G155860 (slc25a33,LOC107695765,LOC107708828,LOC107681985)


Basic Information

Item Value
gene id G155860
gene name slc25a33,LOC107695765,LOC107708828,LOC107681985
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 9135416 ~ 9138190 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU230837
AGGCTTGAAAAGGTCTATTTATTAATGTGGCTCATTATTTCTGTGCAtttccaacaacaaaaaaaataacttccataatttattttattaaaccaaCAGCAGCATATGCATCAAGGCCCTCATTTTCTGCAAAAGATGAACAACTTAACATACAGTAAACAGATTATAGGTTTCTAGTGAAGAGGTGAATGGAATTGATTGGTCAGATTCCAGTGCTACTAGTTGTCATGAAGCAGGaaagtgttacaaaatattGCAACGTGAGCTTATCAGCTAATAGCGTATTCTACGCCCCCATTACAGTATCATTTGAATTCCTTCCAAGAACTTCATAATAAAACCCGGATCCAATAATGATTAACTCCAAAACTCCTGGACAAGTACCGTACCGTAGAGTTcaacagactgaaaaaaaaaaaaaaacaacccaatgCTGCTACTTATAATAGGAATAATTTAGTTAACTTAAAGCACTATTTGTATATTCGGATGACTTTTTGCTGTACACTGATACAGTATACACAAACATCTAGGAGTAGCTATGCAATATGCGCCATTTACATAACACATAAACAAGCAAAACAGTTCTGATAGCATATGCAGTCAacgcaaaataataataaaaaaaaaaaaaagccgttTAATGTCTTTGGgtaattcaaataaacatcCCTGTTCACAATGGATTCTTTTCTGTCCACTTTAGCTGCAGGTCAAAAGTATCTTTGTGCTTGTAGTGTTCAGCTTCATTTGGAGGGTTCACCCAACAGATGGACAATGAGCTCATAGGTGGACAGCACTATGGCTGTGTTGGGGATCTGTCTGATGAGCTGTGGAATGAGTCCTCTGTAAAAAGCTGCGTATCCCTCTTCCACCGCCACAAGGCGCGCCGTCTGAAAGAAGTACTTGTATTTGCTTCCTTCTTCTCTTAGTCGTGTCCGAATGACCTCTGGAAAACACACCATGAAAGGTCCATGTGGATAAGCTATGCAGGAGGCGCAACCCTTGGCAAATGCAGCAGCAACCATGAGGCCCAGGAAATCTGAAGCGCCcttttctgtgtctgtgtcaggCGTGGTGAATCGACTCTGCGCTAGGTACTTCTTCAGCGTCTCGTAAATGAGGAAGCAGATCATGGTCTCCGAGATGCCAGCATACGACGCGGTCAGGCCCCGGTAAAAACCTCGCATACCTTCCGTTTTATACACGTACCGCGCACATTGTAACGCATTCATTTTCTTCTCCCCACGTGCCCTGGAGGACAAAGAAACAGTCGGTCAGTTAATCAGGAAGAAGTGGATAACAAAAGGTCAACACGATTAACTCTGAGATGGGATTCATCAGGGAGTTTGTGACGAAtgctgtgaggaaaaaaaaacaatgcaattagGAATTCAATCAGTTACTTTTCTTGGAAAGCATCTTGGAAAACAAGTTCTGGGAAACGTTATCAGCAATGTTGCATAAACGTTAAGGCATCACCTGCAAAGCCAGCCGAGGACATGTGGACAATTCCACTGTTTGGGACAAAGATTCCATTGAAAGTCTCTTTCGACTTTGAATAAGCTGCAAAATAGATCGCCCTGAAGAAGAACAGAAGGAGAACAGACTATCAGTGTCTTGACTCTGTTAAACTCTACACCCCCTGCTTCCTCTCTTCACGCATGACAGTGCagagttcattttaatatgaaaaaggGCTGTTCGCACTGAAAAGCTGCCAATGTTTTATCAAGCCAAACAGCTTGAAGTGAGATTTCCTGACAGCGCAGTCGGTTCTATGTACTGAATGTCTGGAACAAACTGCACAAAGAGCTGAATAAGCACCCAGATCTACTGTCATCATGACTGTGGGAAACAATGGctgcgtttttttttacagaacaagTACATCCTAGTGgactgaaggaaaaaaaaattctagctTGTTGAAAActttgcatgtaaatgtaatttagaaAGCTAACATGAGAAAATGTATGGCTATTGTTCccgagggggaaaaaa

Function

symbol description
slc25a33 Predicted to enable pyrimidine nucleotide transmembrane transporter activity. Predicted to be involved in pyrimidine nucleotide import into mitochondrion. Predicted to act upstream of or within transmembrane transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Is expressed in margin; myotome; and pharyngeal arch 3-7 skeleton. Orthologous to human SLC25A33 (solute carrier family 25 member 33).

NR:

description
PREDICTED: solute carrier family 25 member 33

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230837 True 2007 lncRNA 0.41 3 9135416 9138190

Neighbor

gene id symbol gene type direction distance location
tardbpa tardbpl,tardbp,LOC107570713,LOC107681961,LOC107695779,LOC107716231,LOC107586522,LOC107708842 coding upstream 211145 8919719 ~ 8924271 (+)
pex14 pex14,LOC107681981,LOC107708844,LOC107716227,LOC107586529,LOC107695784 coding upstream 445583 8629204 ~ 8689833 (+)
LOC122329212 LOC107732057,LOC107718040,LOC107555247,LOC107677163,LOC107599733,LOC107667194 coding upstream 781506 8351800 ~ 8353910 (+)
LOC122328648 abcd4,LOC107667197,LOC107677172 coding upstream 793637 8334954 ~ 8341779 (+)
LOC122329211 ccdc178,LOC107555255,LOC107667113,LOC107599731 coding upstream 827652 8281226 ~ 8307764 (+)
aurkaip1 LOC107695745,LOC107571831,LOC107708787,LOC107681958,LOC107578281,LOC107718821 coding downstream 6830 9145020 ~ 9147322 (+)
mxra8b LOC107708825,LOC107681995,LOC107570868,LOC107718822 coding downstream 9733 9147923 ~ 9155012 (+)
dvl1a dvl1a,LOC107708824,LOC107570850 coding downstream 18304 9156494 ~ 9186875 (+)
tnfrsf9a LOC107708826,LOC107656554 coding downstream 51184 9189374 ~ 9193433 (+)
uts2a LOC107571861,LOC107708786,LOC107656544,LOC107695762,LOC107718818 coding downstream 73196 9211386 ~ 9212859 (+)
G155868 tmem201 non-coding upstream 4341 9128700 ~ 9131075 (+)
G155894 ube4b non-coding upstream 128678 9005042 ~ 9006738 (+)
G155850 kif1b,LOC107681965,LOC107586520 non-coding upstream 195710 8821438 ~ 8939706 (+)
G155851 NA non-coding upstream 203567 8929744 ~ 8931849 (+)
LOC122328608 NA non-coding upstream 434594 8698178 ~ 8700822 (+)
G155984 NA non-coding downstream 74965 9213155 ~ 9213707 (+)
G155985 NA non-coding downstream 75950 9214140 ~ 9214454 (+)
G156034 NA non-coding downstream 445979 9584169 ~ 9584580 (+)
G156047 NA non-coding downstream 484289 9622479 ~ 9639826 (+)
G156096 NA non-coding downstream 664506 9802696 ~ 9808280 (+)
G155927 zgc:194189,LOC107570831,LOC107708788,LOC107681978,LOC107695725,LOC107586555,LOC107718823 other upstream 13023 9120884 ~ 9122393 (+)
lzic lzic,LOC107708836,LOC107718820,LOC107681991,LOC107570802,LOC107695771,LOC107586557 other upstream 34044 8941031 ~ 9101372 (+)
G155799 NA other upstream 646775 8488086 ~ 8488641 (+)
LOC122328506 klhl14,LOC107677170,LOC107599684,LOC107554641,LOC107717384 other upstream 802040 8321705 ~ 8333376 (+)
tcea2 tcea2,LOC107681409,LOC107551521,LOC107705683,LOC107571665,LOC107666524 other upstream 1829882 7298360 ~ 7305534 (+)
G156081 phip,LOC107656532,LOC107708770,LOC107549027 other downstream 545556 9683746 ~ 9769620 (+)
plagx plagx,LOC107723745,LOC107572778,LOC107756402,LOC107671865,LOC107549050,LOC107701746 other downstream 932590 10070780 ~ 10089818 (+)
LOC122328781 pifo other downstream 1191661 10329851 ~ 10363818 (+)
LOC122328383 tbx15,tbx18,LOC107712261,LOC107708785,LOC107656541 other downstream 1277473 10415663 ~ 10427162 (+)
LOC122328447 LOC107603155,LOC107707751,LOC107672009 other downstream 1376789 10514979 ~ 10518751 (+)

Expression


Co-expression Network