G155597


Basic Information

Item Value
gene id G155597
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 7100308 ~ 7106154 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU230405
AGTTATACTACCGTCCTCTAGGGGCTCTAGGGGGAATAAAATCTCTAATTGTGGGGcagtagagagagagatttgtttGGAAGAAGCATGGTCTGCTCCccatgtatctttttttttgtggtaaagaGTTCTGTTTGGGAAGCCTTAACATTTGAAGCCCTATCACCAAGGACTTTTGGGATTTGGCCTTTTTGTGCTGCTAAGGGGGCCATTGAGGACATATGAAGGGAGGTTTCACAGCGGTATCTGAACTTGATGGACACAATTGATGAACTTTTATCGTCTGGAGGTTGGACTCAAACCTGATGGTTACTAAGCTGTGAACTTTTGGACATTATCAAGCCTCATCAAGGttatcatcatcgtcatcattcAACTACAGCTTCTGATTTGATAAGTATCAGAGACATTTATGAAAAGACCTTGAATGCTGTTGGTCTATATGCAAACTTAATCATTTGTGTAGTGTTTGATTATGGCATGTTAAAAAATTACACGATCTTGGGTATTCTTATGATGTTATGGTTTCTTTTGTAGCTATGGTTCACCTATGGAAGTTTGTACTTATTTAAGGTGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230405 True 578 lncRNA 0.39 2 7100308 7106154

Neighbor

gene id symbol gene type direction distance location
sox18 sox18,LOC107727030,LOC107681403,LOC107705673,LOC107551552,LOC107666636,LOC107579252 coding downstream 9064 7088177 ~ 7091244 (-)
LOC122328474 LOC107551551,LOC107666518,LOC107727032,LOC107705685,LOC107681407,LOC107559858 coding downstream 40057 7008897 ~ 7060251 (-)
LOC122328429 xkr7,LOC107551551,LOC107666518,LOC107681407,LOC107559858,LOC107705685,LOC107727032,LOC108435212 coding downstream 173892 6871977 ~ 6926416 (-)
cables2b cables2b,LOC107681405,LOC107705686,LOC107551510,LOC107559848,LOC107726996 coding downstream 242843 6838807 ~ 6857465 (-)
acss2 acss2,LOC107681393,LOC107551550,LOC107666475,LOC107559859 coding downstream 280465 6805369 ~ 6819843 (-)
rgs19 rgs19,LOC107727031,LOC107666537,LOC107681401,LOC107551553,LOC107705684 coding upstream 204416 7310570 ~ 7342699 (-)
npbwr2b npbwr2,LOC107558229,LOC107727007,LOC571123,LOC107559472,LOC107705671,LOC108410549,LOC107666655 coding upstream 415910 7522064 ~ 7525501 (-)
kif3b kif3b,LOC107690851,LOC107558233,LOC107559485,LOC107681362 coding upstream 668147 7774301 ~ 7782717 (-)
LOC122328356 pofut1,LOC107707748,LOC107681402,LOC107558235,LOC107747492,LOC107690856 coding upstream 678151 7784305 ~ 7788287 (-)
LOC122328712 kif3b,LOC107593268,LOC107721442,LOC107690993,LOC107697206,LOC107719402,LOC107690851,LOC107559485 coding upstream 715968 7822122 ~ 7832584 (-)
G155586 NA non-coding downstream 32484 6929686 ~ 7067824 (-)
G155578 NA non-coding downstream 261742 6837129 ~ 6838566 (-)
G155508 NA non-coding downstream 264719 6835375 ~ 6835589 (-)
LOC122328996 NA non-coding downstream 295389 6794103 ~ 6804919 (-)
G155443 NA non-coding downstream 475040 6624419 ~ 6625268 (-)
G155605 NA non-coding upstream 14249 7120403 ~ 7301136 (-)
G155606 NA non-coding upstream 16775 7122929 ~ 7124586 (-)
G155607 NA non-coding upstream 18674 7124828 ~ 7305564 (-)
G155620 NA non-coding upstream 294827 7400981 ~ 7401192 (-)
G155623 NA non-coding upstream 353377 7459531 ~ 7459780 (-)
LOC122329304 ccm2l,LOC107666505,LOC107551511 other downstream 96785 6994167 ~ 7003523 (-)
LOC122328436 cables2b,LOC107681405,LOC107705686,LOC107551510,LOC107559848,LOC107726996,LOC107666605 other downstream 118347 6964742 ~ 6981961 (-)
ccm2l ccm2l,LOC107666505,LOC107551511 other downstream 233008 6858007 ~ 6867300 (-)
rps21 rps21,LOC107666483,LOC107681394,LOC106572905 other downstream 277276 6766608 ~ 6823032 (-)
G155489 LOC107681366,LOC107727023,LOC107705691 other downstream 368422 6730851 ~ 6731886 (-)
G155596 sox18,LOC107727030,LOC107681403,LOC107551552,LOC107666636,LOC107705673,LOC107571663 other upstream 170294 7276448 ~ 7278323 (-)
G155807 NA other upstream 1439240 8545394 ~ 8551977 (-)
G155827 NA other upstream 1519604 8625758 ~ 8628391 (-)
c23h1orf127 LOC107708840,LOC107570680 other upstream 1806908 8913062 ~ 8919770 (-)
sst6 LOC107681964,LOC107571825,LOC107695779,LOC107570713,LOC107681961 other upstream 1815410 8921564 ~ 8926751 (-)

Expression


Co-expression Network