G155670 (LOC102294427,LOC107690852,LOC107681385,LOC108440950,LOC107559486,LOC100536777,LOC107747485)


Basic Information

Item Value
gene id G155670
gene name LOC102294427,LOC107690852,LOC107681385,LOC108440950,LOC107559486,LOC100536777,LOC107747485
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 7766248 ~ 7817371 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU230545
CCAGTATAAGGCCCACCATGGTGCTGAGATAACCCGTCCCGCTGCCCAGATTGAGAAAAGACAGGCCAGGCTGCAGATCCAGGGCCTCCATCACCTCAGAGTAGATGCACGGAGCAGACAGATGGAGGTTTCCATGTCTCCAGGCCAGGTCTTTATACGCACTGTCACGGTACTCCTCCAGGTAATAGTCTGCTCTGTCAATGGCTCGGAAGGCCCTCTCCACCAGATCCGAGCGGATGTAATGGGCCTCCTTCAGGTTGTCAATCAGCTCGTCGTTGTCCTCGCCTGCGCTCACGGCTCCACCCATGACCAAAACAGAAGAGCTTCTAAGACCGGTCCCGATGCGCGCCTATCGCTGTCTGGAGGGGGAAACGCAAAGCATCTCGGATCAAACCCGGAGTAAGTTGACGCTAAAGCGATATTGAGCTTTGTACcatttataaacaaacacagaatgtgacatattaaataacaaacacGAAGATCACCTAATCGATACCTAATTACCTAAGACCTAAACACgtatgcattaataataatcaaacagTTTTAggattatgttttatttagtcgTAAATGACACCTGCAACAGACTCCTGCGCCTAGCAGGTGGGAAGAAAGCAAAGAATGATAATTAAGACAGTTAAATCTTTAATGAGACGCAGCATGGCGGATATCTGAGTACGCCAACTAACTTGACAATAAGACTCACGCTTGCCTTCAGCTCCTTCCCTCACACTCTATTTTTAGAGGTCAGACAAAGCCCAGTAAAAAGTGGCACACTGTTGCGTCCCGACCTGAACTCTAGGCAgcaacttttgtttgtttgtcactTTGGCAGGGAGACGAAGAGCACACGGGCAGCTGACGCGTTATATATCTATGGACTTNCAaaaaaaaaattttggataaaaatttagataaatgcatttattggtGCCGTTACGGTTTATCATTTCTTGTACGTTTTGTACAATTTCAACCATTTTATTCAGTACTTTTCATCTTATCCCATggttatttgataaataaagttCGTTCGAAAtagttttaaaagaacatttatttgaaatgtaaatattgtgtaaCTTCACTAATGTCTTTTCGGTCACTTCTGCTCAATTATCGAGTCCTTTTTTGAGTTATTCAGCAGTTATTATTAGTCTGCTGAATAAAACCTACCCCAAAATTTGTTGCATTTGTGCtacatttaatattcaaagGTACTGTTATTAATGCGTTATGAATaagacataaaacaataagTAAGGTAAATCATGATCTCAGCACGTGCAAACATTATGAATTTGTAAACCGCAGGAAACTTTAATAAATACCTGACTGATTAATAACATAAATTTGCAAAATTTAGAGTActattacaataaattaaacaaaacaacagtaaaaacaaatatgacttTAGCCTTTCCCTCTCGAACTACTTGATGGCAAATAACCTAATGTTACCTCATTGTTTGCAACTTTTAGTCTGATTGAGCAACTTGGTAATTATTGACTCCatctttcattattattattatattttttacttttttgtttcaaCTGGGCTATCAATGgagtgcaataaataaatatgagctTTTAATGATGCATGCGTAGCAATTACGAAATAGCATTGTTcggtattattttgtttaaaaatatatagattttaacaaaacaataacgCAAACATGTCTGATAAGACAGAATTATAAGTCAAATGAAGTAACAAAAGCAACGACTAAAATATCAGGAATGCAAAATGGTGGGCTGTTCGCTTCTTTTAGTTGCCAGATAAGTTTCAATGGGACTGTAAAATCTCGCCATACAATTGCATTACATCACAAAGTCAGTTTCTTTGTCATTTAATCTAACAATTGAAATCGTAACAAACAACCGTGCAGCATGTGACACCACAGCACTGTGTTTGACACATGGAAGCGATCGTCGCATTCAGCGAAACAGTAGCAAAGCAAtcgcaaaacaacaacaacaacaacaacacatctGTAAAACACAGAGCAGCGACAAAACGCAAACGTGTTCGCGCAAAAACGACGCGCGGCTTCTACGCGCCGTAACCCAGTAACCGTCACATGTAGGTCACGTctgtattatacatttaacGACAGTTAGCTGCAGTCGGTCCGCGCACGAGGAGAAGCTTTGCACGGCCACCGACATAAACAAAAGGGTCTCCGCCACACTGGCACTCACTGCCGCCCCGCCGTCTACATCTCACCGTGTGATCTCGGACCTCAGCGGTTGTCTCGTCCAAACCAGCAATGTCCATCGATCACATCAACGCGCACGTCGTGTTTTTGGCTCCGGGCGCAATAAGGTCTAACTTGACTGCGAAAAAATTGACGCGATGTAAACATAAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC102294427

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230545 True 2390 lncRNA 0.41 2 7766248 7817371

Neighbor

gene id symbol gene type direction distance location
npbwr2b npbwr2,LOC107558229,LOC107727007,LOC571123,LOC107559472,LOC107705671,LOC108410549,LOC107666655 coding downstream 240747 7522064 ~ 7525501 (-)
rgs19 rgs19,LOC107727031,LOC107666537,LOC107681401,LOC107551553,LOC107705684 coding downstream 423549 7310570 ~ 7342699 (-)
sox18 sox18,LOC107727030,LOC107681403,LOC107705673,LOC107551552,LOC107666636,LOC107579252 coding downstream 675004 7088177 ~ 7091244 (-)
LOC122328474 LOC107551551,LOC107666518,LOC107727032,LOC107705685,LOC107681407,LOC107559858 coding downstream 705997 7008897 ~ 7060251 (-)
LOC122328429 xkr7,LOC107551551,LOC107666518,LOC107681407,LOC107559858,LOC107705685,LOC107727032,LOC108435212 coding downstream 839832 6871977 ~ 6926416 (-)
LOC122328712 kif3b,LOC107593268,LOC107721442,LOC107690993,LOC107697206,LOC107719402,LOC107690851,LOC107559485 coding upstream 4751 7822122 ~ 7832584 (-)
LOC122328943 kif3b,LOC107690851,LOC107558233,LOC107559485,LOC107681362 coding upstream 36933 7854304 ~ 7861354 (-)
LOC122328942 pofut1,LOC107707748,LOC107681402,LOC107558235,LOC107747492,LOC107690856 coding upstream 44832 7862203 ~ 7866387 (-)
tm9sf4 tm9sf4,LOC107681873,LOC107690854 coding upstream 104882 7922253 ~ 7932104 (-)
LOC122329207 hck,LOC107681869,LOC107707747,LOC107690859,LOC107747493 coding upstream 115072 7932443 ~ 7954995 (-)
G155629 NA non-coding downstream 282043 7483923 ~ 7484205 (-)
G155628 NA non-coding downstream 283756 7482027 ~ 7482492 (-)
G155627 oprl1,LOC107705672,LOC107681404,LOC107666560,LOC107727003,LOC107559467 non-coding downstream 285678 7479495 ~ 7480570 (-)
G155624 NA non-coding downstream 304946 7460929 ~ 7461302 (-)
G155623 NA non-coding downstream 306468 7459531 ~ 7459780 (-)
G155669 LOC107747485,LOC107707759,LOC107559486,LOC107690852,LOC107558232,LOC100536777,LOC107681385,LOC108440950 non-coding upstream 2375 7819746 ~ 7852251 (-)
G155684 NA non-coding upstream 17191 7834562 ~ 7836538 (-)
G155698 NA non-coding upstream 155732 7973103 ~ 7973325 (-)
G155737 NA non-coding upstream 359328 8176699 ~ 8177518 (-)
G155759 NA non-coding upstream 489908 8307279 ~ 8382607 (-)
G155596 sox18,LOC107727030,LOC107681403,LOC107551552,LOC107666636,LOC107705673,LOC107571663 other downstream 487925 7276448 ~ 7278323 (-)
LOC122329304 ccm2l,LOC107666505,LOC107551511 other downstream 762725 6994167 ~ 7003523 (-)
LOC122328436 cables2b,LOC107681405,LOC107705686,LOC107551510,LOC107559848,LOC107726996,LOC107666605 other downstream 784287 6964742 ~ 6981961 (-)
ccm2l ccm2l,LOC107666505,LOC107551511 other downstream 898948 6858007 ~ 6867300 (-)
rps21 rps21,LOC107666483,LOC107681394,LOC106572905 other downstream 943216 6766608 ~ 6823032 (-)
G155807 NA other upstream 728023 8545394 ~ 8551977 (-)
G155827 NA other upstream 808387 8625758 ~ 8628391 (-)
c23h1orf127 LOC107708840,LOC107570680 other upstream 1095691 8913062 ~ 8919770 (-)
sst6 LOC107681964,LOC107571825,LOC107695779,LOC107570713,LOC107681961 other upstream 1104193 8921564 ~ 8926751 (-)
ctnnbip1 ctnnbip1 other upstream 1262161 9079532 ~ 9097302 (-)

Expression


Co-expression Network