G154445


Basic Information

Item Value
gene id G154445
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 2925305 ~ 2951628 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU228725
tcaagcaATCATCTTTATTTGAATGAAGGGGTGGGTTTACAGAATGGAGGAAATGGGAATAGATTTCCACATGAAAAGATCTCCAGTGCATTGCAAAAAATGCCCAGAATCACTAGCTGGACCAAATACCTGGACACATTTCACAACTTCCCTAACCTCAGAACAATAAAAGACTTATTTACCTCCCCGGCTGCCACCCTGTCCACCCCCCTGGCCCTGGCTGCCAccctggcctccttggccctggcctccttggccctggcctccttggccctggcctccttggccctggccCTGACCCCCTTGGCCCTGACCCTGACCCCCTTGGCCCTGACCCTGACCCCCTTGGCCCTGgcctccttggccctggcctccttggccctggcctCCTGGCCCTGGCCGCCTTGGCCTGGCCGcctggcctccttggccctggccgCC
>TU228726
tcaagcaATCATCTTTATTTGAATGAAGGGGTGGGTTTACAGAATGGAGGAAATGGGAATAGATTTCCACATGAAAAGATCTCCAGTGCATTGCAAAAAATGCCCAGAATCACTAGCTGGACCAAATACCTGGACACATTTCACAACTTCCCTAACCTCAGAACAATAAAAGACTTATTTACCTCCCCGGCTGCCACCCTGTCCACCCCCCTGGCCCTGGCctccttggccctggcctccttggccctggcctccttggccctggcctccttggccctggccgCCTTGGCCCTGGCCGCCTTGGCCCTGGCCGCCTTGGCCCTGGCCGCCCTGGCCCTGGCCGCCCTGGCCCTGGCCGCCCtggcctccttggccctggccgCC
>TU228727
ctggcctccttggccctggccctggcctccttggccctggccctggcctccttggccctggccCTGGCCGCCTTGGTcctggcctccttggccctggccgccctggcctccttggccctggccgccttcgccctggcctccttggccctggcctCCCTGGCCCTGGCCTCCCTGgccctggcctccttggccctggcctccttggccctggcctccttggccctggccgCCCTGGCCGCCCTGGCCGCCCTGGCCgccctggcctccttggccctggccgccctggcctccttggccctggcctccttggccctggccgCCCTGGCCCTGGCCGCCCTGGCCCTGGCCGCCCTGGCCCTGGCCGCCCtggcctccttggccctggccgCC
>TU228728
tcaagcaATCATCTTTATTTGAATGAAGGGGTGGGTTTACAGAATGGAGGAAATGGGAATAGATTTCCACATGAAAAGATCTCCAGTGCATTGCAAAAAATGCCCAGAATCACTAGCTGGACCAAATACCTGGACACATTTCACAACTTCCCTAACCTCAGAACAATAAAAGACTTATTTACCTCCCCGGCTGCCACCCTGTCCACCCCCCTGGCCCTGGCTGCCAccctggcctccttggccctggcctccttggccctggcctccttggccctggcctccttggccctggccCTGACCCCCTTGGCCCTGACCCTGACCCCCTTGGCCCTGgccctggcctccttggccctggccctggcctcct
>TU228729
aagcaatCATCTTTATTTGAATGAAGGGGTGGGTTTACAGAATGGAGGAAATGGGAATAGATTTCCACATGAAAAGATCTCCAGTGCATTGCAAAAAATGCCCAGAATCACAAGCTGGACCAAATACCTGGACACATTTCACAACTTCCCTAACCTCAGAACAATAAAAGACTTATTTACCTCCCCGGCTGCCACCCTGTCCACCCCCCTGGCCCTGGCctccttggccctggcctccttggccctggcctCCTGGCCCTGGCCGCCTTGGCCTGGCCGcctggcctccttggccctggccgCC
>TU228730
tcaagCAATCATCTTTATTTGAATGAAGGGGTGGGTTTACAGAATGAGGAAATGGGAATAGATTTCCACATGAAAAGATCTCCAGTGCATTGCAAAAAATGCCCAGAATCACAAGCTGGACCAAATACCTGGACACATTTCACAACTTCCCTAACCTCAGAACAATAAAAGACTTATTTACCTCCCGGCTGCCACCCTGTCCACCCCCCTGGCCCTGGCctccttggccctggcctccttggccctggcctccttggccctggcctccttggccctggccgCCTTGGCCCTGGCCGCCTTGGCCCTGGCCGCCTTGGCCCTGGCCGCCCTGGCCCTGGCCGCCCTGGCCCTGGCCGCCCtggcctccttggccctggccgCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228725 True 441 TUCP 0.60 2 2925529 2951628
TU228726 False 384 TUCP 0.60 4 2925529 2942569
TU228727 False 390 lncRNA 0.79 3 2925305 2951088
TU228728 False 367 TUCP 0.57 2 2942238 2951628
TU228729 False 304 lncRNA 0.55 2 2925529 2925859
TU228730 False 382 lncRNA 0.60 4 2925305 2932816

Neighbor

gene id symbol gene type direction distance location
LOC122329166 LOC107571805,LOC107718002,LOC107687299,LOC107748429,LOC107565964,LOC107680061 coding downstream 166183 2730822 ~ 2759122 (-)
LOC122329165 LOC107571805,LOC107687299,LOC107565964,LOC107718002,LOC107748429,LOC107680061 coding downstream 195809 2726830 ~ 2729496 (-)
LOC122328868 LOC107565964,LOC107571805,LOC107718002,LOC107680061 coding downstream 198449 2723841 ~ 2726856 (-)
fbxo30b fbxo30b,LOC107718004,LOC107680062,LOC107571806,LOC107687300,LOC107565976,LOC107735267 coding downstream 205276 2714497 ~ 2720029 (-)
epm2a epm2a,LOC107718005 coding downstream 211000 2701815 ~ 2714305 (-)
frmd4bb frmd4bb,LOC107558919,LOC107687288,LOC107709245,LOC107704625,LOC107748434 coding upstream 62988 3014616 ~ 3062072 (-)
LOC122328867 LOC107558923,LOC107687304,LOC107709232,LOC107748446 coding upstream 143435 3095063 ~ 3099888 (-)
LOC122328874 LOC107704620,LOC107748451 coding upstream 150440 3102068 ~ 3106940 (-)
tmem106c tmem106c,LOC107697039,LOC107704621,LOC107558924 coding upstream 155379 3107007 ~ 3113429 (-)
LOC122328875 LOC107709230,LOC107558910,LOC107696973,LOC107704617,LOC107554205,LOC107748447 coding upstream 163064 3114692 ~ 3120743 (-)
G154420 NA non-coding downstream 24482 2900571 ~ 2900823 (-)
G154412 NA non-coding downstream 56354 2867471 ~ 2868951 (-)
G154406 NA non-coding downstream 65123 2856588 ~ 2860182 (-)
G154407 NA non-coding downstream 72075 2852619 ~ 2853230 (-)
G154405 NA non-coding downstream 73781 2851314 ~ 2851524 (-)
G154520 LOC107709225,LOC107565972 non-coding upstream 45137 2996765 ~ 2997964 (-)
G154519 NA non-coding upstream 54855 3006483 ~ 3009478 (-)
G154525 NA non-coding upstream 59791 3011419 ~ 3013181 (-)
G154663 NA non-coding upstream 680731 3632359 ~ 3633333 (-)
G154671 NA non-coding upstream 703658 3655286 ~ 3655596 (-)
si:zfos-905g2.1 si:zfos-905g2.1 other downstream 50547 2869618 ~ 2874758 (-)
LOC122328838 LOC107680059,LOC107748448,LOC107565963 other downstream 86258 2769482 ~ 2839047 (-)
LOC122328849 LOC107718007,LOC107687303,LOC107571802,LOC107748430,LOC107680054,LOC107565975 other downstream 126772 2787296 ~ 2798533 (-)
LOC122328833 LOC107669693 other downstream 808422 2102710 ~ 2116883 (-)
smim29 si:dkey-226k3.4,LOC107690111,LOC107567962,LOC107724208,LOC107738791,LOC107678078,LOC107571229 other downstream 1412976 1507698 ~ 1512329 (-)
LOC122328836 LOC107566068 other upstream 482496 3434124 ~ 3445964 (-)
tspan2b tspan2b,LOC107709234,LOC107696969,LOC107746340,LOC107566064,LOC107673514,LOC107554202 other upstream 550637 3502265 ~ 3518142 (-)
lad1 LOC107746516,LOC107696941,LOC107559160 other upstream 943338 3894966 ~ 3905892 (-)
LOC122329268 LOC107707377,LOC107673205,LOC107746501,LOC107697018,LOC107601321,LOC107598138,LOC108443130,LOC103026736,LOC106572423 other upstream 1222286 4173914 ~ 4194998 (-)
LOC122329181 LOC107601337,LOC107697001,LOC107723119 other upstream 1875850 4827478 ~ 4834520 (-)

Expression


Co-expression Network