G155756 (LOC107563058)


Basic Information

Item Value
gene id G155756
gene name LOC107563058
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 8408166 ~ 8410045 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU230693
ctgggttttgttggtgggcctcggggTCTCCTGGACCGCGGCGATTTTGctctcctgtggccggatcagtcctctcccaactcggtaacccaggtacttcgcttcgaagagcgccaggtgacatttcttggggttggcggtgagtccagcccgtcgaagatcgcgaagcaccctccgcaggcgctccagatggtcctcccagtcgcgtttgtcctcggagacaacccttctcaacatttgcttcagtgtctggttgaaccgctccacaagtccgtccgtctgggggtggtacactgaggtgcgcagctgctggatccgtagcaaccggcagaggtcggccatcacccgggacatgaacggggtgccttggtcggtcagtatctccccgggtatccccactctggtggacagggtgaagagctcctgggcgatcgccttggcggtggctttgcggagtgggatggcttcggggtaccgggtggcgtagtccacgatcaccaggatgtgttcgtggccgcgggcagacctcggcagcgggcccaccagatccatcccgatgcgctcgaagggcacctcgattatgggcagcgggataagtggactagggggaggtggccggggcgaggtcttctggcactctgggcaggcctggcagaaaaGTTTCACGTCTCCGTCgagccccggccagtggaaacggtcccggatcctcttgatagtgttggcggccccgaggtgtccgg

Function

NR:

description
PREDICTED: uncharacterized protein LOC107563058

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230693 True 740 lncRNA 0.63 2 8408166 8410045

Neighbor

gene id symbol gene type direction distance location
LOC122329212 LOC107732057,LOC107718040,LOC107555247,LOC107677163,LOC107599733,LOC107667194 coding upstream 54256 8351800 ~ 8353910 (+)
LOC122328648 abcd4,LOC107667197,LOC107677172 coding upstream 66387 8334954 ~ 8341779 (+)
LOC122329211 ccdc178,LOC107555255,LOC107667113,LOC107599731 coding upstream 100402 8281226 ~ 8307764 (+)
ntsr1 ntsr1,LOC107559468,LOC107747990,LOC107707740,LOC107671946,LOC107657007,LOC107603109 coding upstream 232647 8156193 ~ 8175519 (+)
slco4a1 slco4a1,LOC107603147,LOC107681874,LOC107559480,LOC107657069,LOC107707756 coding upstream 275215 8114941 ~ 8132951 (+)
pex14 pex14,LOC107681981,LOC107708844,LOC107716227,LOC107586529,LOC107695784 coding downstream 219159 8629204 ~ 8689833 (+)
tardbpa tardbpl,tardbp,LOC107570713,LOC107681961,LOC107695779,LOC107716231,LOC107586522,LOC107708842 coding downstream 509674 8919719 ~ 8924271 (+)
aurkaip1 LOC107695745,LOC107571831,LOC107708787,LOC107681958,LOC107578281,LOC107718821 coding downstream 734975 9145020 ~ 9147322 (+)
mxra8b LOC107708825,LOC107681995,LOC107570868,LOC107718822 coding downstream 737878 9147923 ~ 9155012 (+)
dvl1a dvl1a,LOC107708824,LOC107570850 coding downstream 746449 9156494 ~ 9186875 (+)
LOC122328539 NA non-coding upstream 331846 8054337 ~ 8076320 (+)
G155704 NA non-coding upstream 370903 8036903 ~ 8037263 (+)
G155701 gata5,LOC107681871,LOC107603108,LOC107559469,LOC107747495,LOC107707745 non-coding upstream 422580 7984095 ~ 7985586 (+)
G155660 NA non-coding upstream 468410 7938606 ~ 7939756 (+)
G155655 tm9sf4,LOC107681873 non-coding upstream 476110 7929733 ~ 7932056 (+)
G155813 NA non-coding downstream 203369 8613414 ~ 8617005 (+)
G155823 NA non-coding downstream 214085 8624130 ~ 8624789 (+)
G155824 NA non-coding downstream 214860 8624905 ~ 8625636 (+)
G155829 NA non-coding downstream 218748 8628793 ~ 8629065 (+)
G155830 NA non-coding downstream 280840 8690885 ~ 8691100 (+)
LOC122328506 klhl14,LOC107677170,LOC107599684,LOC107554641,LOC107717384 other upstream 74790 8321705 ~ 8333376 (+)
tcea2 tcea2,LOC107681409,LOC107551521,LOC107705683,LOC107571665,LOC107666524 other upstream 1102632 7298360 ~ 7305534 (+)
G155561 NA other upstream 1169247 7225994 ~ 7238919 (+)
si:ch211-220i18.4 LOC107551506,LOC107666586,LOC107559855,LOC107681367,LOC107705652,LOC108275527,LOC107100285 other upstream 1809634 6592602 ~ 6598532 (+)
LOC122328459 g6pd,LOC107723128,LOC107697003,LOC107594489 other upstream 3572682 4817365 ~ 4835484 (+)
G155799 NA other downstream 78041 8488086 ~ 8488641 (+)
lzic lzic,LOC107708836,LOC107718820,LOC107681991,LOC107570802,LOC107695771,LOC107586557 other downstream 530986 8941031 ~ 9101372 (+)
G155927 zgc:194189,LOC107570831,LOC107708788,LOC107681978,LOC107695725,LOC107586555,LOC107718823 other downstream 710839 9120884 ~ 9122393 (+)
G156081 phip,LOC107656532,LOC107708770,LOC107549027 other downstream 1273701 9683746 ~ 9769620 (+)
plagx plagx,LOC107723745,LOC107572778,LOC107756402,LOC107671865,LOC107549050,LOC107701746 other downstream 1660735 10070780 ~ 10089818 (+)

Expression


Co-expression Network