGGCTCGAACAGAAGATTGACAGACAGATGTCAAACGAGAGGCGGGTGTCTCTGCGTGTTGAAGAAAGGCAGCTGTCCTGGTCTTTGGCTCAGAGACTTGGTCCACCGGTCCAGAGAAACACGCGCTGGATCCCTCCCTGGAAACGAGGGCTGGACAGGACGGATCTCCAGCGAGCAGAAGACTGCGTTCAGCCGGGTAACCCTCCCGGCGGCGGACGAGGccgaggaagaggaagaggacgCCGGGGGCGCCTTGCCGGGTCCCAGCGTCAGTCAGCCGGGGGCGCCCTTATGCATCCCAAGACTCTTGATCCTGCTCCTTCCACGCCAAAACCCGGTGGGGATGAGCTCTGCAACGCTCCCACAGATGACCCACAGCCGTCCCAGGTAGTGAAGAAAGCCTCAAAGCGTCAGCAGAAGAGAAAGCAAGCCTTGGCTCAGGTGGACAGGGAGAAAGTTGAAGTTGAGGCCACACTTCAGGCTCAGGCTGACAACAGAGTCATGATCGGAAGCCCCTTGAGGAAAGTGTGGATCCCGCAGTCTGTGTACAAGGAGGTGTTTAAGGAGGTGGAGCCCCAGAAGGCTGTGGGGCCTGTTCTTCACGCTCTCTTCCCCATCTCCACACTGTCCTGCAGTGCCATCACAGGAAACCCTGCCAAAGGCATCCAGCAACTCGACCCCAACAAAATAGAAGCCCTTCGAGAGTTTCTTGCTGAGATGTACCCACAGTTTGACATCGGCGTGAGGGCCGTGACGTGGGCACAGTGTTTAGGAGTGATTAACAACATCACCAAAGACCTCAAGAAACGAGCTGAAAAAACCTCACATCTGCCAACGGAGGTGGGCTACACAAGAAATGATTGTTCATACTCTTGAGGACACACTCAAACGTGCAACAACATAACCagttttattcactttaatCAGTGGATACAGCGTTCATAACTCTCTGTTCGGACAACAGATGTCTTTTTGTTCACTCTTCTGTAGTTAAGTTTCAACGGAGAGAGAGGTTTTAGATGTGTAATATATtaacttgtttttgtttctttttgttttcttaaaaaattcatatattaaccattttttttgtttaaacatctatatattactgtacattttttatatattgccaaataaagtcttttttcaga

Function

symbol description
si:zfos-905g2.1 Orthologous to human BEND2 (BEN domain containing 2).

NR:

description
uncharacterized protein si:zfos-905g2.1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228643 False 285 lncRNA 0.37 1 2874472 2874756
XM_043224920.1 True 2701 mRNA 0.48 10 2869618 2874758
XM_043224921.1 False 2652 mRNA 0.47 9 2869618 2874754

Neighbor

gene id symbol gene type direction distance location
LOC122329166 LOC107571805,LOC107718002,LOC107687299,LOC107748429,LOC107565964,LOC107680061 coding downstream 110496 2730822 ~ 2759122 (-)
LOC122329165 LOC107571805,LOC107687299,LOC107565964,LOC107718002,LOC107748429,LOC107680061 coding downstream 140122 2726830 ~ 2729496 (-)
LOC122328868 LOC107565964,LOC107571805,LOC107718002,LOC107680061 coding downstream 142762 2723841 ~ 2726856 (-)
fbxo30b fbxo30b,LOC107718004,LOC107680062,LOC107571806,LOC107687300,LOC107565976,LOC107735267 coding downstream 149589 2714497 ~ 2720029 (-)
epm2a epm2a,LOC107718005 coding downstream 155313 2701815 ~ 2714305 (-)
frmd4bb frmd4bb,LOC107558919,LOC107687288,LOC107709245,LOC107704625,LOC107748434 coding upstream 139858 3014616 ~ 3062072 (-)
LOC122328867 LOC107558923,LOC107687304,LOC107709232,LOC107748446 coding upstream 220305 3095063 ~ 3099888 (-)
LOC122328874 LOC107704620,LOC107748451 coding upstream 227310 3102068 ~ 3106940 (-)
tmem106c tmem106c,LOC107697039,LOC107704621,LOC107558924 coding upstream 232249 3107007 ~ 3113429 (-)
LOC122328875 LOC107709230,LOC107558910,LOC107696973,LOC107704617,LOC107554205,LOC107748447 coding upstream 239934 3114692 ~ 3120743 (-)
G154412 NA non-coding downstream 667 2867471 ~ 2868951 (-)
G154406 NA non-coding downstream 9436 2856588 ~ 2860182 (-)
G154407 NA non-coding downstream 16388 2852619 ~ 2853230 (-)
G154405 NA non-coding downstream 18094 2851314 ~ 2851524 (-)
G154404 NA non-coding downstream 21999 2847358 ~ 2847619 (-)
G154420 NA non-coding upstream 25813 2900571 ~ 2900823 (-)
G154442 NA non-coding upstream 49284 2924042 ~ 2938624 (-)
G154444 NA non-coding upstream 50252 2925010 ~ 2932237 (-)
G154443 NA non-coding upstream 50446 2925204 ~ 2950658 (-)
G154520 LOC107709225,LOC107565972 non-coding upstream 122007 2996765 ~ 2997964 (-)
LOC122328838 LOC107680059,LOC107748448,LOC107565963 other downstream 30571 2769482 ~ 2839047 (-)
LOC122328849 LOC107718007,LOC107687303,LOC107571802,LOC107748430,LOC107680054,LOC107565975 other downstream 71085 2787296 ~ 2798533 (-)
LOC122328833 LOC107669693 other downstream 752735 2102710 ~ 2116883 (-)
smim29 si:dkey-226k3.4,LOC107690111,LOC107567962,LOC107724208,LOC107738791,LOC107678078,LOC107571229 other downstream 1357289 1507698 ~ 1512329 (-)
l3mbtl1 l3mbtl1,LOC107736954,LOC107564793,LOC107684891,LOC107675169 other downstream 1804844 1053377 ~ 1064774 (-)
G154446 NA other upstream 50290 2925048 ~ 2957272 (-)
G154445 NA other upstream 50547 2925305 ~ 2951628 (-)
LOC122328836 LOC107566068 other upstream 559366 3434124 ~ 3445964 (-)
tspan2b tspan2b,LOC107709234,LOC107696969,LOC107746340,LOC107566064,LOC107673514,LOC107554202 other upstream 627507 3502265 ~ 3518142 (-)
lad1 LOC107746516,LOC107696941,LOC107559160 other upstream 1020208 3894966 ~ 3905892 (-)

Expression


Co-expression Network