G155489 (LOC107681366,LOC107727023,LOC107705691)


Basic Information

Item Value
gene id G155489
gene name LOC107681366,LOC107727023,LOC107705691
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 6730851 ~ 6731886 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU230261
CCTTCAAATAGTCATTCTCCGACCTGAGTTCCTCGTGCATCCCGTCCATTAATTCCTCGGTCAGGTCCGAAAACGCCAAGGACGTGCTGGCGGGCATCCTGCTGTCGAACGAGGTGAGCGAGCGCTCGTCGCCGGGAGAGACGCTCCCCTCCGCGGTCTCCATTCCCAGCGAGAGCCGCTCTTTCTCCACGCCGGTCTTGGTTTGACCGCTCTTGTCCAAGAGTCCGCGCTCCGCCGGCGCTTTCTCGCCGTCGACCGCCCCTCGGCTGATGCTCTCGGTGTCGCTGCTGAGCGCGTCCGTGGACGCTTTATTCTCCTCGGAGGCGCAGTCGGAGAGCTCGGAGCTGCTGTCGGTGGGTGAGAGTCTCCCCGGAGCGCAGCCGGAGTCCTTGCTCAGGTCATCCGAGCCGATGCTGGCGTCCGAAACTTTTCTCCGACCGCTTTTATTAGACTTCGCGACGCTCTTCTGAGCACCGGCCGCGGACAGCGCGGGTTTGCCGGCCGGTTTACTCTTTTCCGTTTTCGTTTCCTTCCCGGCAACCGGGCTCCGTCTGGACACGCGGCCGCCTAAATATATGGCCCCCGGTTTAACGCTCAGCGTCGGCGTGCCGATACCCCCGCGGATTTTAGTGAGGGACCACCCGGGCACGTCTTTGGGTCTCGCCGGGGACGGTGCCCggtgtattttctttttctcggTAACTTGTAGCGGCTGCGCAGGCGGCTGCTGCTGCGAAGGCTGCGGCTGCTCTTGTTCTCCGCTGCTGCTCTCCATTTTCTGCTTTTGCCTCTTCTCCTTCGACGAGACAAAATGCGTCGGGGAACCGGTGTCAACCTTTGTCTTGGTCATTCATTCCGTTTACGAGACCCGAGTATAGCTGAAATGTACCTCCTCTCCTCGAACACAGAAGTTGAACCGATAAACGCTTCGCACCAGATCACACCAAATCCAAAAGATAGCGTGACTGCGCGGCTCGAGACGCTCCCGTTTTCCAGTGGTATCCCCGCGCGTCCT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230261 True 1015 TUCP 0.60 2 6730851 6731886

Neighbor

gene id symbol gene type direction distance location
osbpl2b osbpl2,osbpl2b,LOC107727008,LOC107681391,LOC107666451,LOC107705692 coding downstream 9281 6713359 ~ 6721570 (-)
adrm1 adrm1,LOC107727009,LOC103354471,LOC108276396 coding downstream 17644 6708712 ~ 6713207 (-)
slc16a7 slc16a7,LOC107559865,LOC107705697,LOC107666398,LOC108429289 coding downstream 128768 6598718 ~ 6602083 (-)
zgc:171775 zgc:171775,LOC107705698,LOC107551519,LOC107681372,LOC107666627,LOC107559857,LOC107727002 coding downstream 209007 6515811 ~ 6521844 (-)
krt18a.1 krt18,LOC107727028,LOC107681396,LOC107551541,LOC107666358,LOC107705701,LOC107568050 coding downstream 272932 6454153 ~ 6457919 (-)
acss2 acss2,LOC107681393,LOC107551550,LOC107666475,LOC107559859 coding upstream 73483 6805369 ~ 6819843 (-)
cables2b cables2b,LOC107681405,LOC107705686,LOC107551510,LOC107559848,LOC107726996 coding upstream 106921 6838807 ~ 6857465 (-)
LOC122328429 xkr7,LOC107551551,LOC107666518,LOC107681407,LOC107559858,LOC107705685,LOC107727032,LOC108435212 coding upstream 140091 6871977 ~ 6926416 (-)
LOC122328474 LOC107551551,LOC107666518,LOC107727032,LOC107705685,LOC107681407,LOC107559858 coding upstream 277011 7008897 ~ 7060251 (-)
sox18 sox18,LOC107727030,LOC107681403,LOC107705673,LOC107551552,LOC107666636,LOC107579252 coding upstream 356291 7088177 ~ 7091244 (-)
G155443 NA non-coding downstream 105583 6624419 ~ 6625268 (-)
G155435 NA non-coding downstream 118327 6611993 ~ 6612524 (-)
G155392 LOC107559866,LOC107705699,LOC107666380,LOC108429286 non-coding downstream 216758 6509715 ~ 6514093 (-)
G155391 krt8,LOC107551542,LOC108411779,LOC107727027,LOC105023875,LOC107681390,LOC107568038,LOC107705700 non-coding downstream 231102 6485439 ~ 6499749 (-)
G155413 NA non-coding downstream 245936 6484654 ~ 6484915 (-)
LOC122328996 NA non-coding upstream 62217 6794103 ~ 6804919 (-)
G155508 NA non-coding upstream 103489 6835375 ~ 6835589 (-)
G155578 NA non-coding upstream 105243 6837129 ~ 6838566 (-)
G155586 NA non-coding upstream 197800 6929686 ~ 7067824 (-)
G155597 NA non-coding upstream 368422 7100308 ~ 7106154 (-)
LOC122329188 LOC107709248,LOC107687290,LOC107558915,LOC107671882,LOC107572785,LOC107723742,LOC107701749,LOC107549048,LOC107756350 other downstream 1234377 5484212 ~ 5496474 (-)
LOC122329286 nav1b,LOC107666060,LOC107595432,LOC107740254,LOC107696445,LOC107587625 other downstream 1251029 5477841 ~ 5479822 (-)
G155227 si:zfos-452g4.1,LOC107724183,LOC107663057,LOC107696954,LOC107551515,LOC107705659,LOC107593949 other downstream 1275804 5454417 ~ 5455047 (-)
LOC122329181 LOC107601337,LOC107697001,LOC107723119 other downstream 1896331 4827478 ~ 4834520 (-)
LOC122329268 LOC107707377,LOC107673205,LOC107746501,LOC107697018,LOC107601321,LOC107598138,LOC108443130,LOC103026736,LOC106572423 other downstream 2535853 4173914 ~ 4194998 (-)
rps21 rps21,LOC107666483,LOC107681394,LOC106572905 other upstream 34722 6766608 ~ 6823032 (-)
ccm2l ccm2l,LOC107666505,LOC107551511 other upstream 126121 6858007 ~ 6867300 (-)
LOC122328436 cables2b,LOC107681405,LOC107705686,LOC107551510,LOC107559848,LOC107726996,LOC107666605 other upstream 232856 6964742 ~ 6981961 (-)
LOC122329304 ccm2l,LOC107666505,LOC107551511 other upstream 262281 6994167 ~ 7003523 (-)
G155596 sox18,LOC107727030,LOC107681403,LOC107551552,LOC107666636,LOC107705673,LOC107571663 other upstream 544562 7276448 ~ 7278323 (-)

Expression


Co-expression Network