G156387 (LOC107747988,LOC107671949,LOC107707743,LOC107603135)


Basic Information

Item Value
gene id G156387
gene name LOC107747988,LOC107671949,LOC107707743,LOC107603135
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 10520142 ~ 10520767 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU231605
TCTGGGATTCTTAAGCAAGTTACGTCGTTTCCTAGTTAAGAAGTAAAACAAGCGCCAGTCGTCTGGCAGTCTGGAAGCATCACACGGCTGGATCCTCTCTCTCCGGCAGCGCTCTCTCCAGTGTGCAGCACTGTCCACCAGCTCCTTCCACTCGTGACACACCAGACGACAGACTCGCACCACCTGATGAGCGGGCAGCTTCAGGAGGATCTCCTCAACCACAGCTAGAGGAACATCTACCTGCAGACCCGAGCACTGACAGAGGAACAGACAAATCACTTTCTCATCCACCTGTGGTTCCTGCTTGCTGGTTCTTAGCTGTGCTGGTCATCAGCTAGCATGTTCCTCCCCCTGACCATTTTAACAAGGACATCTGACTGATGTAAGTCACCTTTCTGGACCTGCGTGT

Function

NR:

description
PREDICTED: sodium-dependent lysophosphatidylcholine symporter 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU231605 True 409 lncRNA 0.53 2 10520142 10520767

Neighbor

gene id symbol gene type direction distance location
LOC122329231 LOC107656551,LOC107708819,LOC107570956 coding upstream 70811 10447808 ~ 10449331 (+)
LOC122328600 pcmtd2,LOC107708816,LOC107570992,LOC107701717,LOC107756374,LOC107656550,LOC108433859 coding upstream 87639 10429277 ~ 10432503 (+)
LOC122329277 ankrd52a,ankrd52,LOC107594018,LOC107756410,LOC107549041,LOC108432261,LOC107671831 coding upstream 138752 10368453 ~ 10381390 (+)
LOC122329250 si:dkey-261h17.1 coding upstream 198135 10316085 ~ 10322007 (+)
LOC122329223 NA coding upstream 262914 10247911 ~ 10257228 (+)
LOC122328734 sdcbp2,LOC107657068,LOC107672005 coding downstream 34509 10555276 ~ 10566657 (+)
LOC122328564 LOC107707753,LOC107672006,LOC107603149,LOC107657067,LOC107559477,LOC107747970 coding downstream 126196 10646963 ~ 10658747 (+)
commd7 commd7,LOC107671961,LOC107603136,LOC107747977,LOC107719919,LOC107563668 coding downstream 245095 10765862 ~ 10772199 (+)
nol4lb nol4lb,nol4l,LOC107672011,LOC107563666,LOC107657055 coding downstream 266117 10786884 ~ 10870751 (+)
srms zgc:194282,srms,LOC107672012,LOC107560891,LOC107657057,LOC107747981,LOC108435233,LOC108276248,LOC107563676 coding downstream 354057 10874824 ~ 10884303 (+)
G156171 NA non-coding upstream 131516 10387868 ~ 10388626 (+)
G156169 NA non-coding upstream 132642 10386960 ~ 10387500 (+)
G156217 NA non-coding upstream 174088 10263990 ~ 10346054 (+)
LOC122328771 NA non-coding upstream 263736 10254786 ~ 10256406 (+)
G156182 grasp,LOC107671830,LOC107723769,LOC107594022,LOC107549045 non-coding upstream 356166 10161998 ~ 10163976 (+)
G156401 NA non-coding downstream 52447 10573214 ~ 10655710 (+)
G156398 NA non-coding downstream 146094 10666861 ~ 10674148 (+)
G156413 NA non-coding downstream 175535 10696302 ~ 10696558 (+)
G156417 NA non-coding downstream 181962 10702729 ~ 10703093 (+)
G156431 NA non-coding downstream 206151 10726918 ~ 10727164 (+)
LOC122328447 LOC107603155,LOC107707751,LOC107672009 other upstream 1391 10514979 ~ 10518751 (+)
LOC122328383 tbx15,tbx18,LOC107712261,LOC107708785,LOC107656541 other upstream 92980 10415663 ~ 10427162 (+)
LOC122328781 pifo other upstream 156324 10329851 ~ 10363818 (+)
plagx plagx,LOC107723745,LOC107572778,LOC107756402,LOC107671865,LOC107549050,LOC107701746 other upstream 430324 10070780 ~ 10089818 (+)
G156081 phip,LOC107656532,LOC107708770,LOC107549027 other upstream 750522 9683746 ~ 9769620 (+)
LOC122329061 fkbp1ab,fkbp1a,LOC107707744,LOC107657066,LOC107747971,LOC108435222,LOC107559476,LOC100705189,LOC105013763,LOC101476936 other downstream 30330 10551097 ~ 10554720 (+)
G156399 LOC107707753,LOC107672006,LOC107603149 other downstream 42577 10563344 ~ 10572246 (+)
G156414 LOC107707743,LOC107747988,LOC107671949,LOC107559475 other downstream 178031 10698798 ~ 10700895 (+)
G156497 trim101,LOC107671958,LOC107560876,LOC107719918,LOC107656995,LOC107747989 other downstream 393137 10913904 ~ 10923988 (+)
LOC122328437 LOC107737657,LOC107560901,LOC107671993,LOC108435244,LOC108275530 other downstream 556387 11077154 ~ 11085604 (+)

Expression


Co-expression Network