G15416


Basic Information

Item Value
gene id G15416
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 4797476 ~ 4797794 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU17237
TATGGTAGCAACGTTTTAGGTTCTACGGATTTAACTTAAATTTACAGTAAAATACCGTATTTCATTAACTGATATAATGTTAATTTTCTAACATATTGAAGAACTAATATCTGTTTTGTACCTTTATAATACACTGACAACCACCAAACACAGTGGTGATGAGAGTCACATGATGAATCAAAGTTCATCACAAGCTGAGAAGGACAATACTAATATATAGAAGGTCATTCACACAAACACTAAACACCAAAACATCAATTTAACTACATTAGATGTAACATAAAACCCTAATGTACATAACTGATTAGAAAAAAAAACG

Function

NR:

description
interferon-induced protein 44-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17237 True 319 lncRNA 0.30 1 4797476 4797794

Neighbor

gene id symbol gene type direction distance location
CI01000001_04779079_04792659 SLC17A9B, SLC17A9 coding upstream 4649 4778937 ~ 4792827 (+)
CI01000001_04773238_04776581 MGC83062, GID8, GID8.L, CT011, GID8A, GID8B coding upstream 20147 4772701 ~ 4777329 (+)
CI01000001_04723418_04724292 NA coding upstream 73118 4723354 ~ 4725671 (+)
CI01000001_04701645_04713999 NA coding upstream 83323 4701645 ~ 4714153 (+)
CI01000001_04688934_04700615 HCK, SRMS coding upstream 96772 4688934 ~ 4700704 (+)
CI01000001_04901365_04901652 NA coding downstream 103481 4901275 ~ 4902567 (+)
CI01000001_04914279_04922772 RND1B, RND1, RND1A coding downstream 116356 4914150 ~ 4923679 (+)
CI01000001_04936808_04943256 PRIM1 coding downstream 139014 4936808 ~ 4943455 (+)
CI01000001_04950531_04960550 NACA, NACA.2 coding downstream 152737 4950531 ~ 4960695 (+)
CI01000001_04962494_04971921 NA coding downstream 164700 4962494 ~ 4972231 (+)
G15395 NA non-coding upstream 39057 4753717 ~ 4758419 (+)
G15389 NA non-coding upstream 70736 4598677 ~ 4726740 (+)
G15404 NA non-coding upstream 230934 4566270 ~ 4566542 (+)
G15371 NA non-coding upstream 306095 4486920 ~ 4491381 (+)
G15419 NA non-coding downstream 3179 4800973 ~ 4801530 (+)
G15789 NA non-coding downstream 137577 4935371 ~ 4935990 (+)
G15798 NA non-coding downstream 205376 5003170 ~ 5003390 (+)
G15800 NA non-coding downstream 208028 5005822 ~ 5006037 (+)
G15812 NA non-coding downstream 243572 5041366 ~ 5041565 (+)
CI01000001_03618075_03620436 NA other upstream 1176025 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 3126472 1667762 ~ 1671167 (+)
G13051 NA other upstream 3752324 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 4305419 483853 ~ 488825 (+)
G12614 NA other upstream 4486535 309144 ~ 310941 (+)
G15794 NA other downstream 263424 5061218 ~ 5064704 (+)
CI01000001_05279884_05287123 NA other downstream 488955 5279837 ~ 5287698 (+)
G15995 NA other downstream 914091 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 2734778 7531541 ~ 7540586 (+)
G17234 NA other downstream 3234330 8032124 ~ 8032483 (+)

Expression


Co-expression Network