G155254


Basic Information

Item Value
gene id G155254
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 5815311 ~ 5919163 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU229923
TATTtccaaaattgtattttgaagACAAGTAGTGcttacaaagtttttttttttgtttgtttgtttttttttcaagtgatGACATGAACAACCCTGTTCAAACTGACTTTTGTACAGTAAATATGAAATTCATTTATAGCAGGCTTATTAACCCtcaagtattttgtattttttttctttttatcttgttttttttttttttttttacttttttttttcagagtggAGCTGGTTACATGTACACAAACATTTACCCCGAAACTGATTCGTCTTTTCTTAGCGGTCACTGAAATGCAGTCCggttataaaaacatcaaaagtcCTCCGCCGCTCCACTCTGTCAGCCCCAGGTTAAATGTGTCCGCAGATGTTCTTCAGGTTTCTCCTGTGGCCGCCCGCGGTGGAGACGCAGCCCCCAGCGCTAACCCTTCCCACGCACCTCTCGGCCCCGGGCGCTGGAAGAATAAGGGAATCCCATGGTCGAAGCCATGGCTCTGGAAGAGGCTCCTCCAGGATTTCAACGAACGCCGCTCTCAGCATTTTCTTCACAGAAGAAAACCCCCTCTTAGGGCCTGTGAAACCTGATCGAGAGGAGACGAATCAACAAAGGTGCCTTTCGCAATCGCGACCGGCAACAGCAATCGGTTATTTTTAGTAAGATCGTGCGTGAGAGCTCTAAACGGCCGCTGACGTCCCGATTGGGCGCGCTATCCAAAACCCGCTCGGGGTCGAGGCGACACGCTGGTGGTTTTTACACGCGGGCGCTTTTGTGTGGCTGtcgttttttggttttgtggATGTAAAAATAGCGCGGGGCGCATACTGACCTCGTTAGGTGTTTGCTCGAAGCGTGGACCTCCATCTCGGTGCTTTTGAACTCGTTCAGCTCTTTACGGATGGCCGCCTGCGGAATCGCAAATAAAAGCCACTTAAGCGCATCCTCGAGTGACATGCGCGCTCCGTAATGAGTCGGTCGAGACTACTGACACAAATCAGAGCGCTTTTTAGCGAATGCAACTGGGCTTAGAAACCTTGAGAGGACCGGCGAGACTCAAGGAGAGCCCGTTTGGCTCCGTGCGCTCTTATTGAATTAAAGACCGGCCGTGCGTTTGCTGAGGTCGGCTCTTCGTCTCGTACCTTGTCAGCCGCGGACAGTCTTGTCCAGGGTTTGTCGGCTCTCCTGTCGTAGTCCTGGGCTTTGGCCACCTCCACGTAGTCACTGAAGCGGATCagaatctttctctctcttagcTCATCGACTGTCGGCCTCTGGTTGAGCTGCGGGACggacaaaacaaagcaaattcTCAACATCGCTGGTCCATAAAGTCGCTTTAACTTTCgggaaaataaagctttttgttGAAAGTTAATTGGCATAGAGGTTGGCTTTCTTCTCTATGCTgctttatctgtatttttaccGTTCGGTTCGTTCCCCTTCCACCCAGTCATTCTCGAGAGGCGTAAACAaagcaagaagaaaaacataCGAGCAAAGTTCTTGAATCTTAAAAAACTCGGCTTGTCATCGAACAGCTCCAGACGGTGTTTTATGTCTTATTgcaagtaataatattttcagcaGCAGCACTTTACAGACCGACGGCCTCCTTACCaccaaaatctgaaaaatacaGCACGCATGCCACTGAAATGAACCTGAAGAGAGCGTGTTTACCTTTCTGTTGAGTCTCTGTTTGATCTCTCTTCTTTCCTCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU229923 True 1723 lncRNA 0.47 2 5815311 5919163

Neighbor

gene id symbol gene type direction distance location
LOC122329292 LOC107696963,LOC107559168,LOC107746530,LOC107707374,LOC107673558,LOC107598155 coding downstream 89048 5722488 ~ 5726263 (-)
LOC122329296 LOC107673498,LOC107746338,LOC107709218,LOC107554217,LOC107696970 coding downstream 301923 5509695 ~ 5513388 (-)
LOC122329290 zgc:92113,LOC107746330,LOC107554216,LOC107709233,LOC107697031,LOC107673507 coding downstream 305751 5505406 ~ 5509560 (-)
LOC122329287 haus8,LOC107551529,LOC107696953,LOC107663059,LOC107577736 coding downstream 355187 5456665 ~ 5460124 (-)
LOC122329294 mrgbp,LOC107724191,LOC107705719,LOC107696984,LOC107693561 coding downstream 365713 5444767 ~ 5449598 (-)
sycp2 LOC107696925 coding upstream 610 5919773 ~ 5936063 (-)
ppp1r3da ppp1r3da,LOC107722761,LOC107696952,LOC107593910,LOC107551518,LOC107663071 coding upstream 18469 5937632 ~ 5939803 (-)
ttll9 ttll9 coding upstream 25518 5944681 ~ 5949953 (-)
edn3b LOC107551532,LOC107696951,LOC107705677,LOC107663060 coding upstream 38002 5957165 ~ 5966425 (-)
cntn3a.1 cntn3a.1,LOC107696975,LOC107663068,LOC107705712,LOC107551535,LOC108438208,LOC105900126 coding upstream 109741 6028904 ~ 6084299 (-)
LOC122329299 NA non-coding downstream 152355 5654018 ~ 5662956 (-)
G155238 NA non-coding downstream 267603 5525041 ~ 5547708 (-)
LOC122329300 NA non-coding downstream 383787 5430546 ~ 5431524 (-)
G155157 NA non-coding downstream 702347 5111844 ~ 5112964 (-)
G155156 NA non-coding downstream 718181 5096532 ~ 5097130 (-)
G155308 NA non-coding upstream 271934 6191097 ~ 6191320 (-)
G155388 NA non-coding upstream 429844 6349007 ~ 6351825 (-)
G155413 NA non-coding upstream 565491 6484654 ~ 6484915 (-)
G155391 krt8,LOC107551542,LOC108411779,LOC107727027,LOC105023875,LOC107681390,LOC107568038,LOC107705700 non-coding upstream 566276 6485439 ~ 6499749 (-)
G155392 LOC107559866,LOC107705699,LOC107666380,LOC108429286 non-coding upstream 590552 6509715 ~ 6514093 (-)
LOC122329188 LOC107709248,LOC107687290,LOC107558915,LOC107671882,LOC107572785,LOC107723742,LOC107701749,LOC107549048,LOC107756350 other downstream 318837 5484212 ~ 5496474 (-)
LOC122329286 nav1b,LOC107666060,LOC107595432,LOC107740254,LOC107696445,LOC107587625 other downstream 335489 5477841 ~ 5479822 (-)
G155227 si:zfos-452g4.1,LOC107724183,LOC107663057,LOC107696954,LOC107551515,LOC107705659,LOC107593949 other downstream 360264 5454417 ~ 5455047 (-)
LOC122329181 LOC107601337,LOC107697001,LOC107723119 other downstream 980791 4827478 ~ 4834520 (-)
LOC122329268 LOC107707377,LOC107673205,LOC107746501,LOC107697018,LOC107601321,LOC107598138,LOC108443130,LOC103026736,LOC106572423 other downstream 1620313 4173914 ~ 4194998 (-)
G155489 LOC107681366,LOC107727023,LOC107705691 other upstream 811688 6730851 ~ 6731886 (-)
rps21 rps21,LOC107666483,LOC107681394,LOC106572905 other upstream 847445 6766608 ~ 6823032 (-)
ccm2l ccm2l,LOC107666505,LOC107551511 other upstream 938844 6858007 ~ 6867300 (-)
LOC122328436 cables2b,LOC107681405,LOC107705686,LOC107551510,LOC107559848,LOC107726996,LOC107666605 other upstream 1045579 6964742 ~ 6981961 (-)
LOC122329304 ccm2l,LOC107666505,LOC107551511 other upstream 1075004 6994167 ~ 7003523 (-)

Expression


Co-expression Network