LOC122328436 (cables2b,LOC107681405,LOC107705686,LOC107551510,LOC107559848,LOC107726996,LOC107666605)


Basic Information

Item Value
gene id LOC122328436
gene name cables2b,LOC107681405,LOC107705686,LOC107551510,LOC107559848,LOC107726996,LOC107666605
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 6964742 ~ 6981961 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU230394
GCCAGTGCGGAACAATGTGAGCGCAGCGGGCCCGAGTGATGCCGAGTTTCAGTGCTCTGACATCGGTGCGACTGTGAACGAACTGTCCGCTGCGGCCAGTAGCGATGGGACCTTCTCCAGCCTCTCTGTGCCCAGACTCGGGCTGCTCGGCGTACCGCCCATCCTGGTCCTGCCGTCGGATTCTGGGTTTAGCAACCCCGGGAGCACCGAGATGTTCCTGGAGAGGGAGAGGGGCTCGTTCTCCTCGCAGAGCAACCTCCTGTCCCCCTGCAGTCTGCAGCCCACTCCGCTCGGAGCGCGGAAGTCTCCAACGCTGCTGTCGGTGCAGAGCTGCGGCTCCTCGCTGGAGTCTCGTCCGCGGAGTCGGAACGCATCTGGCTCTCCTCGTCCACGCTCCGTGAAGAAAGTCCACTTTATTAAGAACATGAGGCAGTATGATACCAGGGGCAGCAGGATCGTGCTTATCTGCGCCAAAAGGTCTTTGTGTGCCGCCTTCTCTGTGCTGCCTTATGGAGAGAGCTTCCACATCAGTGACCCTCGTCTGGATGCCCAGCGGCGGAGGCACTCATCTGGAGGAATATCCACCACCCTAGAGATGCTTCCCGGGCTAGAAGGGGTGGAACTGGGCATGTACGGCAGGACGGTGTCGTACGCTCAGTTCCTGTACCCAACTAACGCTCTGGACCGCCACAAGCCCGCAGTGGATCTCGCTCTACCCGTGCCCTATTCCAGAAACAGCATCCCTTGCAGTTATCCTCCCTCTCGCCTTAACAGCACCGTCGGCCTGGACCTGGGCCTTGAAGACATTGACTATGACCCTAATGTGCTCAGTGACCCACGGTGGCCATGTGGAAAACATAAAAGAGTGCTCATCTTTGCCTCATACATGGTGAGAGagattattattgattatttatcatatattgGTTATTATCTTGTTGTTACTTTTAAAT
>XM_043224124.1
CGAGCGGCGGCGGACGCGGTTTACTCGAGAATGGCGGCTGCTGCGTGCAGTACGCAGAGCACTCTGAACCCATGCGCTGGCAAGCTGCTCCGAGAGCACCTGCGGAAAAGTAAAGATTCGCGGAGGAGGCAAGCCGCGCTTTTGTTTCTCACTAATATCCTGGACGGTCGGCCAGTGCGGAACAATGTGAGCGCAGCGGGCCCGAGTGATGCCGAGTTTCAGTGCTCTGACATCGGTGCGACTGTGAACGAACTGTCCGCTGCGGCCAGTAGCGATGGGACCTTCTCCAGCCTCTCTGTGCCCAGACTCGGGCTGCTCGGCGTACCGCCCATCCTGGTCCTGCCGTCGGATTCTGGGTTTAGCAACCCCGGGAGCACCGAGATGTTCCTGGAGAGGGAGAGGGGCTCGTTCTCCTCGCAGAGCAACCTCCTGTCCCCCTGCAGTCTGCAGCCCACTCCGCTCGGAGCGCGGAAGTCTCCAACGCTGCTGTCGGTGCAGAGCTGCGGCTCCTCGCTGGAGTCTCGTCCGCGGAGTCGGAACGCATCTGGCTCTCCTCGTCCACGCTCCGTGAAGAAAGTCCACTTTATTAAGAACATGAGGCAGTATGATACCAGGGGCAGCAGGATCGTGCTTATCTGCGCCAAAAGGTCTTTGTGTGCCGCCTTCTCTGTGCTGCCTTATGGAGAGAGCTTCCACATCAGTGACCCTCGTCTGGATGCCCAGCGGCGGAGGCACTCATCTGGAGGAATATCCACCACCCTAGAGATGCTTCCCGGGCTAGAAGGGGTGGAACTGGGCATGTACGGCAGGACGGTGTCGTACGCTCAGTTCCTGTACCCAACTAACGCTCTGGACCGCCACAAGCCCGCAGTGGATCTCGCTCTACCCGTGCCCTATTCCAGAAACAGCATCCCTTGCAGTTATCCTCCCTCTCGCCTTAACAGCACCGTCGGCCTGGACCTGGGCCTTGAAGACATTGACTATGACCCTAATGTGCTCAGTGACCCACGGTGGCCATGTGGAAAACATAAAAGAGTGCTCATCTTTGCCTCATACATGACAACAGTAATAGAGTACGCCAAACCGTCAGATCTGAAAAAGGACATGAATGAGACCTTTAAGGAAAAGTTCCCCCACATCAAACTCACACTGAGCAAAATCAGAAGTTTGAAGAGAGAAATTCGTTCAGTAGGAGAGGAGTCTTCCTTGCAGCCGGTTACCATAGCCATGGCTTTTGTGTACTTTGAGAAGCTGGTCCTGCAGGGGCGTCTCAACAAGCAGAACAGGAAGCTGGTGGCAGCCGCGTGCCTACTGCTCGCCGCTGCCAAGATCAGCAGCGACCTGAAGAAACAAGAGGTCAAGCAACTGATTGACAAACTGGAGGAGAGGTTCCGGATTAGCCGTCGAGAGCTGATCGCTTTTGAGTTCACCATCTTGGTGGCTCTGGAAATGGCGCTTTACCTACCGGAGAGCAAAGTCATGCCCCACTACCGCAAACTGGTGCAGCAGACCTGAC

Function

symbol description
cables2b Predicted to act upstream of or within regulation of cell cycle. Orthologous to human CABLES2 (Cdk5 and Abl enzyme substrate 2).

NR:

description
PREDICTED: CDK5 and ABL1 enzyme substrate 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230394 False 953 TUCP 0.57 6 6966827 6981789
XM_043224124.1 True 1516 mRNA 0.57 11 6964742 6981961

Neighbor

gene id symbol gene type direction distance location
LOC122328429 xkr7,LOC107551551,LOC107666518,LOC107681407,LOC107559858,LOC107705685,LOC107727032,LOC108435212 coding downstream 38326 6871977 ~ 6926416 (-)
cables2b cables2b,LOC107681405,LOC107705686,LOC107551510,LOC107559848,LOC107726996 coding downstream 107277 6838807 ~ 6857465 (-)
acss2 acss2,LOC107681393,LOC107551550,LOC107666475,LOC107559859 coding downstream 144899 6805369 ~ 6819843 (-)
osbpl2b osbpl2,osbpl2b,LOC107727008,LOC107681391,LOC107666451,LOC107705692 coding downstream 243172 6713359 ~ 6721570 (-)
adrm1 adrm1,LOC107727009,LOC103354471,LOC108276396 coding downstream 251535 6708712 ~ 6713207 (-)
LOC122328474 LOC107551551,LOC107666518,LOC107727032,LOC107705685,LOC107681407,LOC107559858 coding upstream 26936 7008897 ~ 7060251 (-)
sox18 sox18,LOC107727030,LOC107681403,LOC107705673,LOC107551552,LOC107666636,LOC107579252 coding upstream 106216 7088177 ~ 7091244 (-)
rgs19 rgs19,LOC107727031,LOC107666537,LOC107681401,LOC107551553,LOC107705684 coding upstream 328609 7310570 ~ 7342699 (-)
npbwr2b npbwr2,LOC107558229,LOC107727007,LOC571123,LOC107559472,LOC107705671,LOC108410549,LOC107666655 coding upstream 540103 7522064 ~ 7525501 (-)
kif3b kif3b,LOC107690851,LOC107558233,LOC107559485,LOC107681362 coding upstream 792340 7774301 ~ 7782717 (-)
G155578 NA non-coding downstream 126176 6837129 ~ 6838566 (-)
G155508 NA non-coding downstream 129153 6835375 ~ 6835589 (-)
LOC122328996 NA non-coding downstream 159823 6794103 ~ 6804919 (-)
G155443 NA non-coding downstream 339474 6624419 ~ 6625268 (-)
G155435 NA non-coding downstream 352218 6611993 ~ 6612524 (-)
G155597 NA non-coding upstream 118347 7100308 ~ 7106154 (-)
G155605 NA non-coding upstream 138442 7120403 ~ 7301136 (-)
G155606 NA non-coding upstream 140968 7122929 ~ 7124586 (-)
G155607 NA non-coding upstream 142867 7124828 ~ 7305564 (-)
G155620 NA non-coding upstream 419020 7400981 ~ 7401192 (-)
ccm2l ccm2l,LOC107666505,LOC107551511 other downstream 97442 6858007 ~ 6867300 (-)
rps21 rps21,LOC107666483,LOC107681394,LOC106572905 other downstream 141710 6766608 ~ 6823032 (-)
G155489 LOC107681366,LOC107727023,LOC107705691 other downstream 232856 6730851 ~ 6731886 (-)
LOC122329188 LOC107709248,LOC107687290,LOC107558915,LOC107671882,LOC107572785,LOC107723742,LOC107701749,LOC107549048,LOC107756350 other downstream 1468268 5484212 ~ 5496474 (-)
LOC122329286 nav1b,LOC107666060,LOC107595432,LOC107740254,LOC107696445,LOC107587625 other downstream 1484920 5477841 ~ 5479822 (-)
LOC122329304 ccm2l,LOC107666505,LOC107551511 other upstream 12206 6994167 ~ 7003523 (-)
G155596 sox18,LOC107727030,LOC107681403,LOC107551552,LOC107666636,LOC107705673,LOC107571663 other upstream 294487 7276448 ~ 7278323 (-)
G155807 NA other upstream 1563433 8545394 ~ 8551977 (-)
G155827 NA other upstream 1643797 8625758 ~ 8628391 (-)
c23h1orf127 LOC107708840,LOC107570680 other upstream 1931101 8913062 ~ 8919770 (-)

Expression


Co-expression Network