LOC122329181 (LOC107601337,LOC107697001,LOC107723119)


Basic Information

Item Value
gene id LOC122329181
gene name LOC107601337,LOC107697001,LOC107723119
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 4827478 ~ 4834520 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU229703
GTGAAAGTTTGTTTTGGGCAGGTGTTACCATCCTGTCCAGAAAAGGGTTCTGATAGCCCAAATATGTGAGCCCGAAGAAAGCCATAATCTAAACCGTATTACGAGAACTAGCAAAACAACAGATAGCAGAAGCAACGAGCGGAGTCTAACGCGACATTCACGCGCTCTCCTCAAACGCTGTTTAACGTGTTTCCATGGATACTTACACTGCCACCCCCAGCTCCAGTTTAGTCACAAATATTTCGCTTGCTTCCTAAATACCAGCTCAGTCCATTTACTAATCTGCTGTTCCTTAGATTACGACTTGTTTGTAGAGGAAATAACCCGAGGGTTAAATTATCCAATGAGATGCACCTGGCATGCTGCTTTAAGAAAATGTAACGCGAGccattttctgaatattttctgtGGCGTGTAAGTTTACAACTGAAAGGTGGTTACAAGGCGTCGCTTTAGTGTAGgATGAGCTTACAAAGTCCTCAATGTACACTACCCATAAAACTGAGCATCTTGGGACTGACCTTTTTAATCACTATTTTATGGGTATTACTGCTGGATCTAGCAGGGTGGAGGTTTGCCAGCTACTATTACCAAGATATTTCCTTAAAGCCTAGATACAGAGGCAGTGTGGATGCACGGAGGAGCTCAAGCCTCATATACAGAGGCCTCTGGAGGATCCAGAAGGACCTGGAGCTGATGGAAAGCCCTTCATCTCTGGCTTATTGACACCTGCAGAGCTGATGGAGAAGCAGAAGGGCCTTTCTAGAAACGGCTTCAACCAGTTTGCCAGCGACCGCATCTCCTTCCACCGCAGTCTTGGTGTAGACACACGCCCCCTCGAATGCGTTGAGCAGAAGTTCAGCAGATGTCCACGGTTACCCTCCACCAGCGTGATTATTGTGTTCCACAATGAGGCGTGGTCCACTCTTCTCCGCACCATCTGCAGTGTCTTACATACTTCACCTGCTGTTTTACTTAAAGAAATCATACTGGTGGATGATGCAAGTACTCAAGatcaTCTCAAAGCCCCATTAGATCAGTATGTCCAGTCCCTTGAGACTGTGCGTGTCCTGAGGCAGCGTGAGAGGAAGGGTCTAATCTCTGCCAGACTGATGGGTGCACGAGAGGCTGGAGGAGAGGTGCTTGCCTTCCTG
>XM_043225379.1
CCCAGCTCCAGTTTAGTCACAAATATTTCGCTTGCTTCCTAAATACCAGCTCAGTCCATTTACTAATCTGCTGTTCCTTAGATTACGACTTGTTTGTAGAGGAAATAACCCGAGGGTTAAATTATCCAATGAGATGCACCTGGCATGCTGCTTTAAGAAAATGTAACGCGAGccattttctgaatattttctgtGGCGTGTAAGTTTACAACTGAAAGGTGGTTACAAGGCGTCGCTTTAGTGTAGgATGAGCTTACAAAGTCCTCAATGTACACTACCCATAAAACTGAGCATCTTGGGACTGACCTTTTTAATCACTATTTTATGGGTATTACTGCTGGATCTAGCAGGGTGGAGGTTTGCCAGCTACTATTACCAAGATATTTCCTTAAAGCCTAGATACAGAGGCAGTGTGGATGGTAATTACAGTAGCATCTGGCATATACGGACGTATACCTCTATACCACCCTTTGAAAGGGCTTTAGCGTTATCTGGAGATGCCAGATGTCCCTCTGGGTTCTACAGCACGGAGGAGCTCAAGCCTCATATACAGAGGCCTCTGGAGGATCCAGAAGGACCTGGAGCTGATGGAAAGCCCTTCATCTCTGGCTTATTGACACCTGCAGAGCTGATGGAGAAGCAGAAGGGCCTTTCTAGAAACGGCTTCAACCAGTTTGCCAGCGACCGCATCTCCTTCCACCGCAGTCTTGGTGTAGACACACGCCCCCTCGAATGCGTTGAGCAGAAGTTCAGCAGATGTCCACGGTTACCCTCCACCAGCGTGATTATTGTGTTCCACAATGAGGCGTGGTCCACTCTTCTCCGCACCATCTGCAGTGTCTTACATACTTCACCTGCTGTTTTACTTAAAGAAATCATACTGGTGGATGATGCAAGTACTCAAGatcaTCTCAAAGCCCCATTAGATCAGTATGTCCAGTCCCTTGAGACTGTGCGTGTCCTGAGGCAGCGTGAGAGGAAGGGTCTAATCTCTGCCAGACTGATGGGTGCACGAGAGGCTGGAGGAGAGGTGCTTGCCTTCCTGTTGGCCTTGCTGCGGTTATCTCGGTTTGTTGTCAATCTttgtcttctggacaactgCCAGATCAACAGTGAGTGTTTCTATGGTTGGTTGGAGCCCCTGTTGGCCCGGTTAGTTCAGGAACCTACCACAGTTGTGAGCCCAAGCATTGCTGTCATCAACAAGAACAATCTACAGTTCGTTAAGCCAGTGGTGTCGGCCCGCACACACTCTCGCGGGAACTTTGACTGGATCCTGAGCTTCGGCTGGGAGACAATACCTGAAGAAGAGAGAGTGAAACGCAAAGATGAAACTTATCCAGTCAGGACACCCACAATTGCTGGTGGGCTTTTTGCTATTTACAAGCAGTTCTTTGAACATGTTGGAACTTATGATGACAAGATGGAGTTTTGGGGAGCAGAGAACATAGAAATGTCATTTAGGGTATGGTTGTGTGGAGGTAGGCTAGAGATCATTCCTTGTTCTGTGGTCGGCCACATCTTTCGCACCAGAAGTCCACATTCCTTCTCTAAAGGTATAGATGTGATTGCACGCAACCAGGTTCGCCTCGCAGAAGTCTGGATGAATGATTACAAGAAGATTTTctacaacagaaataaaaaagctgCTTCTATTGCAGCAGGGAAATCATACGGGGACATCAGTGAGCGGCTACGGCTCAAAGAAAGACTGAATTGCAAAAACTTCTCCTGGTTCCTCGAAAACGTTTACCCTGAGGCTTTTGTGCCCCATTTAAACCCTGTGCTGTTCGGATCGTTAAAGAACATTGCCACAAACACTTGTCTTGATATTGGTGAAAAGAATTTTGGAGGGAAGTCggtgattttattcatttgccaCAACATGGGAATCAATCAGtATTTTGAGTACACGTCACATCAGGAGCTGAGGCATAATATTGATAAGCAGCTGTGTCTGCATGCAACGATCGAGCCTGAACCCGTGCGAGTGGAGCTGTGCAACTTTCAGGGCGAAGGAACCGTCCCAGCTCCACAGCAGACGTGGACTTTCATTCTTGCTTCCCAACAGATATATCTTGTCCACAATGCTCTATTTAATAAGTGTCTAATGGTGGAGTTTGGCAACATCATCATGAAAAACTGTGACCCTGCCAACAATTATCAGCACTGGTCTTTCATCTGATATGAAGTCAAAAGGGGCTCGTCCTCCATCAGATTACCCgattccttttttttgtaatgaaactGAAGTTTAAGGAATAGTTAATCAAATATCGCTGTTTTGCACTATTGTACGTTTTCTAAATCTGTCAACTGAATCTGAAtagattaaatgtaataaaatcattgtTTGTCAAATAATGCGCACTTTTAACTAACAGTTCTGTTTCTCGCATTGAAAGCTGATTAGCATTTGATcgttgtatttattaaataaaagctgatgatgcattaaaatgtctttgtgaGCAAGTTCACTTAAAAATCCTATCGAGTATGTACATTAACGCAAGGTGGCGCTaaagcaatataataaaattgtgtattattatgttCTGCGTGCAGCTGTtaacaaaatgctaaatgtctAAATCATTACAGTAGctttatgctaaatatatatgcGAATATGTCTAATCG

Function

NR:

description
PREDICTED: polypeptide N-acetylgalactosaminyltransferase 6-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU229703 False 1154 TUCP 0.47 5 4831818 4834520
XM_043225379.1 True 2643 mRNA 0.44 12 4827478 4834305

Neighbor

gene id symbol gene type direction distance location
g6pd g6pd,LOC107723128,LOC107705737,LOC107693547,LOC107697003 coding downstream 299 4815822 ~ 4827179 (-)
naa10 naa10,LOC107705681,LOC107693544,LOC107723122,LOC107696956 coding downstream 12153 4811788 ~ 4815325 (-)
prpf6 prpf6,LOC107705744,LOC107697009,LOC107673318 coding downstream 261204 4551029 ~ 4566274 (-)
edem2 edem2,LOC107697010 coding downstream 281072 4540302 ~ 4546406 (-)
si:ch211-117c9.2 LOC107750896,LOC107696933 coding downstream 297142 4521926 ~ 4530336 (-)
adcy6a adcy6a,adcy6,LOC107705664 coding upstream 1461 4835981 ~ 4877028 (-)
ddx23 ddx23,LOC107705733 coding upstream 79970 4914490 ~ 4920882 (-)
nkain4 nkain4,LOC107693550,LOC107696930,LOC107601334,LOC107705734,LOC107594068 coding upstream 93509 4928029 ~ 4977122 (-)
gss gss coding upstream 241833 5076353 ~ 5082995 (-)
sla2b LOC107705729,LOC107696991,LOC107594020,LOC107724197,LOC107693557 coding upstream 259313 5093833 ~ 5110924 (-)
G155096 NA non-coding downstream 96338 4727854 ~ 4731140 (-)
G155093 NA non-coding downstream 114396 4712689 ~ 4713082 (-)
G155092 NA non-coding downstream 117141 4707665 ~ 4710337 (-)
G155085 NA non-coding downstream 147199 4679983 ~ 4680279 (-)
G154933 NA non-coding downstream 277260 4546883 ~ 4550218 (-)
G155112 cacnb3a,LOC107705735,LOC107696997,LOC107724200,LOC107601341 non-coding upstream 74398 4908918 ~ 4943017 (-)
G155153 NA non-coding upstream 250622 5085142 ~ 5089097 (-)
G155156 NA non-coding upstream 262012 5096532 ~ 5097130 (-)
G155157 NA non-coding upstream 277324 5111844 ~ 5112964 (-)
LOC122329300 NA non-coding upstream 596026 5430546 ~ 5431524 (-)
LOC122329268 LOC107707377,LOC107673205,LOC107746501,LOC107697018,LOC107601321,LOC107598138,LOC108443130,LOC103026736,LOC106572423 other downstream 632480 4173914 ~ 4194998 (-)
lad1 LOC107746516,LOC107696941,LOC107559160 other downstream 921586 3894966 ~ 3905892 (-)
tspan2b tspan2b,LOC107709234,LOC107696969,LOC107746340,LOC107566064,LOC107673514,LOC107554202 other downstream 1309336 3502265 ~ 3518142 (-)
LOC122328836 LOC107566068 other downstream 1381514 3434124 ~ 3445964 (-)
G154446 NA other downstream 1870206 2925048 ~ 2957272 (-)
G155227 si:zfos-452g4.1,LOC107724183,LOC107663057,LOC107696954,LOC107551515,LOC107705659,LOC107593949 other upstream 619897 5454417 ~ 5455047 (-)
LOC122329286 nav1b,LOC107666060,LOC107595432,LOC107740254,LOC107696445,LOC107587625 other upstream 643321 5477841 ~ 5479822 (-)
LOC122329188 LOC107709248,LOC107687290,LOC107558915,LOC107671882,LOC107572785,LOC107723742,LOC107701749,LOC107549048,LOC107756350 other upstream 649692 5484212 ~ 5496474 (-)
G155489 LOC107681366,LOC107727023,LOC107705691 other upstream 1896331 6730851 ~ 6731886 (-)
rps21 rps21,LOC107666483,LOC107681394,LOC106572905 other upstream 1932088 6766608 ~ 6823032 (-)

Expression


Co-expression Network