G154442


Basic Information

Item Value
gene id G154442
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 2924042 ~ 2938624 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU228714
GTCCCTGTCCGTCACCTTGGTCTCCCCCACGTCCCCAACCACCACCACCCTGTCCGTCACCTTGGTCTCCCCCACGTCCCTGGCCAAATGCTTTACTGCATGAACGGCCACAGGTGGTTGGGCAACACTTCTGTCTGGCAGGACACTGACCATCATGGAAACAGCGTTCATCACACACTCGACTCCTCGTTGGTCTGGGACATTGACCCGGTTTCACTGCATGGAAACAGATAGTCTGCTTTAGTCTGTGTATATGGTCTTCAATGAACAGCAATTATACCTACAGAGCGAATTGGGGTGCATTCACACTGGTCTTGTTTGGTTTGATTTGAAAAACTAAAGTACCTTCGCCCCCTTTGGTGTGGACCTTTTGGGCAGGTGTAAATACAGCAGTCACACTCTGGTGCGCAAAAACAATTGAACAGAGACCCAGCTGAAGAGGTTTGGTTCCAAACAATCTCTGGCACAGTATTCACAAGGTGTGAGTATAATCTGACCCAACTGCAGAAAGCACTGTCGGCGTTAACAGGTTCCCGTAGTTTGAGTTTGCTACATTTGCCATACAAAATTAGATGTATGAAAGCTTGTAAATCGGGTCTAGACCAATGCAGGTGAACTAGCGGATTTTCTGGTGTGAATACACCCTTATATTCAAAGTCTTTTTCACCTTACATTTTGTAAAGCCACCCCAGGTTTAAAATGGTGTTAAGTgatgaatttaaaaaactaaatctataAGTGGAACACCTATATATGGATCTGTACAGTGATGTCCACATCCATTGCTGCAGCACTTCTCGTTGCCTGGACAGCAAGAGTCACTTCCACAAGAACTGGTACATGATTTTCTTCCACACATTTTGGCAGGTGGACACTCTCCTGGTTTTG
>TU228716
GTCCCTGTCCGTCACCTTGGTCTCCCCCACGTCCCCAACCACCACCACCCTGTCCGTCACCTTGGTCTCCCCCACGTCCCTGGCCAAATGCTTTACTGCATGAACGGCCACAGGTGGTTGGGCAACACTTCTGTCTGGCAGGACACTGACCATCATGGAAACAGCGTTCATCACACACTCGACTCCTCGTTGGTCTGGGACATTGACCCGGTTTCACTGCATGGAAACAGATAGTCTGCTTTAGTCTGTGTATATGGTCTTCAATGAACAGCAATTATACCTACAGAGCGAATTGGGGTGCATTCACACTGGTCTTGTTTGGTTTGATTTGAAAAACTAAAGTACCTTCGCCCCCTTTGGTGTGGACCTTTTGGGCAGGTGTAAATACAGCAGTCACACTCTGGTGCGCAAAAACAATTGAACAGAGACCCAGCTGAAGAGGTTTGGTTCCAAACAATCTCTGGCACAGTATTCACAAGGTGTGAGTATAATCTGACCCAACTGCAGAAAGCACTGTCGGCGTTAACAGGTTCCCGTAGTTTGAGTTTGCTACATTTGCCATACAAAATTAGATGTATGAAAGCTTGTAAATCGGGTCTAGACCAATGCAGGTGAACTAGCGGATTTTCTGGTGTGAATACACCCTTATATTCAAAGTCTTTTTCACCTTACATTTTGTAAAGCCACCCCAGGTTTAAAATGGTGTTAAGTgatgaatttaaaaaactaaatctataAGTGGAACACCTATATATGGATCTGTACAGTGATGTCCACATCCATTGCTGCAGCACTTCTCGTTGCCTGGACAGCAAGAGTCACTTCCACAAGAACTGGTACATGATTTTCTTCCACACATTTTGGCAGGTGGACACTCTCCTGGTTTTG
>TU228718
GTCCCTGTCCGTCACCTTGGTCTCCCCCACGTCCCCAACCACCACCACCCTGTCCGTCACCTTGGTCTCCCCCACGTCCCTGGCCAAATGCTTTACTGCATGAACGGCCACAGGTGGTTGGGCAACACTTCTGTCTGGCAGGACACTGACCATCATGGAAACAGCGTTCATCACACACTCGACTCCTCGTTGGTCTGGGACATTGACCCGGTTTCACTGCATGGAAACAGATAGTCTGCTTTAGTCTGTGTATATGGTCTTCAATGAACAGCAATTATACCTACAGAGCGAATTGGGGTGCATTCACACTGGTCTTGTTTGGTTTGATTTGAAAAACTAAAGTACCTTCGCCCCCTTTGGTGTGGACCTTTTGGGCAGGTGTAAATACAGCAGTCACACTCTGGTGCGCAAAAACAATTGAACAGAGACCCAGCTGAAGAGGTTTGGTTCCAAACAATCTCTGGCACAGTATTCACAAGGTGTGAGTATAATCTGACCCAACTGCAGAAAGCACTGTCGGCGTTAACAGGTTCCCGTAGTTTGAGTTTGCTACATTTGCCATACAAAATTAGATGTATGAAAGCTTGTAAATCGGGTCTAGACCAATGCAGGTGAACTAGCGGATTTTCTGGTGTGAATACACCCTTATATTCAAAGTCTTTTTCACCTTACATTTTGTAAAGCCACCCCAGGTTTAAAATGGTGTTAAGTgatgaatttaaaaaactaaatctataAGTGGAACACCTATATATGGATCTGTACAGTGATGTCCACATCCATTGCTGCAGCACTTCTCGTTGCCTGGACAGCAAGAGTCACTTCCACAAGAACTGGTACATGATTTTCTTCCACACATTTTGGCAGGTGGACACTCTCCTGGTTTTG
>TU228719
GTCCCTGTCCGTCACCTTGGTCTCCCCCACGTCCCCAACCACCACCACCCTGTCCGTCACCTTGGTCTCCCCCACGTCCCTGGCCAAATGCTTTACTGCATGAACGGCCACAGGTGGTTGGGCAACACTTCTGTCTGGCAGGACACTGACCATCATGGAAACAGCGTTCATCACACACTCGACTCCTCGTTGGTCTGGGACATTGACCCGGTTTCACTGCATAGAAACAGATAGTCTGCTTTAGTCTGTGTATATGGTCTTCAATGAACAGCAATTATACCTACAGAGCGAATTGGGGTGCATTCACACTGGTCTTGTTTGGTTTGATTTGAAAAACTAAAGTACCTTTGCCCCCTTTGGTGTGGACCTTTTGGGCAAATACAGCATTTGTAAATACAGCAGTCACACTCTGGTGCGCAAAAACAATTGAACAGAGACCCAGCTGAAGAGGTTTGGTTCCAAACAATCTCTGGCACAGTATTCACAAGGTGTGAGTATAATCTGACCCAACTGCAGAAAGCACTGTGTCTGAGTTAACAGGTTCCCGTAGTTTGAGTTTGCTACATTTGCCATACAAAATTAGATGTATGAAAGCTTGTAAATCTGGTCTAGACCAATGCAGGTGAACTAGCGGATTTTCTGGTGTGAATACACCCTTATATTCAAagtcttatttacattttgtaaagccACCCCAGGTTTAAAATGGTGTTAAGtgatgaatttaaaaaacaaaatctataaGTGGAACACCTATATATGGATCTGTACAGTGATGTCCACATCCATTGCTGCAGCACTTCTCGTTGCCTGGACAGCAAGAGTCACTTCCACAAGAACTGGTACATGATTTTCTTCCACACATTTTGGCAGGTGGACACTCTCCTGGTTTTG

Function

GO:

id name namespace
GO:0000003 reproduction biological_process
GO:0022412 cellular process involved in reproduction in multicellular organism biological_process
GO:0022414 reproductive process biological_process
GO:0051704 multi-organism process biological_process
GO:0003006 developmental process involved in reproduction biological_process
GO:0046332 SMAD binding molecular_function
GO:0070412 R-SMAD binding molecular_function

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
TU228714 False 888 lncRNA 0.46 2 2930783 2938624
TU228716 False 888 lncRNA 0.46 2 2930783 2938624
TU228718 False 888 lncRNA 0.46 2 2930783 2938624
TU228719 True 894 lncRNA 0.45 3 2924042 2938624

Neighbor

gene id symbol gene type direction distance location
LOC122329166 LOC107571805,LOC107718002,LOC107687299,LOC107748429,LOC107565964,LOC107680061 coding downstream 164920 2730822 ~ 2759122 (-)
LOC122329165 LOC107571805,LOC107687299,LOC107565964,LOC107718002,LOC107748429,LOC107680061 coding downstream 194546 2726830 ~ 2729496 (-)
LOC122328868 LOC107565964,LOC107571805,LOC107718002,LOC107680061 coding downstream 197186 2723841 ~ 2726856 (-)
fbxo30b fbxo30b,LOC107718004,LOC107680062,LOC107571806,LOC107687300,LOC107565976,LOC107735267 coding downstream 204013 2714497 ~ 2720029 (-)
epm2a epm2a,LOC107718005 coding downstream 209737 2701815 ~ 2714305 (-)
frmd4bb frmd4bb,LOC107558919,LOC107687288,LOC107709245,LOC107704625,LOC107748434 coding upstream 75992 3014616 ~ 3062072 (-)
LOC122328867 LOC107558923,LOC107687304,LOC107709232,LOC107748446 coding upstream 156439 3095063 ~ 3099888 (-)
LOC122328874 LOC107704620,LOC107748451 coding upstream 163444 3102068 ~ 3106940 (-)
tmem106c tmem106c,LOC107697039,LOC107704621,LOC107558924 coding upstream 168383 3107007 ~ 3113429 (-)
LOC122328875 LOC107709230,LOC107558910,LOC107696973,LOC107704617,LOC107554205,LOC107748447 coding upstream 176068 3114692 ~ 3120743 (-)
G154420 NA non-coding downstream 23219 2900571 ~ 2900823 (-)
G154412 NA non-coding downstream 55091 2867471 ~ 2868951 (-)
G154406 NA non-coding downstream 63860 2856588 ~ 2860182 (-)
G154407 NA non-coding downstream 70812 2852619 ~ 2853230 (-)
G154405 NA non-coding downstream 72518 2851314 ~ 2851524 (-)
G154520 LOC107709225,LOC107565972 non-coding upstream 58141 2996765 ~ 2997964 (-)
G154519 NA non-coding upstream 67859 3006483 ~ 3009478 (-)
G154525 NA non-coding upstream 72795 3011419 ~ 3013181 (-)
G154663 NA non-coding upstream 693735 3632359 ~ 3633333 (-)
G154671 NA non-coding upstream 716662 3655286 ~ 3655596 (-)
si:zfos-905g2.1 si:zfos-905g2.1 other downstream 49284 2869618 ~ 2874758 (-)
LOC122328838 LOC107680059,LOC107748448,LOC107565963 other downstream 84995 2769482 ~ 2839047 (-)
LOC122328849 LOC107718007,LOC107687303,LOC107571802,LOC107748430,LOC107680054,LOC107565975 other downstream 125509 2787296 ~ 2798533 (-)
LOC122328833 LOC107669693 other downstream 807159 2102710 ~ 2116883 (-)
smim29 si:dkey-226k3.4,LOC107690111,LOC107567962,LOC107724208,LOC107738791,LOC107678078,LOC107571229 other downstream 1411713 1507698 ~ 1512329 (-)
LOC122328836 LOC107566068 other upstream 495500 3434124 ~ 3445964 (-)
tspan2b tspan2b,LOC107709234,LOC107696969,LOC107746340,LOC107566064,LOC107673514,LOC107554202 other upstream 563641 3502265 ~ 3518142 (-)
lad1 LOC107746516,LOC107696941,LOC107559160 other upstream 956342 3894966 ~ 3905892 (-)
LOC122329268 LOC107707377,LOC107673205,LOC107746501,LOC107697018,LOC107601321,LOC107598138,LOC108443130,LOC103026736,LOC106572423 other upstream 1235290 4173914 ~ 4194998 (-)
LOC122329181 LOC107601337,LOC107697001,LOC107723119 other upstream 1888854 4827478 ~ 4834520 (-)

Expression


Co-expression Network