LOC122329286 (nav1b,LOC107666060,LOC107595432,LOC107740254,LOC107696445,LOC107587625)


Basic Information

Item Value
gene id LOC122329286
gene name nav1b,LOC107666060,LOC107595432,LOC107740254,LOC107696445,LOC107587625
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 5477841 ~ 5479822 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU229892
CTAAAGGAGACCCTAGGGCAGTTGATAAGGTGAAAATGTCCGTCAAGGCGACGGGTCTCCAGCGTTCTCGCTCCGACGCCGGCCGGGACAACGAGCACCGCAAGCCTCCTTCAGGTCTGGTCAAACCCTCGGCCGGAGGCTCGTTCGGTTACAAGAAACCTCTGACGACCGGAACCGCCACCGTCCTGACAGCAGGAGGCGCCACCATCACCAGCGGCTCGGCCACCGTCGGCAAGACCCCCAAGTCCTCGGGCATCCCCATCAAACCCGTCCCAGGCGGAGGAGGCCGCAAAAACAGTCTGGACGCCAGCGGCTCTGAACAGGGTTTCCTGGCCCCCAACGCTCGTGGGAGCATTCAGTACCGCAGTCTGCCGCGGCCCGCCAAATCCAGCGCTATGAGCTTAACCGGTCGCCCTTCCTCTCGCCCTGTCAGCGGCAGCATCGACGCCGGTCTCCTCACCCTCAAACCCGTACCGCCTCTGGCCAGCACCATGCCCACCAGGGGAAAAGACGGAGGCAGCTTGAAAGCGTCTAGTCGCCCGAGCACCACCGGACCCGTCAACCAGACGGACcgagagaaggagaaggagagggCCAAGGCCAAAGCCGACCTGGAGATCAGCTGCCTGAAGGCCGAGAGCCAGAGCGACAGCTGCGCGGAGACTGTGGAGAAGATGCATCGTGTGCGGAGGACGAGCACGAGCAAATACCCAGAACTGAGCTCTCCGACCAGCACGCCGAGGTTGTTGAGCACTAAGTCTCTAGTTCATCCTCCCAGCCTGGCTCTCCTAGACAAGGTCAACTCCAACAGTCTGGACTCCTGTATCACCATCCATGACCTTCCTCCGAAGATCCCTCCCTACTCCAAGCTGCAGGACCTGGCGGGCTCCCGGGTTCCTCCTCGGCTCACCCCGAGCCCGGCTCCGGTGCTCCACATCGACTCTCCCAGCTGTTTCTCAGGCCAGACGCTGTCGGTCAGCAGCTCCCCAATACTCTACCCCAAGATGTCCGGCCTGCACCGCAGCATGGAGTCACTGCCGCTTCACATGAGCGTCCCCGCCAAACCGGACCTGGGAGAGCGGGATGAAGCCAGGAGCACTGGGACATGGGGCGCTGGCAGCCGGACGTCCATCACTTTGGGC
>XM_043225511.1
TGTCTAAAGGAGACCCTAGGGCAGTTGATAAGGTGAAAATGTCCGTCAAGGCGACGGGTCTCCAGCGTTCTCGCTCCGACGCCGGCCGGGACAACGAGCACCGCAAGCCTCCTTCAGGTCTGGTCAAACCCTCGGCCGGAGGCTCGTTCGGTTACAAGAAACCTCTGACGACCGGAACCGCCACCGTCCTGACAGCAGGAGGCGCCACCATCACCAGCGGCTCGGCCACCGTCGGCAAGACCCCCAAGTCCTCGGGCATCCCCATCAAACCCGTCCCAGGCGGAGGAGGCCGCAAAAACAGTCTGGACGCCAGCGGCTCTGAACAGGGTTTCCTGGCCCCCAACGCTCGTGGGAGCATTCAGTACCGCAGTCTGCCGCGGCCCGCCAAATCCAGCGCTATGAGCTTAACCGGTCGCCCTTCCTCTCGCCCTGTCAGCGGCAGCATCGACGCCGGTCTCCTCACCCTCAAACCCGTACCGCCTCTGGCCAGCACCATGCCCACCAGGGGAAAAGACGGAGGCAGCTTGAAAGCGTCTAGTCGCCCGAGCACCACCGGACCCGTCAACCAGACGGACcgagagaaggagaaggagagggCCAAGGCCAAAGCCGACCTGGAGATCAGCTGCCTGAAGGCCGAGAGCCAGAGCGACAGCTGCGCGGAGACTGTGGAGAAGATGCATCGTGTGCGGAGGACGAGCACGAGCAAATACCCAGAACTGAGCTCTCCGACCAGCACGCCGAGGTTGTTGAGCACTAAGTCTCTAGTTCATCCTCCCAGCCTGGCTCTCCTAGACAAGGTCAACTCCAACAGTCTGGACTCCTGTATCACCATCCATGACCTTCCTCCGAAGATCCCTCCCTACTCCAAGCTGCAGGACCTGGCGGGCTCCCGGGTTCCTCCTCGGCTCACCCCGAGCCCGGCTCCGGTGCTCCACATCGACTCTCCCAGCTGTTTCTCAGGCCAGACGCTGTCGGTCAGCAGCTCCCCAATACTCTACCCCAAGATGTCCGGCCTGCACCGCAGCATGGAGTCACTGCCGCTTCACATGAGCGTCCCCGCCAAACCGGACCTGGGAGAGCGGGATGAAGCCAGGAGCACTGGGACATGGGGCGCTGGCAGCCGGACGTCCATCACTTTGGGCGACAGGTGAGTTTGGGTCTGTTTGTTGGTTGATATTTAAATGAGGAAAGAATAAAGAATGACTGAACCTGGTT

Function

symbol description
nav1b Acts upstream of or within glial cell development and retina development in camera-type eye. Orthologous to human NAV1 (neuron navigator 1).

NR:

description
PREDICTED: neuron navigator 1-like isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU229892 False 1142 TUCP 0.63 2 5477914 5479819
XM_043225511.1 True 1218 mRNA 0.61 2 5477841 5479822

Neighbor

gene id symbol gene type direction distance location
LOC122329287 haus8,LOC107551529,LOC107696953,LOC107663059,LOC107577736 coding downstream 17717 5456665 ~ 5460124 (-)
LOC122329294 mrgbp,LOC107724191,LOC107705719,LOC107696984,LOC107693561 coding downstream 28243 5444767 ~ 5449598 (-)
eef1a2 eef1a2,LOC107724190,LOC107705720,LOC107551525,LOC107696983,LOC107693560,LOC108429306,LOC108276238 coding downstream 34308 5437518 ~ 5443533 (-)
sulf2b sulf2b,LOC107724188,LOC107693554,LOC107551524,LOC107705722,LOC108429304 coding downstream 122946 5233697 ~ 5354895 (-)
arhgap46b si:ch211-218g4.2,LOC107724193,LOC107696985,LOC107705724,LOC107693558,LOC107575029 coding downstream 245073 5170965 ~ 5232768 (-)
LOC122329290 zgc:92113,LOC107746330,LOC107554216,LOC107709233,LOC107697031,LOC107673507 coding upstream 25584 5505406 ~ 5509560 (-)
LOC122329296 LOC107673498,LOC107746338,LOC107709218,LOC107554217,LOC107696970 coding upstream 29873 5509695 ~ 5513388 (-)
LOC122329292 LOC107696963,LOC107559168,LOC107746530,LOC107707374,LOC107673558,LOC107598155 coding upstream 242666 5722488 ~ 5726263 (-)
LOC122329283 LOC107696925,LOC107724187,LOC107551517,LOC107594764,LOC107724182 coding upstream 337819 5817641 ~ 5824247 (-)
LOC122329222 eef1a2,LOC107724190,LOC107696983,LOC107551525,LOC107705720,LOC107693560,LOC108429306,LOC108276238 coding upstream 373287 5853109 ~ 5858747 (-)
LOC122329300 NA non-coding downstream 46317 5430546 ~ 5431524 (-)
G155157 NA non-coding downstream 364877 5111844 ~ 5112964 (-)
G155156 NA non-coding downstream 380711 5096532 ~ 5097130 (-)
G155153 NA non-coding downstream 388744 5085142 ~ 5089097 (-)
G155112 cacnb3a,LOC107705735,LOC107696997,LOC107724200,LOC107601341 non-coding downstream 534824 4908918 ~ 4943017 (-)
G155238 NA non-coding upstream 45219 5525041 ~ 5547708 (-)
LOC122329299 NA non-coding upstream 174196 5654018 ~ 5662956 (-)
G155254 NA non-coding upstream 335489 5815311 ~ 5919163 (-)
G155308 NA non-coding upstream 711275 6191097 ~ 6191320 (-)
G155388 NA non-coding upstream 869185 6349007 ~ 6351825 (-)
G155227 si:zfos-452g4.1,LOC107724183,LOC107663057,LOC107696954,LOC107551515,LOC107705659,LOC107593949 other downstream 22794 5454417 ~ 5455047 (-)
LOC122329181 LOC107601337,LOC107697001,LOC107723119 other downstream 643321 4827478 ~ 4834520 (-)
LOC122329268 LOC107707377,LOC107673205,LOC107746501,LOC107697018,LOC107601321,LOC107598138,LOC108443130,LOC103026736,LOC106572423 other downstream 1282843 4173914 ~ 4194998 (-)
lad1 LOC107746516,LOC107696941,LOC107559160 other downstream 1571949 3894966 ~ 3905892 (-)
tspan2b tspan2b,LOC107709234,LOC107696969,LOC107746340,LOC107566064,LOC107673514,LOC107554202 other downstream 1959699 3502265 ~ 3518142 (-)
LOC122329188 LOC107709248,LOC107687290,LOC107558915,LOC107671882,LOC107572785,LOC107723742,LOC107701749,LOC107549048,LOC107756350 other upstream 4390 5484212 ~ 5496474 (-)
G155489 LOC107681366,LOC107727023,LOC107705691 other upstream 1251029 6730851 ~ 6731886 (-)
rps21 rps21,LOC107666483,LOC107681394,LOC106572905 other upstream 1286786 6766608 ~ 6823032 (-)
ccm2l ccm2l,LOC107666505,LOC107551511 other upstream 1378185 6858007 ~ 6867300 (-)
LOC122328436 cables2b,LOC107681405,LOC107705686,LOC107551510,LOC107559848,LOC107726996,LOC107666605 other upstream 1484920 6964742 ~ 6981961 (-)

Expression


Co-expression Network