G154520 (LOC107709225,LOC107565972)


Basic Information

Item Value
gene id G154520
gene name LOC107709225,LOC107565972
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 2996765 ~ 2997964 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU228840
aactcatcgaCATCTTGGATTGCCTGAGGACGAGCACACATTCagccaatttttatttttttttggctgacCTACTCCTTTAAATTCTGTATTTAATTCCTTAAATGTAGCATGATATGATATGCATCCAAACTATTACGCCAACTGCCACGCAGATTTCTATTGCCAAGTAAATGAAATTCGATTTTTGTTTCGTTATAACAGCATGCCACAGACGAACCGTCTGCATTCATAAATCAAGAAATAACATGAAGACAAACCTCGTTAACGGTTGCATTTGGCGGGAGCATTCTCAGCATGACAATGTTGCTGGGTTTTTGGACCTGCTCCGTATCAGACCTGTAGTCCTGGTCGCGGGGTTCGGCCTCCTCCTGGCACATTTCCAGAGCGGGATGAAACCTTCCGTCTCTTATTTTGTCCCTAGCTAGTTGAGATTCATCGGGAAACCTTGTTTGTGCGCGTGTCTGACGTGTTTGTCTTCCTCAGCTCTCCATTCTGCACCGTATTCGCCCTGAGAGTCGTGCCGCCCTCTAACTCTGCCCCAGGCGTCGTCCTCGTTTTCTTCACCTTCATCCGGGGTCCCTTCATCCAGATAGACCTTCTGTCCTGATCTATACGTCCTGTGCGCACTCGTCTCTGGCTCAAACTCATAATCCTTATCGTCTTGCTGGAATCCCGAGTGGATATTCTCATTGGGGGGACTTTGGAGGAGGCTTTTTCCAAGTGGGCCGTTTTCGGATCCGTGGTTTCCCTTTTGTCTGAATCCGGGTCGGTTAGTCGAAAAGTTACCCGAGGCAAAGTCTCTCATGCCTTCAAAACTACTATCGGGCTCTTGCGGTCTTACGTTTGTTAAACTGCTATTCGGTCTATTTTCTTGCCCGTAACCGCGATAGTCCATGTCCCTATAGTCATGATCGTCAGAATCTTTCCTATAGCGGCCCATCCGATCTCCACGACCGCCCCTACAAAAGACACAGACAATTAATAAACGGTTCGCTCAATTCACTGA

Function

NR:

description
PREDICTED: RNA-binding protein 10-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228840 True 1009 lncRNA 0.47 2 2996765 2997964

Neighbor

gene id symbol gene type direction distance location
LOC122329166 LOC107571805,LOC107718002,LOC107687299,LOC107748429,LOC107565964,LOC107680061 coding downstream 237643 2730822 ~ 2759122 (-)
LOC122329165 LOC107571805,LOC107687299,LOC107565964,LOC107718002,LOC107748429,LOC107680061 coding downstream 267269 2726830 ~ 2729496 (-)
LOC122328868 LOC107565964,LOC107571805,LOC107718002,LOC107680061 coding downstream 269909 2723841 ~ 2726856 (-)
fbxo30b fbxo30b,LOC107718004,LOC107680062,LOC107571806,LOC107687300,LOC107565976,LOC107735267 coding downstream 276736 2714497 ~ 2720029 (-)
epm2a epm2a,LOC107718005 coding downstream 282460 2701815 ~ 2714305 (-)
frmd4bb frmd4bb,LOC107558919,LOC107687288,LOC107709245,LOC107704625,LOC107748434 coding upstream 16652 3014616 ~ 3062072 (-)
LOC122328867 LOC107558923,LOC107687304,LOC107709232,LOC107748446 coding upstream 97099 3095063 ~ 3099888 (-)
LOC122328874 LOC107704620,LOC107748451 coding upstream 104104 3102068 ~ 3106940 (-)
tmem106c tmem106c,LOC107697039,LOC107704621,LOC107558924 coding upstream 109043 3107007 ~ 3113429 (-)
LOC122328875 LOC107709230,LOC107558910,LOC107696973,LOC107704617,LOC107554205,LOC107748447 coding upstream 116728 3114692 ~ 3120743 (-)
G154443 NA non-coding downstream 46107 2925204 ~ 2950658 (-)
G154442 NA non-coding downstream 58141 2924042 ~ 2938624 (-)
G154444 NA non-coding downstream 64528 2925010 ~ 2932237 (-)
G154420 NA non-coding downstream 95942 2900571 ~ 2900823 (-)
G154412 NA non-coding downstream 127814 2867471 ~ 2868951 (-)
G154519 NA non-coding upstream 8519 3006483 ~ 3009478 (-)
G154525 NA non-coding upstream 13455 3011419 ~ 3013181 (-)
G154663 NA non-coding upstream 634395 3632359 ~ 3633333 (-)
G154671 NA non-coding upstream 657322 3655286 ~ 3655596 (-)
G154672 NA non-coding upstream 658324 3656288 ~ 3656543 (-)
G154446 NA other downstream 39493 2925048 ~ 2957272 (-)
G154445 NA other downstream 45137 2925305 ~ 2951628 (-)
si:zfos-905g2.1 si:zfos-905g2.1 other downstream 122007 2869618 ~ 2874758 (-)
LOC122328838 LOC107680059,LOC107748448,LOC107565963 other downstream 157718 2769482 ~ 2839047 (-)
LOC122328849 LOC107718007,LOC107687303,LOC107571802,LOC107748430,LOC107680054,LOC107565975 other downstream 198232 2787296 ~ 2798533 (-)
LOC122328836 LOC107566068 other upstream 436160 3434124 ~ 3445964 (-)
tspan2b tspan2b,LOC107709234,LOC107696969,LOC107746340,LOC107566064,LOC107673514,LOC107554202 other upstream 504301 3502265 ~ 3518142 (-)
lad1 LOC107746516,LOC107696941,LOC107559160 other upstream 897002 3894966 ~ 3905892 (-)
LOC122329268 LOC107707377,LOC107673205,LOC107746501,LOC107697018,LOC107601321,LOC107598138,LOC108443130,LOC103026736,LOC106572423 other upstream 1175950 4173914 ~ 4194998 (-)
LOC122329181 LOC107601337,LOC107697001,LOC107723119 other upstream 1829514 4827478 ~ 4834520 (-)

Expression


Co-expression Network