G155628


Basic Information

Item Value
gene id G155628
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 7482027 ~ 7482492 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU230450
TATATCGTACCTACGGGCAAATGAGTGGAAACACAAGGTACTTACCTTTAGCGTATCTACATGgtaaaaaacaagaaacacgGCTGTGGTAACAAACAAGACACACACTGTATATGGTATATATGTGATTAATATGCAGTACTTGTAAACAAGTGATGTTAAATTGCTCTCCACAACAGTGTTTGCAAAGTTTGAGAATTGGTAATTACTGTGTAATATTTGTGCATCGGTATTGAtcgtccactttagacattctgctcACAAGTACCTTTGCTACTACTTTATGCCTAACATTTACTAACAATTGTAATGATTCCCAGTATGGATGAGCTGATCTGATAGTCAGTATCGGTATCGGTTCCAATACCGTCATTTTCTTATAGATTGGGTATCGGTCAGATGAGAACTATTTATATCTGATATTCTAGATATACTATTCTGTTTATTAAACTCAATGAAATGcaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230450 True 466 lncRNA 0.35 1 7482027 7482492

Neighbor

gene id symbol gene type direction distance location
rgs19 rgs19,LOC107727031,LOC107666537,LOC107681401,LOC107551553,LOC107705684 coding downstream 139328 7310570 ~ 7342699 (-)
sox18 sox18,LOC107727030,LOC107681403,LOC107705673,LOC107551552,LOC107666636,LOC107579252 coding downstream 390783 7088177 ~ 7091244 (-)
LOC122328474 LOC107551551,LOC107666518,LOC107727032,LOC107705685,LOC107681407,LOC107559858 coding downstream 421776 7008897 ~ 7060251 (-)
LOC122328429 xkr7,LOC107551551,LOC107666518,LOC107681407,LOC107559858,LOC107705685,LOC107727032,LOC108435212 coding downstream 555611 6871977 ~ 6926416 (-)
cables2b cables2b,LOC107681405,LOC107705686,LOC107551510,LOC107559848,LOC107726996 coding downstream 624562 6838807 ~ 6857465 (-)
npbwr2b npbwr2,LOC107558229,LOC107727007,LOC571123,LOC107559472,LOC107705671,LOC108410549,LOC107666655 coding upstream 39572 7522064 ~ 7525501 (-)
kif3b kif3b,LOC107690851,LOC107558233,LOC107559485,LOC107681362 coding upstream 291809 7774301 ~ 7782717 (-)
LOC122328356 pofut1,LOC107707748,LOC107681402,LOC107558235,LOC107747492,LOC107690856 coding upstream 301813 7784305 ~ 7788287 (-)
LOC122328712 kif3b,LOC107593268,LOC107721442,LOC107690993,LOC107697206,LOC107719402,LOC107690851,LOC107559485 coding upstream 339630 7822122 ~ 7832584 (-)
LOC122328943 kif3b,LOC107690851,LOC107558233,LOC107559485,LOC107681362 coding upstream 371812 7854304 ~ 7861354 (-)
G155627 oprl1,LOC107705672,LOC107681404,LOC107666560,LOC107727003,LOC107559467 non-coding downstream 1457 7479495 ~ 7480570 (-)
G155624 NA non-coding downstream 20725 7460929 ~ 7461302 (-)
G155623 NA non-coding downstream 22247 7459531 ~ 7459780 (-)
G155620 NA non-coding downstream 80835 7400981 ~ 7401192 (-)
G155607 NA non-coding downstream 176463 7124828 ~ 7305564 (-)
G155629 NA non-coding upstream 1431 7483923 ~ 7484205 (-)
G155670 LOC102294427,LOC107690852,LOC107681385,LOC108440950,LOC107559486,LOC100536777,LOC107747485 non-coding upstream 283756 7766248 ~ 7817371 (-)
G155669 LOC107747485,LOC107707759,LOC107559486,LOC107690852,LOC107558232,LOC100536777,LOC107681385,LOC108440950 non-coding upstream 337254 7819746 ~ 7852251 (-)
G155684 NA non-coding upstream 352070 7834562 ~ 7836538 (-)
G155698 NA non-coding upstream 490611 7973103 ~ 7973325 (-)
G155596 sox18,LOC107727030,LOC107681403,LOC107551552,LOC107666636,LOC107705673,LOC107571663 other downstream 203704 7276448 ~ 7278323 (-)
LOC122329304 ccm2l,LOC107666505,LOC107551511 other downstream 478504 6994167 ~ 7003523 (-)
LOC122328436 cables2b,LOC107681405,LOC107705686,LOC107551510,LOC107559848,LOC107726996,LOC107666605 other downstream 500066 6964742 ~ 6981961 (-)
ccm2l ccm2l,LOC107666505,LOC107551511 other downstream 614727 6858007 ~ 6867300 (-)
rps21 rps21,LOC107666483,LOC107681394,LOC106572905 other downstream 658995 6766608 ~ 6823032 (-)
G155807 NA other upstream 1062902 8545394 ~ 8551977 (-)
G155827 NA other upstream 1143266 8625758 ~ 8628391 (-)
c23h1orf127 LOC107708840,LOC107570680 other upstream 1430570 8913062 ~ 8919770 (-)
sst6 LOC107681964,LOC107571825,LOC107695779,LOC107570713,LOC107681961 other upstream 1439072 8921564 ~ 8926751 (-)
ctnnbip1 ctnnbip1 other upstream 1597040 9079532 ~ 9097302 (-)

Expression


Co-expression Network