LOC122329224


Basic Information

Item Value
gene id LOC122329224
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 10355941 ~ 10359786 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU231551
tcGGAAAATACTTTATGACCAGTCAAAGATAACAAAATGACATCTACAGATCAAAAGGCCAAGGATATGGAAATAATTCCTACGTTTAGTATAACAAGAGCCGAAGATGAAGCTGAAAAATGACTGCCTGCCGCATTGAGACTCCCTTTATTCCTCACTGCCATTACCCACACACATTTagatggtcttttttttttgagcagcagcAATACAAAAGTCTTGCTGTAGATTTGCTTGTTCTGGTGAGCATTTTCTCAATCTCTTTACTTGCTTCAAAGCAGCAGCAACATGCAGATCGATTCAGCTGAGACCACAAATATTACCCCCGCCTTGTCATATTACCCCATACCACGCCAATATCCTAGAGTTGTCATGATAGAACTGTGTTGATATAACGCCATATTTTGGAAAACTCTTTGCCCAGGGATGACCAGAGAACGTGGTCTTGAGAAGTTCTGGAAATGTGAACGCACAAAATCATACTTTACCTCAACAGGAACATGTGAACATGTGTCTTCGTCAGACATCTGTTGTTCTTCTGTTCACGCATTCAACGTGCTGGTGCTAAAGCTAAGTTGTATCATTTTGCTGGTCTTCCTGTGTCAGTATGGTGAGAATGGCAGTTTActaatgtgtaattaaataaaaaaagatctgaAGAAAGATCTGTGCGCCTCAGCTGTACTTTGGGATTGATAAAGGTGATTAAAGCCAACTACGGGCGGACTGATCGCACAACATGCGCAAGTGGGAAACCAGCTCATCAGACCTCAAACATACGCTGCGTTCGAGGATCATACCTCCGTACAATGTCCACTCGGTGTGATGGAAGAAAGAGCTGTTCTGTTCCAGCAGTGAACTCAGTTTTCTCTGATCCTTGTGTTGGCACTTTTAAATACCTGGAGGTGCATTACGTCTGTGTCAGaaaagATGCATTGCGAATAAACCAAATAAGTGCATCAGATTCTGTACTCCCTGATCCCGTCACGGCGTCTATATAGTACCTGGAAATGATGTAACTGTGTAGAATTTAGTGACTACTATGTCATGCAAATgtagtatttgtgtgtgtgtgtgtgtaaaaaaggAAACAGATAATAACATTAtagataataaaatgtattttttaaatctcttttagACCCTCTGTAAGATATATCTGTTAGACACACTTATATTTGCATGAATGTGTAAAACTATAAGCTGTTGAACATTaaagtgcataaaaaataaaac
>XM_043225415.1
TCTATAGTCAACAGGTGGTGATGGATCTTGTTATAAATACCGTCAGCACATGAACGTAACTTTACATAAGAAAACAAGATCTATCCACATCTATCCAATCTACCATGGTGGCGCAAAAGCTAAGCTGGATCACTTTGCTGCTGTTGCTGTGTCAGCATGCATGTTTCCTCTCTGCAAGAAGAGCAAAAACATCCCTGGTTTGTGAAGGAGGGTCTGCACACCTCAGCTGTGATGTGGGATACATACATGTCGTTTCTGCTAACTATGGGCGGACTGATCACAAAACGTGCTCTGTTGGAAGACCATTTAAGCAGCTCTCAAATAATCACTGCTTTGAAGAAACATCTCGCCGTACGATGACTGTTAGgtgtaatggaaaaaaaagatgttccGTTTTTGCAGTTAACTCTGTTTTCTCTGATCCTTGTCCTTGGACTTATAAATACTTGCAAGTGTCTTATGAGTGTCACCCACAGAGACACAGCATAGCTTGTGAAGGTACCAGAAGTGTCATTGGCTGTGagaAGGGTGTTATTTCTGTTCATCATGCCAATTATGGACGACGGGATCTTGGAATCTGCCCTAATAGATTTGTAACTAGATCAGACTGTTACTTTAGTCAGACTTCCAGTCTGCGTTCCAGGTGCGACGGAAAGACCTCTTGTCATGTCGATGCGTCAAATTCGGTGTTCTCTGACCCATGTCACCATGTCTATAAGTACCTGGAAGTGACATACTCCTGCATATTGCTGGTCTTCCTGTGTCAGTATGCTTTGGGATTGATAAAGGTGATTAAAGCCAACTACGGGCGGACTGATCGCACAACATGCGCAAGTGGGAAACCAGCTCATCAGACCTCAAACATACGCTGCGTTCGAGGATCATACCTCCGTACAATGTCCACTCGGTGTGATGGAAGAAAGAGCTGTTCTGTTCCAGCAGTGAACTCAGTTTTCTCTGATCCTTGTGTTGGCACTTTTAAATACCTGGAGGTGCATTACGTCTGTGTCAGaaaagATGCATTGCGAATAAACCAAATAAGTGCATCAGATTCTGTACTCCCTGATCCCGTCACGGCGTCTATATAGTACCTGGAAATGATGTAACTGTGTAGAATTTAGTGACTACTATGTCATGCAAATgtagtatttgtgtgtgtgtgtgtgtaaaaaaggAAACAGATAATAACATTAtagataataaaatgtattttttaaatctcttttagACCCTCTGTAAGATATATCTGTTAGACACACTTATATTTGCATGAATGTGTAAAACTATAAGCTGTTGAACATTaaagtgcataaaaaataaaacaccatcCACTCTG

Function

GO:

id name namespace
GO:0006950 response to stress biological_process

KEGG:

id description
ko03060 Protein export
ko03070 Bacterial secretion system
ko02024 Quorum sensing

RNA

RNA id representative length rna type GC content exon number start site end site
TU231551 False 1236 lncRNA 0.39 5 10355954 10357617
XM_043225415.1 True 1336 mRNA 0.42 12 10355941 10359786

Neighbor

gene id symbol gene type direction distance location
LOC122328780 NA coding downstream 9849 10343250 ~ 10346092 (-)
LOC122328770 pifo coding downstream 75402 10243928 ~ 10280539 (-)
rnf41 rnf41,LOC107723732,LOC107756409 coding downstream 143514 10204039 ~ 10212427 (-)
dgkaa dgkaa,dgka,LOC107549042,LOC107671885,LOC107701752,LOC107594021,LOC107756407 coding downstream 153134 10177186 ~ 10202807 (-)
tamalin grasp,LOC107723769,LOC107594022,LOC107549045,LOC107671830 coding downstream 179899 10162782 ~ 10176042 (-)
LOC122328599 LOC107570968,LOC107656538,LOC107708815,LOC107756373,LOC107701716,LOC107586510 coding upstream 72978 10432764 ~ 10447218 (-)
LOC122329230 dnajc11a,LOC107708818,LOC107701714,LOC107756372,LOC107586512,LOC107656549,LOC108433830 coding upstream 89699 10449485 ~ 10456918 (-)
LOC122328445 zgc:173570,LOC107657062,LOC107559474,LOC107747974 coding upstream 156930 10516716 ~ 10521072 (-)
LOC122328446 LOC107707743,LOC107671949,LOC107657006,LOC107603135,LOC107559475 coding upstream 162312 10522098 ~ 10525372 (-)
LOC122328736 LOC107672006,LOC107603149,LOC107707753,LOC107657067 coding upstream 208779 10568565 ~ 10582430 (-)
G156341 NA non-coding downstream 4060 10348141 ~ 10351881 (-)
LOC122328389 NA non-coding downstream 61898 10291465 ~ 10294043 (-)
G156313 NA non-coding downstream 238986 10112617 ~ 10116955 (-)
G156283 NA non-coding downstream 296638 10058011 ~ 10059303 (-)
G156278 NA non-coding downstream 302392 10052526 ~ 10053549 (-)
G156364 NA non-coding upstream 27168 10386954 ~ 10388615 (-)
G156452 NA non-coding upstream 181113 10540899 ~ 10542887 (-)
G156459 NA non-coding upstream 308171 10667957 ~ 10675579 (-)
G156468 NA non-coding upstream 336666 10696452 ~ 10696677 (-)
G156469 NA non-coding upstream 338811 10698597 ~ 10700224 (-)
zgc:153284 LOC107701733,LOC107571300,LOC107756391,LOC107549061,LOC107708783 other downstream 522259 9831809 ~ 9833682 (-)
hmgn3 hmgn3,LOC107756386,LOC107671890 other downstream 547572 9801785 ~ 9808369 (-)
ccdc187 LOC107708822,LOC107570908,LOC107718813,LOC107656553,LOC107695760,LOC107586514 other downstream 1145977 9195310 ~ 9209964 (-)
ctnnbip1 ctnnbip1 other downstream 1258639 9079532 ~ 9097302 (-)
sst6 LOC107681964,LOC107571825,LOC107695779,LOC107570713,LOC107681961 other downstream 1429190 8921564 ~ 8926751 (-)
LOC122328779 taf8,LOC107723763,LOC107756368,LOC107549030,LOC107671856,LOC107594013,LOC107701755 other upstream 4119 10363905 ~ 10367369 (-)
LOC122328798 fkbp1ab,fkbp1a,LOC107707744,LOC107657066,LOC107747971,LOC108435222,LOC107559476,LOC100705189,LOC105013763,LOC101476936 other upstream 315894 10675680 ~ 10678150 (-)
G156746 NA other upstream 740958 11100744 ~ 11105223 (-)
LOC122328546 rpl10 other upstream 1381614 11741400 ~ 11746620 (-)
LOC122329329 NA other upstream 1385476 11745262 ~ 11745395 (-)

Expression


Co-expression Network