G156051 (LOC107708813,LOC107656547,LOC107571009,LOC107756377)


Basic Information

Item Value
gene id G156051
gene name LOC107708813,LOC107656547,LOC107571009,LOC107756377
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 9601962 ~ 9602477 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU231104
GCGGGGATCAGGCACGGGATTAGATCCCGGGAATTGGACGAGCGGTTTACTGGATCCTAAAACCGGATTCACCGGTCCAGAGGTCGGTGAAAGCGGGGGTGCCTGGACTGACAAAGGATCTGTTCGACCATCCTCCGTGAAAACGTCGCAGCTCCCCTGATTGAATGCTGGAGGAGGACTGAGAGGAGCGGGGTAAGTGTGAGTCCTCGGTAGAGGGGTCGCTGCTCCCCCGCTGATGGAGGATGACACTTGGGTGAAGGTTCCGTAGCTGCTGGTTGTCGACAGAGGGAAACCCGTTACCGCCGTCGCGGCGACATCCACGCACCGGCTCTCGGCTTCCCTGGGGCCAGAGATTCCATTGCTAAGGTTGTAAACCGGTCTTCCGTCCAAAGATATATTAGTGAGAAACAACAGTGCCGCTTGTCTGCGACGGGAATCCCGGCTTTTTCGCAGGTGTTCTTTGTGTGGTTTGGCTGAATTAGTCCTCGGACAGCCGCGAGGACCGCAGGCAGCGGC

Function

NR:

description
PREDICTED: CDK5 and ABL1 enzyme substrate 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU231104 True 516 lncRNA 0.58 1 9601962 9602477

Neighbor

gene id symbol gene type direction distance location
myt1a myt1a,LOC107756375,LOC107708774,LOC107586511,LOC107571600,LOC107701718 coding downstream 39839 9549124 ~ 9562123 (-)
pcmtd2a pcmtd2,LOC107708816,LOC107570992,LOC107701717,LOC107756374,LOC107656550,LOC108433859 coding downstream 53620 9543486 ~ 9548342 (-)
thap3 LOC107656551,LOC107708819,LOC107570956 coding downstream 73827 9526592 ~ 9528135 (-)
camta1a camta1a,LOC107708820,LOC107570946,LOC107656552 coding downstream 85246 9215785 ~ 9516716 (-)
slc25a33 slc25a33,LOC107708828,LOC107695765,LOC107681985 coding downstream 459642 9135415 ~ 9142320 (-)
LOC122328677 LOC107656548,LOC107756378,LOC107708812,LOC107571042 coding upstream 13056 9615533 ~ 9621872 (-)
osbpl2a osbpl2a,LOC107571031,LOC107708810,LOC107656546,LOC107549069,LOC107756379,LOC107701722,LOC108433898 coding upstream 19976 9622453 ~ 9633367 (-)
LOC122328660 LOC107656533,LOC107571650,LOC107756347,LOC107708771,LOC107549029,LOC107701694,LOC101887148 coding upstream 59936 9662413 ~ 9674637 (-)
si:dkey-261l7.2 si:dkey-261l7.2,LOC107708806,LOC107571115,LOC107549066 coding upstream 159222 9761699 ~ 9764798 (-)
LOC122328653 phip coding upstream 165062 9767539 ~ 9798417 (-)
G155979 NA non-coding downstream 413065 9188513 ~ 9188897 (-)
G155968 NA non-coding downstream 448460 9153080 ~ 9153502 (-)
LOC122329247 NA non-coding downstream 529018 9070384 ~ 9072944 (-)
G155933 NA non-coding downstream 972859 8628699 ~ 8629103 (-)
G155825 NA non-coding downstream 976320 8624926 ~ 8625642 (-)
G156054 NA non-coding upstream 5011 9607488 ~ 9607948 (-)
G156056 NA non-coding upstream 9773 9612250 ~ 9612596 (-)
G156235 NA non-coding upstream 75784 9678261 ~ 9815494 (-)
G156245 NA non-coding upstream 179631 9782108 ~ 9831125 (-)
LOC122328702 NA non-coding upstream 265443 9867920 ~ 9877168 (-)
ccdc187 LOC107708822,LOC107570908,LOC107718813,LOC107656553,LOC107695760,LOC107586514 other downstream 391998 9195310 ~ 9209964 (-)
ctnnbip1 ctnnbip1 other downstream 504660 9079532 ~ 9097302 (-)
sst6 LOC107681964,LOC107571825,LOC107695779,LOC107570713,LOC107681961 other downstream 675211 8921564 ~ 8926751 (-)
c23h1orf127 LOC107708840,LOC107570680 other downstream 682192 8913062 ~ 8919770 (-)
G155827 NA other downstream 973571 8625758 ~ 8628391 (-)
hmgn3 hmgn3,LOC107756386,LOC107671890 other upstream 199308 9801785 ~ 9808369 (-)
zgc:153284 LOC107701733,LOC107571300,LOC107756391,LOC107549061,LOC107708783 other upstream 229332 9831809 ~ 9833682 (-)
ankrd52a ankrd52a,ankrd52,LOC107594018,LOC107756410,LOC107549041,LOC108432261,LOC107671831,LOC107723718 other upstream 615996 10218473 ~ 10385967 (-)
LOC122329224 NA other upstream 753464 10355941 ~ 10359786 (-)
LOC122328779 taf8,LOC107723763,LOC107756368,LOC107549030,LOC107671856,LOC107594013,LOC107701755 other upstream 761428 10363905 ~ 10367369 (-)

Expression


Co-expression Network