G154425


Basic Information

Item Value
gene id G154425
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 2947774 ~ 2957135 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU228686
CCAGGGTCAAGGTGGCGGCCAGGGAAGGGGCCAGGGTCAAGGTGGAGGACAGGGACAGGGTGGCAGCCGGGGAGGTAAATAAGTCTTATTGTTCTGAGGTTAGGGAAGTTGTGAAATTTGGTCCAGCTAGTGATTCTGggcatttttttgcaatgcactGGAGAGCTCTTCATGTGGAAATCTATTCCCACTTCCTCATTCTGTAAACCCACCCCTTCAGTCAAATAAAGATGATtgcttgattttgttttgtattgggGTTATTTTTCTTTGTCCTACTGTCACGAaggaacggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228686 True 296 lncRNA 0.47 2 2947774 2957135

Neighbor

gene id symbol gene type direction distance location
LOC122329167 NA coding upstream 9056 2923380 ~ 2938718 (+)
LOC122328848 LOC107709248,LOC107687290,LOC107558915 coding upstream 30226 2901814 ~ 2917548 (+)
cdh26.1 LOC107687291,LOC107709249,LOC107748449,LOC107565965,LOC107558905 coding upstream 47984 2885732 ~ 2899790 (+)
zgc:113423 LOC107687294,LOC107558912,LOC107717998 coding upstream 77894 2863843 ~ 2869880 (+)
tgm1 LOC107718009,LOC107558911,LOC107687295 coding upstream 113179 2826308 ~ 2834595 (+)
LOC122328851 LOC107687290,LOC107709248,LOC107558915 coding downstream 8465 2965600 ~ 2976846 (+)
LOC122328866 LOC107709226,LOC107576631 coding downstream 26203 2983338 ~ 2989016 (+)
rhoac rhoac,LOC107687289,LOC107558917,LOC105890655,LOC108438067,LOC102777028,LOC106572042 coding downstream 32380 2989515 ~ 2993355 (+)
twist3 twist3,LOC107696972,LOC107748453,LOC107554215,LOC107576512,LOC107704622,LOC107709223 coding downstream 176396 3133531 ~ 3137978 (+)
LOC122328845 LOC107554212,LOC107697038,LOC107571185,LOC107673381,LOC100001805,LOC107752455 coding downstream 362306 3319441 ~ 3352334 (+)
LOC122328888 NA non-coding upstream 8693 2938721 ~ 2939081 (+)
G154369 NA non-coding upstream 96326 2851024 ~ 2851448 (+)
G154368 NA non-coding upstream 102619 2844852 ~ 2845155 (+)
LOC122328886 LOC107748448,LOC107680059,LOC107565963 non-coding upstream 104752 2835863 ~ 2843022 (+)
G154365 NA non-coding upstream 149937 2797127 ~ 2797837 (+)
LOC122328882 NA non-coding downstream 54046 3011181 ~ 3021971 (+)
LOC122328883 NA non-coding downstream 92263 3049398 ~ 3051276 (+)
G154487 tmem106c,LOC107704621 non-coding downstream 155387 3112522 ~ 3113171 (+)
G154517 NA non-coding downstream 249347 3206482 ~ 3206688 (+)
G154561 NA non-coding downstream 285080 3242215 ~ 3242722 (+)
LOC122329169 NA other upstream 3968 2925308 ~ 2943806 (+)
prdm5 prdm5,LOC107698519,LOC107669703 other upstream 591047 2312722 ~ 2356727 (+)
LOC122328869 LOC107723021,LOC107694620,LOC107577481 other upstream 814941 2129998 ~ 2132833 (+)
LOC122328880 LOC107723010,LOC107683284,LOC107694619 other upstream 876375 2068668 ~ 2071399 (+)
snai1b LOC107694621,LOC107723015,LOC107549169,LOC107558792,LOC107738552,LOC107669687 other upstream 893799 2050032 ~ 2053975 (+)
rbm10 LOC107709225,LOC107687301,LOC107704624,LOC107748436 other downstream 38034 2995169 ~ 3010017 (+)
mitfb LOC107704626,LOC107709243,LOC107748437,LOC108438070,LOC107687304,LOC107558923,LOC107709232 other downstream 103374 3060509 ~ 3097035 (+)
ube2t ube2t,LOC107746510,LOC107707375,LOC107673550 other downstream 737517 3694652 ~ 3697022 (+)
LOC122328459 g6pd,LOC107723128,LOC107697003,LOC107594489 other downstream 1860230 4817365 ~ 4835484 (+)
si:ch211-220i18.4 LOC107551506,LOC107666586,LOC107559855,LOC107681367,LOC107705652,LOC108275527,LOC107100285 other downstream 3635467 6592602 ~ 6598532 (+)

Expression


Co-expression Network