G156341


Basic Information

Item Value
gene id G156341
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 10348141 ~ 10351881 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU231535
CTGCGTTTGCTATAAACACCAAGCACATACGTCTCCTTGAGAACTCTGAAGTAATAATTCTGTTCACATATTCAACATGCCGGGGCAAAAGCTAAGCTCGATCATTTTGCTGCTTCTTCTGTGTCAATGTGctTTTGCGGGGGAAGAACCACAGAGAGCAGTGGCCTGCGAAAAAGAAAATGTCCTCCTCAGCTGTCATTTTGGATTGATGATAAGGGTCATTACTGCCAACTACGGGAGAACTAATCACTGGACATGCACTAAAAGGAAACCAAAACGTAAAATCTCAAATACAGCATGCATCCTAGAATCATCTGCCTTGATGTCCCGGTGgtgtgataaaaaaaatagctgttCTGTTCCTGCAAAGAACTGGCTTTTCTCCGATCCCTGCCGTGGGACTTATAAATACCTGAATGTGAGTTACGTCTGCGAATAAAGatgCATTTTGTGACTAAGCCATcacattaatgtattttaatgatcGCGtgaacaaatgaaaatgaagaaaagtaaaatgtttcaaaaagcaATGTAATGTCCAGGCACTTTAGAGATGCTTTAGAAATGGAATAATcgattatttttttcatgcctgtttttttttttcatttagtttgaggtgattttttttatgggATTCTCTCTGTTAAACACTCTGAATATCTGTTCAATAAATCTGTTGAATCGGTTTATCTACATGAATGTATGCAACTATACAGTTGTtgaacagaaaaatgtataaacgaAATAAAACAGCATCACTTAAAACCGCATCAAATTCTTTCATCAGAATTTACACAAAATTGcctttatgtctttttttctatttgttgtcTTGTAGCAGTTTTGTAAAAGTTTGAAACACTCAGTCACAACGGAAGaacatgcaaatatttgtaCCTTGGAGATCATGCTAAAATCAGTAATGTAGTTGCACAGGTTTGTTGCACAGTTTTTGATTGGTTCCACTTATGAGGGCTGATCATGCAGCTGTTTATCTCTCTGAAATCTGttcaaaagtcatttttgaccAAGTGTAGTTGTAGATACATGTAATCTCAAGGGTTCTACAAATAAAGACGAATTATTGCATTGTTTAGACATAAAATCTCTTGAGAAACATTGTCTGTGAAAAAAACTAGAAATAACTGAATAGAATTGTCATAGTGCCACAGTTGACATGTTTGTAGtcatttgtagttttttatATGGATTAGTCACTGattatttctttgtaaaacTAGCCCTTATTTTTCTGTTGGTGCTTCATCAGTTGTTAATGCGCATTTCTGGATCCCCGTATTCtggtttttgctatttttattgtaatacacGCGCTTAGTTTTGtatctaaaatgaataaatgctaatGCTGTAAGATTtttaggttacactttattttgatagtccactttagatattctgataactataaataatttttgattcTCAGTAATTTGCAAGTACATGTCTATTAACTCTCAGAGTGGACTGTTAGGTTAGgtgggtttagggttagtggtgttgtggacccatcaaagtaaagtgttagaggttattaagcagacagtccaTTAATACTCTAATGATTTATAGATTTAAAGTTACTGTTAATAGAACGTCTAAAGTGgtctgtcaaaataaagtgttaccgatttGATTATCAATTATTTCTATTGTGTCTATATTATTTGTGCTTTCTTtgcaatttttgttttggtttgctAAAAGCTGTAtgtttattgtgaataaaactCTACAAATACAATGCAGCTGAACTGAATGCAAGCTGGTTGAATAATCATGGCACTGAAGCTGGTTgccttcattatttatttattcatttttacactgCTGTGTGTTATCGTGAATTAAGCAAAAACTAATGAAAGAAACCATAGAGAATTAAAAGGATCTTTAAAGAAccttcacatttttttcaaaagatatttcattctctatttaaaaaattgaatcCCTTCTCACACACATCGATGCCTCTTTGACGTTTCATTTGTCAAATAAATTTTactaatcattaaaaaaaaagtattatcttttttatttgttttgcttgaAAAGTGCTACATTTCTATTGCAGTGccattaatagatttttaattaagtaTGGTTATGGATACATATAATATGGACAACCAACTTGTACGATACTAACTTGTGAATGTTCTACATATAAAACAACTGTAGATTTCAAAACCCTCTGCTTAGATAAACAATGAAGATCTCCtaagaaatataatttgctGCAAACTTGAAGTTTGCCTAAACAAAGAGCTGGATGAAGAAACACTTGAGGTCAAAGCTCGGCTATATAAGATCACACCCAGCTCTCAGAGAAAGatgcttttgcatgcattgTAGTTTATACAGGTCGCAATATTAGAAGGCAATACAATAAGAAGTAGAATAAAGAAAGTGTTTTACAGAATCATGCTGCAATCCTTAAAATTTCATCATTCAAGAGGTTatgaactgtattttttattatctatctatacatTTGTTGACCATCTTACTTCATTATACACATTACTAGGTGAGTTTCTGTGACTGTAAGAGACTTCTGATTTGTCAGTTAAATAGAgcagtaaatgttaaaacatgctTATTTTACAAAACCACTGGGTTTATAATTACaactaaacattaaaatataaaaatataccaGTTTTCCATATTGAGTACGTACTGTTTTTGCGAATGACTCCGGAAGTCTTGCACAATCAAGTTACAAAATGGCTAATGGTTCTTTACACATAGTTTTTGGgtttgtgcataaaaatactGTCACAATTTTTGattctatataatttatatattctttaGTTAACTTATTTTCCTCACTTCACCTAGAAACACAAGTGGAGAAGCACAACCACTGTTAATATCACTCGCTTATTTCAAACGAAATCTCCTCAGCAGCTTTCAAAATGGCTTCCAATTGGTTCCTTTTTGAGGGTAGGGCTTTTGGGCAGTCTGGTAGGGGAGCCTTGAAGTACCTCTGGCCTCCTCTGAAAGACATGGGCACACATATTGGACAGTTGTGAATCTCCCCTCCTGTTGGTAGCCAGTGTGCAAGCTACAAACCGTAATCTTGGCAAGATGTCTTGTGGATGATGGGCAAATTAGATAAATCATGTAAACATCTGATAATAATGTCTTGGATTCATGAAGGTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU231535 True 3203 lncRNA 0.34 7 10348141 10351881

Neighbor

gene id symbol gene type direction distance location
LOC122328780 NA coding downstream 2049 10343250 ~ 10346092 (-)
LOC122328770 pifo coding downstream 67602 10243928 ~ 10280539 (-)
rnf41 rnf41,LOC107723732,LOC107756409 coding downstream 135714 10204039 ~ 10212427 (-)
dgkaa dgkaa,dgka,LOC107549042,LOC107671885,LOC107701752,LOC107594021,LOC107756407 coding downstream 145334 10177186 ~ 10202807 (-)
tamalin grasp,LOC107723769,LOC107594022,LOC107549045,LOC107671830 coding downstream 172099 10162782 ~ 10176042 (-)
LOC122328599 LOC107570968,LOC107656538,LOC107708815,LOC107756373,LOC107701716,LOC107586510 coding upstream 80883 10432764 ~ 10447218 (-)
LOC122329230 dnajc11a,LOC107708818,LOC107701714,LOC107756372,LOC107586512,LOC107656549,LOC108433830 coding upstream 97604 10449485 ~ 10456918 (-)
LOC122328445 zgc:173570,LOC107657062,LOC107559474,LOC107747974 coding upstream 164835 10516716 ~ 10521072 (-)
LOC122328446 LOC107707743,LOC107671949,LOC107657006,LOC107603135,LOC107559475 coding upstream 170217 10522098 ~ 10525372 (-)
LOC122328736 LOC107672006,LOC107603149,LOC107707753,LOC107657067 coding upstream 216684 10568565 ~ 10582430 (-)
LOC122328389 NA non-coding downstream 54098 10291465 ~ 10294043 (-)
G156313 NA non-coding downstream 231186 10112617 ~ 10116955 (-)
G156283 NA non-coding downstream 288838 10058011 ~ 10059303 (-)
G156278 NA non-coding downstream 294592 10052526 ~ 10053549 (-)
G156264 NA non-coding downstream 330720 10016456 ~ 10017421 (-)
G156364 NA non-coding upstream 35073 10386954 ~ 10388615 (-)
G156452 NA non-coding upstream 189018 10540899 ~ 10542887 (-)
G156459 NA non-coding upstream 316076 10667957 ~ 10675579 (-)
G156468 NA non-coding upstream 344571 10696452 ~ 10696677 (-)
G156469 NA non-coding upstream 346716 10698597 ~ 10700224 (-)
zgc:153284 LOC107701733,LOC107571300,LOC107756391,LOC107549061,LOC107708783 other downstream 514459 9831809 ~ 9833682 (-)
hmgn3 hmgn3,LOC107756386,LOC107671890 other downstream 539772 9801785 ~ 9808369 (-)
ccdc187 LOC107708822,LOC107570908,LOC107718813,LOC107656553,LOC107695760,LOC107586514 other downstream 1138177 9195310 ~ 9209964 (-)
ctnnbip1 ctnnbip1 other downstream 1250839 9079532 ~ 9097302 (-)
sst6 LOC107681964,LOC107571825,LOC107695779,LOC107570713,LOC107681961 other downstream 1421390 8921564 ~ 8926751 (-)
LOC122329224 NA other upstream 4060 10355941 ~ 10359786 (-)
LOC122328779 taf8,LOC107723763,LOC107756368,LOC107549030,LOC107671856,LOC107594013,LOC107701755 other upstream 12024 10363905 ~ 10367369 (-)
LOC122328798 fkbp1ab,fkbp1a,LOC107707744,LOC107657066,LOC107747971,LOC108435222,LOC107559476,LOC100705189,LOC105013763,LOC101476936 other upstream 323799 10675680 ~ 10678150 (-)
G156746 NA other upstream 748863 11100744 ~ 11105223 (-)
LOC122328546 rpl10 other upstream 1389519 11741400 ~ 11746620 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_011733 zgc:113176 coding NC_007128.7 CM002901.2 49276061 ~ 49306686 (+)
grasscarp (Ctenopharyngodon idella) G230836 NA non-coding CI01000054 null 2804028 ~ 2806618 (+)
tiger barb (Puntius tetrazona) G176652 LOC107664115,LOC107714979,LOC107751829,LOC107697909,LOC107599510 non-coding NW_025047825.1 JAEQBD010000170.1 56362 ~ 58548 (+)