G156047


Basic Information

Item Value
gene id G156047
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 9622479 ~ 9639826 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU231094
ttctgttatgtttAATTAGATCTTCTTTATCCATGACATTGATCAGTTCACATTTTAGGtcaaattaatgcaaaacaagAGGGAATATTTCACAAGCGTTCTCATCATTAAACATATGCCAGAAGCTAAAGCTTCTCCCAAatgtttttctcagaaaattTGGACTGATGCTTGTCAATTCCCTTTAGACAGAGAAGAGCGAACTGAAATTGAATTAGTGAGGTCTcgtatatattattaatattgctagGTTAGAAATGAGCAGATTTATAAGACAGTATAAGTGCATTTCATGTGGTCTATACAAATGTAGTAAAAAGTCACAAAACGTCATTGTACAATTATGTAAAGCCATCATAGCACCACAGTGGTATAATTTGGGCTTCTATCTGTGAAATGCACAACAGAAACAATCAGTCCCTAGCGTCACGACCAATATCAACAGCTTTTAACACACAATGACTTGAACATATTGAGTGTATGCTTGCTTTACATAGTTGCATTCACTGTGACCacgtttatttgtatattaactTGATGTGATTGCTATAGGAATAGCTAACAAACAGGGCACAAAATCATGAGACAATTGGGgataagatgtttttttaatgtctcatGATTTTAAGGGCTTCAAAAGACTTTACATTAGCAGCTGGTGGAATAATATACTCATACTTCTAACCGCTAGTAAGCATTGATAGTgagattaaataatttatgtttagACATGCCACAATATAGTGTAGAAAATACAGAGGGACATAAATTGTAGttaactttttcatttaaagtatgCCATTGCCCGAAGCTTGGCATTTGGAATTGTACGCACTACATGGAACATATTAAAGATAAATACTCTTGTGCTACACAATAGATGATGAGCTCCCATTAAGTGTAGGTGATAAAGATTTCTCTATATAACAGTGGTTTTAATCACTGCAGTCACATACACCTTTCTCCATCTAACCAATTCTAGGCAAAACAGCCCAAACAGTGTGAAAAACCACCAGCAAAAGCACTAGCATGCTTgaccaaaaaagtattttacataAACAGTGGAGCTTATTGACACATTAAGGTGTACAACTGACAGACATTCCCATCAATGTTTGCATAGCTTCTGAAATTTGTGAGTGTTAAAATCACAGTATTgtttaaagtttcaaaataaaagacagcgGCGTCTTTCGTGATCATCTGAGGTCATCTTGTCTACGATTTGTATGTCTGGAAAACAATTAGTCCTTGCAGAATGAAATTTTCTGTATGGCAAAAAGCATGTGTACAATGAAGCACATTCGGAGCATTTTTggtacatatgtgtgtgtgggcaaAGGTGAAGCACCTTGACATTCGTGAGCCATTaagtgctgaaataaaaaagagattAGCACCCATCTCCATTTCATTCACCAGGATGTATCACTCAACAATGCAGTCCTGACGAGTTATATGGCTTTAGTTTCTACAAGAGAAAAGTCGCTTTGGCAAccataaacacactgaaaacatCAATCCTAATAGGTTTTGTGTTATGTAtacttttttaacaattaaaaaacacatatttcctttttttttttttttttaccaagtaaacctttttttatgagCAGCTTTAATTTTTGTCTGTCAAACTAAAGCAAAACagatctaaaatatatttataaataagagagaaaa

Function

GO:

id name namespace
GO:0008137 NADH dehydrogenase (ubiquinone) activity molecular_function
GO:0003954 NADH dehydrogenase activity molecular_function
GO:0050136 NADH dehydrogenase (quinone) activity molecular_function
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU231094 True 1689 lncRNA 0.34 2 9622479 9639826

Neighbor

gene id symbol gene type direction distance location
cables2a cables2a,LOC107656547,LOC107708813,LOC107756377,LOC107571009,LOC107549038,LOC107701719 coding upstream 6983 9601928 ~ 9615496 (+)
xkr5l zgc:198371,LOC107708814,LOC107656543,LOC107701703,LOC107756376,LOC107571628,LOC107575995 coding upstream 22311 9587075 ~ 9600168 (+)
LOC122329090 LOC107586552,LOC107756359,LOC107701702,LOC556451,LOC108275624 coding upstream 45043 9575293 ~ 9577436 (+)
asxl1 LOC107570968,LOC107656538,LOC107708815,LOC107756373,LOC107701716,LOC107586510 coding upstream 79254 9528724 ~ 9543225 (+)
dnajc11a dnajc11a,LOC107708818,LOC107701714,LOC107756372,LOC107586512,LOC107656549,LOC108433830 coding upstream 96021 9519025 ~ 9526458 (+)
selenoi si:ch211-197l9.4,selenoi,LOC107656545,LOC107708808,LOC107571075,LOC107549067,LOC107701725,LOC107756381 coding downstream 10071 9649897 ~ 9659485 (+)
tbx18 tbx18,LOC107708785,LOC107656541,LOC107756382,LOC107701724 coding downstream 56814 9696640 ~ 9705684 (+)
irak1bp1 irak1bp1,LOC107656539,LOC107708805,LOC107571105,LOC107701704,LOC107549065,LOC107756383 coding downstream 119041 9758867 ~ 9760617 (+)
sh3bgrl2 sh3bgrl2,LOC107671851,LOC107701732,LOC107708803,LOC107571206,LOC106608335 coding downstream 182983 9822809 ~ 9830190 (+)
rps12 rps12,LOC107671850 coding downstream 194498 9834324 ~ 9837182 (+)
G156034 NA non-coding upstream 37899 9584169 ~ 9584580 (+)
G155985 NA non-coding upstream 408025 9214140 ~ 9214454 (+)
G155984 NA non-coding upstream 408772 9213155 ~ 9213707 (+)
G155860 slc25a33,LOC107695765,LOC107708828,LOC107681985 non-coding upstream 484289 9135416 ~ 9138190 (+)
G155868 tmem201 non-coding upstream 491404 9128700 ~ 9131075 (+)
G156096 NA non-coding downstream 162870 9802696 ~ 9808280 (+)
G156098 NA non-coding downstream 173391 9813217 ~ 9815309 (+)
G156109 NA non-coding downstream 240936 9880762 ~ 9973534 (+)
LOC122328703 NA non-coding downstream 245219 9885045 ~ 9888379 (+)
G156108 sgk1 non-coding downstream 282315 9922141 ~ 9923225 (+)
G155927 zgc:194189,LOC107570831,LOC107708788,LOC107681978,LOC107695725,LOC107586555,LOC107718823 other upstream 500086 9120884 ~ 9122393 (+)
lzic lzic,LOC107708836,LOC107718820,LOC107681991,LOC107570802,LOC107695771,LOC107586557 other upstream 521107 8941031 ~ 9101372 (+)
G155799 NA other upstream 1133838 8488086 ~ 8488641 (+)
LOC122328506 klhl14,LOC107677170,LOC107599684,LOC107554641,LOC107717384 other upstream 1289103 8321705 ~ 8333376 (+)
tcea2 tcea2,LOC107681409,LOC107551521,LOC107705683,LOC107571665,LOC107666524 other upstream 2316945 7298360 ~ 7305534 (+)
G156081 phip,LOC107656532,LOC107708770,LOC107549027 other downstream 43920 9683746 ~ 9769620 (+)
plagx plagx,LOC107723745,LOC107572778,LOC107756402,LOC107671865,LOC107549050,LOC107701746 other downstream 430954 10070780 ~ 10089818 (+)
LOC122328781 pifo other downstream 690025 10329851 ~ 10363818 (+)
LOC122328383 tbx15,tbx18,LOC107712261,LOC107708785,LOC107656541 other downstream 775837 10415663 ~ 10427162 (+)
LOC122328447 LOC107603155,LOC107707751,LOC107672009 other downstream 875153 10514979 ~ 10518751 (+)

Expression


Co-expression Network